GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G139837	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.83207 x 10^-2	108	76	104	69	58.70%	39.88%	184	173	RefGen V2	χ2 p-value for B73 x Mo17: '.0183207' χ2 p-value for Mo17 x B73: '.0077909' Biased in favor of strain: 'B73'
GRMZM2G139837	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.663175 x 10^-1	167	90	104	172	64.98%	62.32%	257	276	RefGen V2	χ2 p-value for B73 x Mo17: '.5663175' χ2 p-value for Mo17 x B73: '.1254576' Biased in favor of strain: ''
GRMZM2G139828	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.353542 x 10^-1	32	12	25	51	72.73%	67.11%	44	76	RefGen V2	χ2 p-value for B73 x Mo17: '.3937845' χ2 p-value for Mo17 x B73: '.9353542' Biased in favor of strain: ''
GRMZM2G139828	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.05007 x 10^-1	236	156	219	241	60.20%	52.39%	392	460	RefGen V2	χ2 p-value for B73 x Mo17: '.0000533' χ2 p-value for Mo17 x B73: '.305007' Biased in favor of strain: ''
GRMZM2G139811	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.261 x 10^-3	194	253	192	362	43.40%	65.34%	447	554	RefGen V2	χ2 p-value for B73 x Mo17: '.005261' χ2 p-value for Mo17 x B73: '5.10e-13' Biased in favor of strain: 'Mo17'
GRMZM2G139811	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.88791 x 10^-2	26	21	25	76	55.32%	75.25%	47	101	RefGen V2	χ2 p-value for B73 x Mo17: '.0988791' χ2 p-value for Mo17 x B73: '.0673467' Biased in favor of strain: ''
GRMZM2G139805	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0548 x 10^-3	19	0	15	0	100.00%	0.00%	19	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0020548' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: 'B73'
GRMZM2G139805	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	22	0	100.00%	0.00%	9	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: ''
GRMZM2G139797	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	30036	2257	39306	2740	93.01%	6.52%	32293	42046	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G139797	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.62 x 10^-9	591	181	158	156	76.55%	49.68%	772	314	RefGen V2	χ2 p-value for B73 x Mo17: '5.62e-09' χ2 p-value for Mo17 x B73: '1.72e-10' Biased in favor of strain: 'B73'
GRMZM2G139786	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.205993 x 10^-1	62	21	6	40	74.70%	86.96%	83	46	RefGen V2	χ2 p-value for B73 x Mo17: '.1205993' χ2 p-value for Mo17 x B73: '.0035093' Biased in favor of strain: ''
GRMZM2G139786	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1119	252	1024	232	81.62%	18.47%	1371	1256	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G139765	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.86 x 10^-6	62	4	33	4	93.94%	10.81%	66	37	RefGen V2	χ2 p-value for B73 x Mo17: '9.38e-13' χ2 p-value for Mo17 x B73: '1.86e-06' Biased in favor of strain: 'B73'
GRMZM2G139765	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.115 x 10^-4	26	0	12	0	100.00%	0.00%	26	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0003115' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: 'B73'
GRMZM2G139714	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.35 x 10^-9	13	55	21	152	19.12%	87.86%	68	173	RefGen V2	χ2 p-value for B73 x Mo17: '8.97e-17' χ2 p-value for Mo17 x B73: '3.35e-09' Biased in favor of strain: 'Mo17'
GRMZM2G139714	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.75 x 10^-9	81	174	77	184	31.76%	70.50%	255	261	RefGen V2	χ2 p-value for B73 x Mo17: '5.75e-09' χ2 p-value for Mo17 x B73: '3.52e-11' Biased in favor of strain: 'Mo17'
GRMZM2G139712	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.0546 x 10^-2	13	24	7	23	35.14%	76.67%	37	30	RefGen V2	χ2 p-value for B73 x Mo17: '.070546' χ2 p-value for Mo17 x B73: '.003487' Biased in favor of strain: ''
GRMZM2G139712	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.596982 x 10^-1	11	5	23	18	68.75%	43.90%	16	41	RefGen V2	χ2 p-value for B73 x Mo17: '.8596982' χ2 p-value for Mo17 x B73: '.0019876' Biased in favor of strain: ''
GRMZM2G139710	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43015 x 10^-2	355	139	183	279	71.86%	60.39%	494	462	RefGen V2	χ2 p-value for B73 x Mo17: '.0143015' χ2 p-value for Mo17 x B73: '.0042086' Biased in favor of strain: ''
GRMZM2G139710	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.08 x 10^-10	507	289	426	265	63.69%	38.35%	796	691	RefGen V2	χ2 p-value for B73 x Mo17: '1.10e-14' χ2 p-value for Mo17 x B73: '9.08e-10' Biased in favor of strain: 'B73'
GRMZM2G139700	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547208 x 10^-1	9	11	8	11	45.00%	57.89%	20	19	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: ''
GRMZM2G139700	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	4	0	5	33.33%	100.00%	6	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0832614' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G139691	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.796397 x 10^-1	67	41	41	91	62.04%	68.94%	108	132	RefGen V2	χ2 p-value for B73 x Mo17: '.3074092' χ2 p-value for Mo17 x B73: '.5796397' Biased in favor of strain: ''
GRMZM2G139691	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.688902 x 10^-1	71	58	65	57	55.04%	46.72%	129	122	RefGen V2	χ2 p-value for B73 x Mo17: '.2523806' χ2 p-value for Mo17 x B73: '.4688902' Biased in favor of strain: ''
GRMZM2G139689	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.4348 x 10^-3	983	556	934	815	63.87%	46.60%	1539	1749	RefGen V2	χ2 p-value for B73 x Mo17: '1.37e-27' χ2 p-value for Mo17 x B73: '.0044348' Biased in favor of strain: 'B73'
GRMZM2G139689	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	6.9478 x 10^-3	215	260	277	451	45.26%	61.95%	475	728	RefGen V2	χ2 p-value for B73 x Mo17: '4.35e-23' χ2 p-value for Mo17 x B73: '.0069478' Biased in favor of strain: ''
GRMZM2G139688	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.255112 x 10^-1	343	173	346	240	66.47%	40.96%	516	586	RefGen V2	χ2 p-value for B73 x Mo17: '.9255112' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G139688	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.61569 x 10^-2	42	21	37	19	66.67%	33.93%	63	56	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0161569' Biased in favor of strain: 'B73'
GRMZM2G139683	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.912971 x 10^-1	8	11	11	7	42.11%	38.89%	19	18	RefGen V2	χ2 p-value for B73 x Mo17: '.4912971' χ2 p-value for Mo17 x B73: '.3457786' Biased in favor of strain: ''
GRMZM2G139683	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	3	11	62.50%	78.57%	8	14	RefGen V2	χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.3447043' Biased in favor of strain: ''
GRMZM2G139680	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4955 x 10^-2	63	18	34	42	77.78%	55.26%	81	76	RefGen V2	χ2 p-value for B73 x Mo17: '.0338978' χ2 p-value for Mo17 x B73: '.034955' Biased in favor of strain: ''
GRMZM2G139680	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	49	49	40	46	50.00%	53.49%	98	86	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5176341' Biased in favor of strain: ''
GRMZM2G139675	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0819 x 10^-2	71	35	71	46	66.98%	39.32%	106	117	RefGen V2	χ2 p-value for B73 x Mo17: '.0004712' χ2 p-value for Mo17 x B73: '.020819' Biased in favor of strain: 'B73'
GRMZM2G139675	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.831266 x 10^-1	74	34	28	50	68.52%	64.10%	108	78	RefGen V2	χ2 p-value for B73 x Mo17: '.6831266' χ2 p-value for Mo17 x B73: '.6309537' Biased in favor of strain: ''
GRMZM2G139650	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G139650	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	1	2	42.86%	66.67%	7	3	RefGen V2	χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G139643	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.56248 x 10^-2	320	202	351	300	61.30%	46.08%	522	651	RefGen V2	χ2 p-value for B73 x Mo17: '2.41e-07' χ2 p-value for Mo17 x B73: '.0456248' Biased in favor of strain: 'B73'
GRMZM2G139643	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.88 x 10^-6	559	189	295	362	74.73%	55.10%	748	657	RefGen V2	χ2 p-value for B73 x Mo17: '2.88e-06' χ2 p-value for Mo17 x B73: '3.18e-10' Biased in favor of strain: 'B73'
GRMZM2G139639	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G139639	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.615133 x 10^-1	16	9	10	1	64.00%	9.09%	25	11	RefGen V2	χ2 p-value for B73 x Mo17: '.1615133' χ2 p-value for Mo17 x B73: '.0066556' Biased in favor of strain: ''
GRMZM2G139617	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.222364 x 10^-1	95	68	69	52	58.28%	42.98%	163	121	RefGen V2	χ2 p-value for B73 x Mo17: '.0344467' χ2 p-value for Mo17 x B73: '.1222364' Biased in favor of strain: ''
GRMZM2G139617	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.419578 x 10^-1	26	11	17	20	70.27%	54.05%	37	37	RefGen V2	χ2 p-value for B73 x Mo17: '.6419578' χ2 p-value for Mo17 x B73: '.1036379' Biased in favor of strain: ''
GRMZM2G139614	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.9847 x 10^-3	601	244	321	494	71.12%	60.61%	845	815	RefGen V2	χ2 p-value for B73 x Mo17: '.0059847' χ2 p-value for Mo17 x B73: '.0002466' Biased in favor of strain: 'B73'
GRMZM2G139614	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.22367 x 10^-2	267	175	164	134	60.41%	44.97%	442	298	RefGen V2	χ2 p-value for B73 x Mo17: '.0000121' χ2 p-value for Mo17 x B73: '.0822367' Biased in favor of strain: ''
GRMZM2G139583	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0908 x 10^-3	58	7	39	15	89.23%	27.78%	65	54	RefGen V2	χ2 p-value for B73 x Mo17: '2.52e-10' χ2 p-value for Mo17 x B73: '.0010908' Biased in favor of strain: 'B73'
GRMZM2G139583	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.327761 x 10^-1	10	3	13	5	76.92%	27.78%	13	18	RefGen V2	χ2 p-value for B73 x Mo17: '.4327761' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: ''
GRMZM2G139574	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.92 x 10^-11	155	162	49	415	48.90%	89.44%	317	464	RefGen V2	χ2 p-value for B73 x Mo17: '1.92e-11' χ2 p-value for Mo17 x B73: '2.33e-25' Biased in favor of strain: 'Mo17'
GRMZM2G139574	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.359084 x 10^-1	165	139	211	165	54.28%	43.88%	304	376	RefGen V2	χ2 p-value for B73 x Mo17: '.1359084' χ2 p-value for Mo17 x B73: '.0176792' Biased in favor of strain: ''
GRMZM2G139550	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2333	618	2022	435	79.06%	17.70%	2951	2457	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G139550	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43 x 10^-28	451	50	197	71	90.02%	26.49%	501	268	RefGen V2	χ2 p-value for B73 x Mo17: '1.43e-28' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G139535	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.033029 x 10^-1	712	327	392	622	68.53%	61.34%	1039	1014	RefGen V2	χ2 p-value for B73 x Mo17: '.2033029' χ2 p-value for Mo17 x B73: '.0003215' Biased in favor of strain: ''
GRMZM2G139535	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.236577 x 10^-1	118	41	62	46	74.21%	42.59%	159	108	RefGen V2	χ2 p-value for B73 x Mo17: '1.02e-09' χ2 p-value for Mo17 x B73: '.1236577' Biased in favor of strain: ''
GRMZM2G139533	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.53 x 10^-18	969	461	1083	713	67.76%	39.70%	1430	1796	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.53e-18' Biased in favor of strain: 'B73'
GRMZM2G139533	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.54 x 10^-10	251	50	182	161	83.39%	46.94%	301	343	RefGen V2	χ2 p-value for B73 x Mo17: '7.54e-10' χ2 p-value for Mo17 x B73: '9.15e-15' Biased in favor of strain: 'B73'
GRMZM2G139522	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G139522	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	0	3	50.00%	100.00%	4	3	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G139512	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.971465 x 10^-1	12	25	9	14	32.43%	60.87%	37	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0325828' χ2 p-value for Mo17 x B73: '.2971465' Biased in favor of strain: ''
GRMZM2G139512	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	4	1		20.00%	0	5	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G139467	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G139467	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	2	100.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G139463	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.39 x 10^-10	424	246	391	234	63.28%	37.44%	670	625	RefGen V2	χ2 p-value for B73 x Mo17: '6.12e-12' χ2 p-value for Mo17 x B73: '3.39e-10' Biased in favor of strain: 'B73'
GRMZM2G139463	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.16 x 10^-5	574	207	457	416	73.50%	47.65%	781	873	RefGen V2	χ2 p-value for B73 x Mo17: '.0000516' χ2 p-value for Mo17 x B73: '9.52e-33' Biased in favor of strain: 'B73'
GRMZM2G139441	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	1	50.00%	50.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G139441	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	2	100.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G139434	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	6	0.00%	100.00%	1	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G139434	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	4	0	5	33.33%	100.00%	6	5	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G139419	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.410723 x 10^-1	146	112	91	92	56.59%	50.27%	258	183	RefGen V2	χ2 p-value for B73 x Mo17: '.0342813' χ2 p-value for Mo17 x B73: '.9410723' Biased in favor of strain: ''
GRMZM2G139419	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.396673 x 10^-1	122	48	46	100	71.76%	68.49%	170	146	RefGen V2	χ2 p-value for B73 x Mo17: '.1585424' χ2 p-value for Mo17 x B73: '.6396673' Biased in favor of strain: ''
GRMZM2G139374	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.83 x 10^-9	455	127	307	346	78.18%	52.99%	582	653	RefGen V2	χ2 p-value for B73 x Mo17: '3.83e-09' χ2 p-value for Mo17 x B73: '1.21e-13' Biased in favor of strain: 'B73'
GRMZM2G139374	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.499596 x 10^-1	433	337	355	325	56.23%	47.79%	770	680	RefGen V2	χ2 p-value for B73 x Mo17: '.000541' χ2 p-value for Mo17 x B73: '.2499596' Biased in favor of strain: ''
GRMZM2G139372	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	3	2	50.00%	40.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G139372	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G139369	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.27004 x 10^-1	194	105	143	272	64.88%	65.54%	299	415	RefGen V2	χ2 p-value for B73 x Mo17: '.5128717' χ2 p-value for Mo17 x B73: '.627004' Biased in favor of strain: ''
GRMZM2G139369	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.709608 x 10^-1	217	194	235	216	52.80%	47.89%	411	451	RefGen V2	χ2 p-value for B73 x Mo17: '.2565822' χ2 p-value for Mo17 x B73: '.3709608' Biased in favor of strain: ''
GRMZM2G139349	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.456547 x 10^-1	821	811	472	478	50.31%	50.32%	1632	950	RefGen V2	χ2 p-value for B73 x Mo17: '.8044928' χ2 p-value for Mo17 x B73: '.8456547' Biased in favor of strain: ''
GRMZM2G139349	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.400285 x 10^-1	535	335	264	531	61.49%	66.79%	870	795	RefGen V2	χ2 p-value for B73 x Mo17: '.0012099' χ2 p-value for Mo17 x B73: '.9400285' Biased in favor of strain: ''
GRMZM2G139341	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.943586 x 10^-1	694	356	384	668	66.10%	63.50%	1050	1052	RefGen V2	χ2 p-value for B73 x Mo17: '.6943586' χ2 p-value for Mo17 x B73: '.0292497' Biased in favor of strain: ''
GRMZM2G139341	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.16359 x 10^-1	411	327	351	319	55.69%	47.61%	738	670	RefGen V2	χ2 p-value for B73 x Mo17: '.0019876' χ2 p-value for Mo17 x B73: '.216359' Biased in favor of strain: ''
GRMZM2G139329	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.94 x 10^-4	35	12	38	10	74.47%	20.83%	47	48	RefGen V2	χ2 p-value for B73 x Mo17: '.000794' χ2 p-value for Mo17 x B73: '.0000531' Biased in favor of strain: 'B73'
GRMZM2G139329	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G139328	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.247343 x 10^-1	168	98	62	229	63.16%	78.69%	266	291	RefGen V2	χ2 p-value for B73 x Mo17: '.2247343' χ2 p-value for Mo17 x B73: '.0000135' Biased in favor of strain: ''
GRMZM2G139328	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.964512 x 10^-1	50	61	31	75	45.05%	70.75%	111	106	RefGen V2	χ2 p-value for B73 x Mo17: '.2964512' χ2 p-value for Mo17 x B73: '.0000192' Biased in favor of strain: ''
GRMZM2G139324	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.78 x 10^-5	173	101	209	130	63.14%	38.35%	274	339	RefGen V2	χ2 p-value for B73 x Mo17: '.0000136' χ2 p-value for Mo17 x B73: '.0000178' Biased in favor of strain: 'B73'
GRMZM2G139324	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	4	0	80.00%	0.00%	5	4	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G139300	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.67169 x 10^-2	83	14	97	153	85.57%	61.20%	97	250	RefGen V2	χ2 p-value for B73 x Mo17: '.0000786' χ2 p-value for Mo17 x B73: '.0667169' Biased in favor of strain: ''
GRMZM2G139300	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547208 x 10^-1	35	10	21	24	77.78%	53.33%	45	45	RefGen V2	χ2 p-value for B73 x Mo17: '.0001939' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G139296	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.733217 x 10^-1	18	12	22	13	60.00%	37.14%	30	35	RefGen V2	χ2 p-value for B73 x Mo17: '.2733217' χ2 p-value for Mo17 x B73: '.1281902' Biased in favor of strain: ''
GRMZM2G139296	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	3	3	100.00%	50.00%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: ''
GRMZM2G139293	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.29 x 10^-20	398	61	246	187	86.71%	43.19%	459	433	RefGen V2	χ2 p-value for B73 x Mo17: '8.29e-20' χ2 p-value for Mo17 x B73: '3.60e-25' Biased in favor of strain: 'B73'
GRMZM2G139293	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.691714 x 10^-1	22	6	18	13	78.57%	41.94%	28	31	RefGen V2	χ2 p-value for B73 x Mo17: '.0024969' χ2 p-value for Mo17 x B73: '.3691714' Biased in favor of strain: ''
GRMZM2G139284	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	4	0	2	55.56%	100.00%	9	2	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G139284	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.30044 x 10^-2	4	7	3	25	36.36%	89.29%	11	28	RefGen V2	χ2 p-value for B73 x Mo17: '.0330044' χ2 p-value for Mo17 x B73: '.0111176' Biased in favor of strain: ''
GRMZM2G139250	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G139250	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	6	8	6	7	42.86%	53.85%	14	13	RefGen V2	χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: ''
GRMZM2G139223	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.07 x 10^-4	26	6	26	6	81.25%	18.75%	32	32	RefGen V2	χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: 'B73'
GRMZM2G139223	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.56918 x 10^-2	14	23	44	58	37.84%	56.86%	37	102	RefGen V2	χ2 p-value for B73 x Mo17: '.0001993' χ2 p-value for Mo17 x B73: '.0356918' Biased in favor of strain: ''
GRMZM2G139211	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	0	0.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G139211	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.21 x 10^-5	0	18	0	19	0.00%	100.00%	18	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0000131' Biased in favor of strain: 'Mo17'
GRMZM2G139210	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.482456 x 10^-1	371	303	244	277	55.04%	53.17%	674	521	RefGen V2	χ2 p-value for B73 x Mo17: '.008812' χ2 p-value for Mo17 x B73: '.1482456' Biased in favor of strain: ''
GRMZM2G139210	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.633827 x 10^-1	164	74	120	202	68.91%	62.73%	238	322	RefGen V2	χ2 p-value for B73 x Mo17: '.4633827' χ2 p-value for Mo17 x B73: '.1342864' Biased in favor of strain: ''

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