Displaying data sets 156901 - 157000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G20080 SYTB endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20080 SYTB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 3 100.00% 75.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.46191'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G20080 SYTB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20080 SYTB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.61686'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G20080 SYTB endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20080 SYTB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G20070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.3201'
Avg. embryo expression (LCM): '0'
AT1G20070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2584 x 10-2 33 2 94.29% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.56682 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8954 x 10-2 35 7 4 26 83.33% 86.67% 42 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.142375'
Avg. expression score for this sample: '72.307'
Avg. expression score in LCM sample: '1.32281'
Tissue used: 'full endosperm'
AT1G20070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.37073 x 10-1 10 7 58.82% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.24544 x 10-1 7 4 6 2 63.64% 25.00% 11 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.142375'
Avg. expression score for this sample: '115.113'
Avg. expression score in LCM sample: '1.32281'
Tissue used: 'pure endosperm, no chalazal'
AT1G20065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.70601'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G20065 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20065 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.3117'
Avg. embryo expression (LCM): '6.2165'
AT1G20065 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.12593'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G20065 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.28279 x 10-1 37 30 55.22% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4159 x 10-1 26 16 18 31 61.90% 63.27% 42 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.93933'
Avg. expression score in LCM sample: '14.5215'
Tissue used: 'full endosperm'
AT1G20060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.77684 x 10-1 19 6 9 21 76.00% 70.00% 25 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.03525'
Avg. expression score in LCM sample: '14.5215'
Tissue used: 'pure endosperm, no chalazal'
AT1G20060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.95298 x 10-1 26 20 10 13 56.52% 56.52% 46 23 TAIR8 Avg. embryo expression (dissected): '22.2383'
Avg. embryo expression (LCM): '18.6118'
AT1G20060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.16658 x 10-1 79 55 58.96% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20050 HYD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.60429 x 10-1 18 3 85.71% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20050 HYD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 6 4 2 50.00% 33.33% 12 6 TAIR8 Avg. embryo expression (dissected): '130.355'
Avg. embryo expression (LCM): '103.684'
AT1G20050 HYD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.18598 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20050 HYD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.27646 x 10-1 17 7 7 23 70.83% 76.67% 24 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.725813'
Avg. expression score for this sample: '141.974'
Avg. expression score in LCM sample: '62.1869'
Tissue used: 'full endosperm'
AT1G20050 HYD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.32 x 10-4 34 1 97.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20050 HYD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 2 6 3 84.62% 33.33% 13 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.725813'
Avg. expression score for this sample: '102.906'
Avg. expression score in LCM sample: '62.1869'
Tissue used: 'pure endosperm, no chalazal'
AT1G20040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G20040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G20040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.38691'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G20040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.0227 x 10-2 93 11 89.42% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5 x 10-5 18 5 15 118 78.26% 88.72% 23 133 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000023'
Avg. expression score for this sample: '38.1756'
Avg. expression score in LCM sample: '19.1661'
Tissue used: 'full endosperm'
AT1G20030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6 x 10-8 139 3 97.89% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.0189 x 10-2 69 37 13 89 65.09% 87.25% 106 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000023'
Avg. expression score for this sample: '53.6913'
Avg. expression score in LCM sample: '19.1661'
Tissue used: 'pure endosperm, no chalazal'
AT1G20030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.172 x 10-3 279 37 88.29% 316 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.38166 x 10-1 85 155 22 71 35.42% 76.34% 240 93 TAIR8 Avg. embryo expression (dissected): '153.087'
Avg. embryo expression (LCM): '69.1601'
AT1G20020 FNR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 131 142 22 32 47.99% 59.26% 273 54 TAIR8 Avg. embryo expression (dissected): '162.353'
Avg. embryo expression (LCM): '93.3981'
AT1G20020 FNR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.036 x 10-3 164 57 74.21% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20020 FNR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.20599 x 10-1 29 12 70.73% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20020 FNR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.89102 x 10-1 99 65 67 141 60.37% 67.79% 164 208 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.158764'
Avg. expression score for this sample: '107.109'
Avg. expression score in LCM sample: '29.7192'
Tissue used: 'full endosperm'
AT1G20020 FNR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.49186 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20020 FNR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.30238 x 10-1 83 69 17 42 54.61% 71.19% 152 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.158764'
Avg. expression score for this sample: '88.1447'
Avg. expression score in LCM sample: '29.7192'
Tissue used: 'pure endosperm, no chalazal'
AT1G20015 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.91379'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G20015 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20015 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '14.2665'
AT1G20015 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20015 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.05599'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G20015 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20010 TUB5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-10 61 0 100.00% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20010 TUB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.66897 x 10-1 14 7 21 37 66.67% 63.79% 21 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.510132'
Avg. expression score for this sample: '66.7681'
Avg. expression score in LCM sample: '40.9778'
Tissue used: 'full endosperm'
AT1G20010 TUB5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.55345 x 10-1 11 3 78.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20010 TUB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.90536 x 10-1 18 11 9 8 62.07% 47.06% 29 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.510132'
Avg. expression score for this sample: '113.005'
Avg. expression score in LCM sample: '40.9778'
Tissue used: 'pure endosperm, no chalazal'
AT1G20010 TUB5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.08197 x 10-1 102 60 23 15 62.96% 39.47% 162 38 TAIR8 Avg. embryo expression (dissected): '672.089'
Avg. embryo expression (LCM): '146.734'
AT1G20010 TUB5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9214 x 10-2 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20000 TAF11b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20000 TAF11b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 0 1 66.67% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '10.0673'
Avg. embryo expression (LCM): '10.2478'
AT1G20000 TAF11b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20000 TAF11b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.28925'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G20000 TAF11b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G20000 TAF11b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.85714 x 10-1 0 3 0 1 0.00% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.62793'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.3182 x 10-2 190 70 92 244 73.08% 72.62% 260 336 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012085'
Avg. expression score for this sample: '202.184'
Avg. expression score in LCM sample: '85.9681'
Tissue used: 'pure endosperm, no chalazal'
AT1G19990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.54373 x 10-1 156 187 52 40 45.48% 43.48% 343 92 TAIR8 Avg. embryo expression (dissected): '227.723'
Avg. embryo expression (LCM): '279.705'
AT1G19990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6855 x 10-2 543 280 65.98% 823 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.9 x 10-21 702 103 87.20% 805 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.45341 x 10-1 301 122 216 473 71.16% 68.65% 423 689 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012085'
Avg. expression score for this sample: '290.714'
Avg. expression score in LCM sample: '85.9681'
Tissue used: 'full endosperm'
AT1G19990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.368 x 10-3 75 14 84.27% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.41166 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 4 9 18 71.43% 66.67% 14 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.1478'
Avg. expression score in LCM sample: '4.80622'
Tissue used: 'full endosperm'
AT1G19980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.17283 x 10-1 31 12 72.09% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 2 100.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.0262'
Avg. expression score in LCM sample: '4.80622'
Tissue used: 'pure endosperm, no chalazal'
AT1G19980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.5741 x 10-2 39 7 84.78% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 0 1 50.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '21.8165'
Avg. embryo expression (LCM): '16.4266'
AT1G19970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 28 17 16 5 62.22% 23.81% 45 21 TAIR8 Avg. embryo expression (dissected): '240.935'
Avg. embryo expression (LCM): '192.937'
AT1G19970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.276 x 10-2 300 9 97.09% 309 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.62 x 10-4 427 8 98.16% 435 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6 x 10-9 82 9 6 86 90.11% 93.48% 91 92 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.7e-14'
Avg. expression score for this sample: '343.534'
Avg. expression score in LCM sample: '18.9309'
Tissue used: 'full endosperm'
AT1G19970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.8754 x 10-1 35 1 97.22% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9 x 10-5 44 4 1 32 91.67% 96.97% 48 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.7e-14'
Avg. expression score for this sample: '190.768'
Avg. expression score in LCM sample: '18.9309'
Tissue used: 'pure endosperm, no chalazal'
AT1G19968 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.42795'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19968 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19968 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.49564'
Avg. embryo expression (LCM): '1.73308'
AT1G19968 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19968 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.1527'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19968 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.64518'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.62851'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.80991'
Avg. embryo expression (LCM): '0'
AT1G19960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19950 HVA22H endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.47 x 10-4 49 52 48.51% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19950 HVA22H embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.6714 x 10-2 9 8 18 2 52.94% 10.00% 17 20 TAIR8 Avg. embryo expression (dissected): '194.48'
Avg. embryo expression (LCM): '48.5138'
AT1G19950 HVA22H endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19950 HVA22H endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.35117 x 10-1 2 1 1 7 66.67% 87.50% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170634'
Avg. expression score for this sample: '157.707'
Avg. expression score in LCM sample: '52.4128'
Tissue used: 'full endosperm'