Displaying data sets 157301 - 157400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G19440 KCS4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-5 95 10 90.48% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19440 KCS4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.7143 x 10-2 57 11 30 73 83.82% 70.87% 68 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.216134'
Avg. expression score for this sample: '444.9'
Avg. expression score in LCM sample: '499.744'
Tissue used: 'full endosperm'
AT1G19430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 788 105 158 1055 88.24% 86.97% 893 1213 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '492.57'
Avg. expression score in LCM sample: '84.366'
Tissue used: 'full endosperm'
AT1G19430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1887 31 98.38% 1918 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 915 27 97.13% 942 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9171 x 10-2 174 22 88.78% 196 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 139 149 71 80 48.26% 52.98% 288 151 TAIR8 Avg. embryo expression (dissected): '248.544'
Avg. embryo expression (LCM): '121.504'
AT1G19430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.7808 x 10-2 315 123 149 333 71.92% 69.09% 438 482 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '269.365'
Avg. expression score in LCM sample: '84.366'
Tissue used: 'pure endosperm, no chalazal'
AT1G19410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '1.13174'
Tissue used: 'pure endosperm, no chalazal'
AT1G19410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '1.13174'
Tissue used: 'full endosperm'
AT1G19410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G19410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.1 x 10-5 8 37 17.78% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.1002 x 10-2 40 11 5 1 78.43% 16.67% 51 6 TAIR8 Avg. embryo expression (dissected): '463.054'
Avg. embryo expression (LCM): '247.404'
AT1G19400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.52184 x 10-1 47 3 35 10 94.00% 22.22% 50 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.9e-10'
Avg. expression score for this sample: '463.023'
Avg. expression score in LCM sample: '89.1576'
Tissue used: 'pure endosperm, no chalazal'
AT1G19400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6 x 10-10 148 16 215 42 90.24% 16.34% 164 257 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.9e-10'
Avg. expression score for this sample: '555.275'
Avg. expression score in LCM sample: '89.1576'
Tissue used: 'full endosperm'
AT1G19400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 254 11 95.85% 265 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.4 x 10-5 45 106 29.80% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19397 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.31309 x 10-1 25 2 92.59% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19397 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.805 x 10-2 159 10 94.08% 169 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19397 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.51 x 10-4 73 0 9 1 100.00% 10.00% 73 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000249'
Avg. expression score for this sample: '123.754'
Avg. expression score in LCM sample: '37.4797'
Tissue used: 'full endosperm'
AT1G19397 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0909 x 10-2 6 0 0 0 100.00% 6 0 TAIR8 Avg. embryo expression (dissected): '34.3232'
Avg. embryo expression (LCM): '43.8294'
AT1G19397 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.28813 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19397 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0954 x 10-1 38 0 9 3 100.00% 25.00% 38 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000249'
Avg. expression score for this sample: '103.754'
Avg. expression score in LCM sample: '37.4797'
Tissue used: 'pure endosperm, no chalazal'
AT1G19394 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19394 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19394 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19394 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19394 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19394 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G19390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G19390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.759266'
Avg. expression score in LCM sample: '3.11596'
Tissue used: 'pure endosperm, no chalazal'
AT1G19390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.294464'
Avg. expression score in LCM sample: '3.11596'
Tissue used: 'full endosperm'
AT1G19380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.25023 x 10-1 22 6 16 31 78.57% 65.96% 28 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.615886'
Avg. expression score for this sample: '295.832'
Avg. expression score in LCM sample: '43.5499'
Tissue used: 'full endosperm'
AT1G19380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8957 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.8957 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '49.7164'
Avg. embryo expression (LCM): '3.71734'
AT1G19380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 1 2 80.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.615886'
Avg. expression score for this sample: '316.818'
Avg. expression score in LCM sample: '43.5499'
Tissue used: 'pure endosperm, no chalazal'
AT1G19376 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19376 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19376 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19376 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19376 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G19376 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19373 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19373 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G19373 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19373 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19373 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19373 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19371 MIR169H endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19371 MIR169H endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19371 MIR169H endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19371 MIR169H embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G19371 MIR169H endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19371 MIR169H endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.70876 x 10-1 87 41 38 91 67.97% 70.54% 128 129 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000277'
Avg. expression score for this sample: '78.1913'
Avg. expression score in LCM sample: '69.0802'
Tissue used: 'pure endosperm, no chalazal'
AT1G19370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5 x 10-5 97 27 55 228 78.23% 80.57% 124 283 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000277'
Avg. expression score for this sample: '116.927'
Avg. expression score in LCM sample: '69.0802'
Tissue used: 'full endosperm'
AT1G19370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-5 247 35 87.59% 282 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-5 190 23 89.20% 213 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.39602 x 10-1 24 10 70.59% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.79932 x 10-1 99 68 24 16 59.28% 40.00% 167 40 TAIR8 Avg. embryo expression (dissected): '99.1901'
Avg. embryo expression (LCM): '64.8148'
AT1G19360 RRA3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 13 12 3 4 52.00% 57.14% 25 7 TAIR8 Avg. embryo expression (dissected): '62.2165'
Avg. embryo expression (LCM): '55.4336'
AT1G19360 RRA3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.90661 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19360 RRA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.48743 x 10-1 25 4 6 12 86.21% 66.67% 29 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100327'
Avg. expression score for this sample: '62.0302'
Avg. expression score in LCM sample: '41.5951'
Tissue used: 'pure endosperm, no chalazal'
AT1G19360 RRA3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.87211 x 10-1 55 13 80.88% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19360 RRA3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-5 74 2 97.37% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19360 RRA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.32242 x 10-1 37 12 15 42 75.51% 73.68% 49 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100327'
Avg. expression score for this sample: '89.3985'
Avg. expression score in LCM sample: '41.5951'
Tissue used: 'full endosperm'
AT1G19350 BES1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.97559 x 10-1 67 28 44 58 70.53% 56.86% 95 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688283'
Avg. expression score for this sample: '1345.73'
Avg. expression score in LCM sample: '1953.41'
Tissue used: 'full endosperm'
AT1G19350 BES1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.31575 x 10-1 23 7 76.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19350 BES1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.02536 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19350 BES1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.78017 x 10-1 10 4 71.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19350 BES1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 8 11 1 1 42.11% 50.00% 19 2 TAIR8 Avg. embryo expression (dissected): '747.529'
Avg. embryo expression (LCM): '422.219'
AT1G19350 BES1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 66 23 26 33 74.16% 55.93% 89 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688283'
Avg. expression score for this sample: '2543.12'
Avg. expression score in LCM sample: '1953.41'
Tissue used: 'pure endosperm, no chalazal'
AT1G19340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 0 33.33% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '6.94126'
Avg. expression score in LCM sample: '9.1715'
Tissue used: 'pure endosperm, no chalazal'
AT1G19340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.64861 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 3 5 50.00% 62.50% 2 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '15.4018'
Avg. expression score in LCM sample: '9.1715'
Tissue used: 'full endosperm'
AT1G19340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '6.25468'
Avg. embryo expression (LCM): '3.13964'
AT1G19340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.58358 x 10-1 26 9 74.29% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.18245 x 10-1 7 18 0 3 28.00% 100.00% 25 3 TAIR8 Avg. embryo expression (dissected): '104.406'
Avg. embryo expression (LCM): '49.7068'
AT1G19330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 38 27 15 50 58.46% 76.92% 65 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.605975'
Avg. expression score for this sample: '306.974'
Avg. expression score in LCM sample: '72.4166'
Tissue used: 'pure endosperm, no chalazal'
AT1G19330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.06138 x 10-1 132 88 57 128 60.00% 69.19% 220 185 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.605975'
Avg. expression score for this sample: '417.586'
Avg. expression score in LCM sample: '72.4166'
Tissue used: 'full endosperm'
AT1G19330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.59606 x 10-1 17 5 77.27% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4921 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.58331 x 10-1 55 29 65.48% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.179168'
Avg. expression score for this sample: '15.5268'
Avg. expression score in LCM sample: '644.533'
Tissue used: 'full endosperm'
AT1G19320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.49606'
Avg. embryo expression (LCM): '0'
AT1G19320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.49482 x 10-1 1 2 6 5 33.33% 45.45% 3 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.179168'
Avg. expression score for this sample: '89.3657'
Avg. expression score in LCM sample: '644.533'
Tissue used: 'pure endosperm, no chalazal'
AT1G19310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12.1718'
Avg. expression score in LCM sample: '2.822'
Tissue used: 'pure endosperm, no chalazal'
AT1G19310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.359'
Avg. expression score in LCM sample: '2.822'
Tissue used: 'full endosperm'