Displaying data sets 155401 - 155500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G22360 UGT85A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.46635'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'full endosperm'
AT1G22360 UGT85A2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22360 UGT85A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.151632'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'pure endosperm, no chalazal'
AT1G22360 UGT85A2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22360 UGT85A2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.85714 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22360 UGT85A2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.337976'
Avg. embryo expression (LCM): '0'
AT1G22340 UGT85A7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G22340 UGT85A7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22340 UGT85A7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.65011 x 10-1 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22340 UGT85A7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.09017 x 10-1 3 8 6 40 27.27% 86.96% 11 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409017'
Avg. expression score for this sample: '37.5289'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G22340 UGT85A7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.58621 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22340 UGT85A7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409017'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G22330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '37.7938'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G22330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '161.564'
Avg. embryo expression (LCM): '3.81781'
AT1G22330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '30.3846'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G22330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G22320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G22320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G22320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22310 MBD8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.802 x 10-3 27 1 96.43% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22310 MBD8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77713 x 10-1 3 3 6 2 50.00% 25.00% 6 8 TAIR8 Avg. embryo expression (dissected): '142.434'
Avg. embryo expression (LCM): '81.2163'
AT1G22310 MBD8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.49132 x 10-1 5 4 13 19 55.56% 59.38% 9 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '148.386'
Avg. expression score in LCM sample: '24.6043'
Tissue used: 'full endosperm'
AT1G22310 MBD8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.37881 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22310 MBD8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02941 x 10-1 6 0 0 3 100.00% 100.00% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '96.8442'
Avg. expression score in LCM sample: '24.6043'
Tissue used: 'pure endosperm, no chalazal'
AT1G22310 MBD8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 21 11 65.62% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22300 GRF10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.25558 x 10-1 366 143 71.91% 509 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22300 GRF10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.47868 x 10-1 72 39 51 82 64.86% 61.65% 111 133 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177683'
Avg. expression score for this sample: '707.427'
Avg. expression score in LCM sample: '438.233'
Tissue used: 'pure endosperm, no chalazal'
AT1G22300 GRF10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.11874 x 10-1 61 55 7 9 52.59% 56.25% 116 16 TAIR8 Avg. embryo expression (dissected): '548.463'
Avg. embryo expression (LCM): '585.267'
AT1G22300 GRF10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.6 x 10-15 421 57 88.08% 478 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22300 GRF10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.9447 x 10-1 52 21 71.23% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22300 GRF10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9978 x 10-2 158 50 119 288 75.96% 70.76% 208 407 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177683'
Avg. expression score for this sample: '830.485'
Avg. expression score in LCM sample: '438.233'
Tissue used: 'full endosperm'
AT1G22290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G22290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G22290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G22280 PAPP2C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '77.9656'
Avg. embryo expression (LCM): '45.2611'
AT1G22280 PAPP2C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22280 PAPP2C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22280 PAPP2C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '184.644'
Avg. expression score in LCM sample: '12.2287'
Tissue used: 'full endosperm'
AT1G22280 PAPP2C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22280 PAPP2C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '59.6913'
Avg. expression score in LCM sample: '12.2287'
Tissue used: 'pure endosperm, no chalazal'
AT1G22275 ZYP1b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 0 0 0 5 100.00% 0 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.60585'
Avg. expression score in LCM sample: '6.17312'
Tissue used: 'pure endosperm, no chalazal'
AT1G22275 ZYP1b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 28 15 65.12% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22275 ZYP1b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0073 x 10-1 13 5 72.22% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22275 ZYP1b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 3 1 50.00% 25.00% 2 4 TAIR8 Avg. embryo expression (dissected): '19.0422'
Avg. embryo expression (LCM): '12.7595'
AT1G22275 ZYP1b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1927 x 10-1 3 2 3 0 60.00% 0.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.3597'
Avg. expression score in LCM sample: '6.17312'
Tissue used: 'full endosperm'
AT1G22275 ZYP1b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 30 11 23 41 73.17% 64.06% 41 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.702202'
Avg. expression score for this sample: '64.1139'
Avg. expression score in LCM sample: '31.2772'
Tissue used: 'full endosperm'
AT1G22270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.27564 x 10-1 34 18 65.38% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.90605 x 10-1 15 5 4 10 75.00% 71.43% 20 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.702202'
Avg. expression score for this sample: '36.5083'
Avg. expression score in LCM sample: '31.2772'
Tissue used: 'pure endosperm, no chalazal'
AT1G22270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.41197 x 10-1 23 9 4 0 71.88% 0.00% 32 4 TAIR8 Avg. embryo expression (dissected): '82.8818'
Avg. embryo expression (LCM): '129.78'
AT1G22270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.261 x 10-3 62 10 86.11% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22260 ZYP1a endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.593 x 10-2 3 7 30.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22260 ZYP1a embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '12.8739'
Avg. embryo expression (LCM): '13.7014'
AT1G22260 ZYP1a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.11194 x 10-1 3 2 2 11 60.00% 84.62% 5 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.749447'
Avg. expression score for this sample: '20.0775'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'full endosperm'
AT1G22260 ZYP1a endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22260 ZYP1a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 1 2 50.00% 66.67% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.749447'
Avg. expression score for this sample: '9.07688'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'pure endosperm, no chalazal'
AT1G22260 ZYP1a endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3521 x 10-1 34 20 62.96% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.90784 x 10-1 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 6 7 6 77.78% 46.15% 27 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.858804'
Avg. expression score for this sample: '26.8552'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G22250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.45257 x 10-1 115 72 29 4 61.50% 12.12% 187 33 TAIR8 Avg. embryo expression (dissected): '182.556'
Avg. embryo expression (LCM): '87.7217'
AT1G22250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-6 50 1 98.04% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.159 x 10-3 5 16 23.81% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.8917 x 10-1 8 4 8 10 66.67% 55.56% 12 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.858804'
Avg. expression score for this sample: '10.8345'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G22240 PUM8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.5 x 10-7 16 0 0 42 100.00% 100.00% 16 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-07'
Avg. expression score for this sample: '18.1739'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G22240 PUM8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22240 PUM8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-07'
Avg. expression score for this sample: '3.35009'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G22240 PUM8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.12688 x 10-1 55 3 94.83% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22240 PUM8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 197 1 99.49% 198 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22240 PUM8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.670614'
Avg. embryo expression (LCM): '0'
AT1G22230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 4 0 1 0 100.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '1.97174'
Avg. embryo expression (LCM): '0'
AT1G22230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 91 2 97.85% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 4 0 0 3 100.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '1.51262'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G22230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '.203342'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G22220 AUF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.52023 x 10-1 7 5 0 15 58.33% 100.00% 12 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.629513'
Avg. expression score for this sample: '30.3537'
Avg. expression score in LCM sample: '12.2434'
Tissue used: 'pure endosperm, no chalazal'
AT1G22220 AUF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22220 AUF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.23 x 10-3 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22220 AUF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 8 1 1 50.00% 50.00% 16 2 TAIR8 Avg. embryo expression (dissected): '20.2979'
Avg. embryo expression (LCM): '13.6009'
AT1G22220 AUF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.53041 x 10-1 41 26 23 32 61.19% 58.18% 67 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.629513'
Avg. expression score for this sample: '45.9642'
Avg. expression score in LCM sample: '12.2434'
Tissue used: 'full endosperm'
AT1G22220 AUF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.7417 x 10-2 6 10 37.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22210 TPPC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22210 TPPC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G22210 TPPC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 67 9 88.16% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22210 TPPC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G22210 TPPC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G22210 TPPC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 54 49 52.43% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-7 188 17 91.71% 205 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G22200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 13 17 3 6 43.33% 66.67% 30 9 TAIR8 Avg. embryo expression (dissected): '38.2634'
Avg. embryo expression (LCM): '66.7237'
AT1G22200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.2934 x 10-2 74 28 36 114 72.55% 76.00% 102 150 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.081926'
Avg. expression score for this sample: '76.3674'
Avg. expression score in LCM sample: '19.2984'
Tissue used: 'full endosperm'
AT1G22200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.61397 x 10-1 31 8 79.49% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'