Displaying data sets 157101 - 157200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G19770 PUP14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-13 68 18 15 232 79.07% 93.93% 86 247 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.1e-13'
Avg. expression score for this sample: '972.011'
Avg. expression score in LCM sample: '53.7797'
Tissue used: 'full endosperm'
AT1G19770 PUP14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.96107 x 10-1 15 8 5 2 65.22% 28.57% 23 7 TAIR8 Avg. embryo expression (dissected): '403.07'
Avg. embryo expression (LCM): '50.4478'
AT1G19770 PUP14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0282 x 10-2 281 21 93.05% 302 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19770 PUP14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.4422 x 10-1 147 15 90.74% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Avg. embryo expression (dissected): '16.9791'
Avg. embryo expression (LCM): '6.53046'
AT1G19750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.07143 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '20.5781'
Avg. expression score in LCM sample: '7.64292'
Tissue used: 'pure endosperm, no chalazal'
AT1G19750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '10.0643'
Avg. expression score in LCM sample: '7.64292'
Tissue used: 'full endosperm'
AT1G19750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '114.584'
Avg. expression score in LCM sample: '69.8004'
Tissue used: 'full endosperm'
AT1G19740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '171.839'
Avg. embryo expression (LCM): '144.7'
AT1G19740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '117.743'
Avg. expression score in LCM sample: '69.8004'
Tissue used: 'pure endosperm, no chalazal'
AT1G19730 ATTRX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '140.914'
Avg. expression score in LCM sample: '22.87'
Tissue used: 'pure endosperm, no chalazal'
AT1G19730 ATTRX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '231.245'
Avg. expression score in LCM sample: '22.87'
Tissue used: 'full endosperm'
AT1G19730 ATTRX4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19730 ATTRX4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '130.511'
Avg. embryo expression (LCM): '122.572'
AT1G19730 ATTRX4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19730 ATTRX4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.62361 x 10-1 22 9 70.97% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1433 x 10-2 98 39 22 10 71.53% 31.25% 137 32 TAIR8 Avg. embryo expression (dissected): '510.618'
Avg. embryo expression (LCM): '338.642'
AT1G19720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2954 x 10-1 50 22 69.44% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.90977 x 10-1 56 19 25 19 74.67% 43.18% 75 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.462238'
Avg. expression score for this sample: '220.98'
Avg. expression score in LCM sample: '111.66'
Tissue used: 'pure endosperm, no chalazal'
AT1G19720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.18782 x 10-1 10 7 58.82% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.90832 x 10-1 165 43 90 78 79.33% 46.43% 208 168 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.462238'
Avg. expression score for this sample: '421.415'
Avg. expression score in LCM sample: '111.66'
Tissue used: 'full endosperm'
AT1G19715 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.13889 x 10-1 116 54 47 106 68.24% 69.28% 170 153 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.291467'
Avg. expression score for this sample: '133.933'
Avg. expression score in LCM sample: '35.3044'
Tissue used: 'full endosperm'
AT1G19715 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1269 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19715 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.78331 x 10-1 41 16 71.93% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19715 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.96958 x 10-1 22 11 66.67% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19715 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.63057 x 10-1 94 71 39 34 56.97% 46.58% 165 73 TAIR8 Avg. embryo expression (dissected): '261.173'
Avg. embryo expression (LCM): '100.569'
AT1G19715 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.04572 x 10-1 63 23 16 42 73.26% 72.41% 86 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.291467'
Avg. expression score for this sample: '109.719'
Avg. expression score in LCM sample: '35.3044'
Tissue used: 'pure endosperm, no chalazal'
AT1G19710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.76471 x 10-1 4 1 0 4 80.00% 100.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007563'
Avg. expression score for this sample: '82.8321'
Avg. expression score in LCM sample: '59.747'
Tissue used: 'pure endosperm, no chalazal'
AT1G19710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6859 x 10-2 6 2 2 30 75.00% 93.75% 8 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007563'
Avg. expression score for this sample: '105.736'
Avg. expression score in LCM sample: '59.747'
Tissue used: 'full endosperm'
AT1G19710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '42.0975'
Avg. embryo expression (LCM): '34.2724'
AT1G19710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7587 x 10-2 44 0 100.00% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.33013 x 10-1 50 4 92.59% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19700 BEL10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.75337 x 10-1 820 15 98.20% 835 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19700 BEL10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 28 15 17 6 65.12% 26.09% 43 23 TAIR8 Avg. embryo expression (dissected): '31.1648'
Avg. embryo expression (LCM): '21.1738'
AT1G19700 BEL10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5 x 10-7 2220 7 99.69% 2227 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19700 BEL10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.4 x 10-14 89 1 0 38 98.89% 100.00% 90 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.0881'
Avg. expression score in LCM sample: '5.83507'
Tissue used: 'pure endosperm, no chalazal'
AT1G19700 BEL10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 781 12 17 571 98.49% 97.11% 793 588 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '226.72'
Avg. expression score in LCM sample: '5.83507'
Tissue used: 'full endosperm'
AT1G19700 BEL10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 155 3 98.10% 158 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.2337 x 10-2 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.01977 x 10-1 34 11 11 21 75.56% 65.62% 45 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.391454'
Avg. expression score for this sample: '27.6476'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.35 x 10-4 25 0 100.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.83434 x 10-1 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.081 x 10-3 19 68 8 10 21.84% 55.56% 87 18 TAIR8 Avg. embryo expression (dissected): '65.7416'
Avg. embryo expression (LCM): '59.4272'
AT1G19690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.01977 x 10-1 13 21 1 42 38.24% 97.67% 34 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.391454'
Avg. expression score for this sample: '29.9876'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 0 5 0 100.00% 0.00% 9 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.717528'
Avg. expression score for this sample: '69.6007'
Avg. expression score in LCM sample: '47.3567'
Tissue used: 'pure endosperm, no chalazal'
AT1G19680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.39669 x 10-1 23 5 15 10 82.14% 40.00% 28 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.717528'
Avg. expression score for this sample: '97.4371'
Avg. expression score in LCM sample: '47.3567'
Tissue used: 'full endosperm'
AT1G19680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.93066 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31857 x 10-1 7 2 8 0 77.78% 0.00% 9 8 TAIR8 Avg. embryo expression (dissected): '113.277'
Avg. embryo expression (LCM): '57.9076'
AT1G19680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.264 x 10-3 72 12 85.71% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.07 x 10-4 43 79 35.25% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19670 CLH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19670 CLH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '96.4373'
Avg. embryo expression (LCM): '59.8919'
AT1G19670 CLH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19670 CLH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.62783'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19670 CLH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19670 CLH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.57875'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.84941 x 10-1 52 24 22 69 68.42% 75.82% 76 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.213137'
Avg. expression score for this sample: '301.702'
Avg. expression score in LCM sample: '25.1775'
Tissue used: 'full endosperm'
AT1G19660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.64539 x 10-1 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9459 x 10-2 28 2 93.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.94 x 10-4 25 0 100.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '53.6346'
Avg. embryo expression (LCM): '6.27929'
AT1G19660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.11194 x 10-1 9 3 1 5 75.00% 83.33% 12 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.213137'
Avg. expression score for this sample: '129.422'
Avg. expression score in LCM sample: '25.1775'
Tissue used: 'pure endosperm, no chalazal'
AT1G19650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.737428'
Avg. expression score for this sample: '9.25514'
Avg. expression score in LCM sample: '2.60153'
Tissue used: 'pure endosperm, no chalazal'
AT1G19650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.28282 x 10-1 4 2 6 5 66.67% 45.45% 6 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.737428'
Avg. expression score for this sample: '11.1671'
Avg. expression score in LCM sample: '2.60153'
Tissue used: 'full endosperm'
AT1G19650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 1 33.33% 50.00% 3 2 TAIR8 Avg. embryo expression (dissected): '10.9592'
Avg. embryo expression (LCM): '9.98407'
AT1G19650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.30435 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4013 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19640 JMT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.921 x 10-2 1335 7 99.48% 1342 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19640 JMT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.4 x 10-15 75 0 1 11 100.00% 91.67% 75 12 TAIR8 Avg. embryo expression (dissected): '40.396'
Avg. embryo expression (LCM): '3.16476'
AT1G19640 JMT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0557 x 10-2 8139 62 99.24% 8201 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19640 JMT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 469 5 5 170 98.95% 97.14% 474 175 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '255.11'
Avg. expression score in LCM sample: '29.6751'
Tissue used: 'pure endosperm, no chalazal'
AT1G19640 JMT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 154 2 3 245 98.72% 98.79% 156 248 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '110.14'
Avg. expression score in LCM sample: '29.6751'
Tissue used: 'full endosperm'
AT1G19640 JMT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.7872 x 10-2 233 0 100.00% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19630 CYP722A1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19630 CYP722A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19630 CYP722A1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 55 0 100.00% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19630 CYP722A1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19630 CYP722A1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G19630 CYP722A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.98425'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.39192'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.17386'
Avg. embryo expression (LCM): '0'
AT1G19620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19610 PDF1.4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19610 PDF1.4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G19610 PDF1.4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19610 PDF1.4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.16288'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19610 PDF1.4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19610 PDF1.4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.95746'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'