Displaying data sets 154001 - 154100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G24610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '216.433'
Avg. embryo expression (LCM): '143.356'
AT1G24610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '102.595'
Avg. expression score in LCM sample: '59.9234'
Tissue used: 'full endosperm'
AT1G24600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.7989'
Avg. expression score in LCM sample: '14.2717'
Tissue used: 'full endosperm'
AT1G24600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.7857'
Avg. embryo expression (LCM): '21.337'
AT1G24600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '34.5478'
Avg. expression score in LCM sample: '14.2717'
Tissue used: 'pure endosperm, no chalazal'
AT1G24600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24590 DRNL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24590 DRNL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G24590 DRNL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '4.77401'
Avg. embryo expression (LCM): '5.46298'
AT1G24590 DRNL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24590 DRNL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24590 DRNL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.589983'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G24580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.65696'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G24580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.60677'
Avg. embryo expression (LCM): '3.90572'
AT1G24580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.9908'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G24580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24577 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24577 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24577 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24577 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G24577 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G24577 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G24575 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.679384'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G24575 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G24575 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24575 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24575 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24575 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G24570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '4.26992'
AT1G24570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 57 34 62.64% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.878368'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G24570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 58 27 68.24% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.89887'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G24560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1 x 10-6 94 50 44 281 65.28% 86.46% 144 325 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000012'
Avg. expression score for this sample: '736.597'
Avg. expression score in LCM sample: '131.164'
Tissue used: 'full endosperm'
AT1G24560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.0 x 10-5 313 42 88.17% 355 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.94054 x 10-1 31 35 13 91 46.97% 87.50% 66 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000012'
Avg. expression score for this sample: '351.43'
Avg. expression score in LCM sample: '131.164'
Tissue used: 'pure endosperm, no chalazal'
AT1G24560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4848 x 10-2 15 43 2 7 25.86% 77.78% 58 9 TAIR8 Avg. embryo expression (dissected): '258.973'
Avg. embryo expression (LCM): '197.999'
AT1G24560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4656 x 10-2 192 36 84.21% 228 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6799 x 10-2 51 5 91.07% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24540 CYP86C1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 390 0 100.00% 390 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24540 CYP86C1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.9412 x 10-2 8 0 0 1 100.00% 100.00% 8 1 TAIR8 Avg. embryo expression (dissected): '22.618'
Avg. embryo expression (LCM): '0'
AT1G24540 CYP86C1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 188 0 100.00% 188 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24540 CYP86C1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.8 x 10-16 51 0 0 84 100.00% 100.00% 51 84 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '411.132'
Avg. expression score in LCM sample: '34.3196'
Tissue used: 'pure endosperm, no chalazal'
AT1G24540 CYP86C1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.13761 x 10-1 297 1 99.66% 298 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24540 CYP86C1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 203 1 0 348 99.51% 100.00% 204 348 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1946.59'
Avg. expression score in LCM sample: '34.3196'
Tissue used: 'full endosperm'
AT1G24530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.30291 x 10-1 395 165 106 206 70.54% 66.03% 560 312 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.331081'
Avg. expression score for this sample: '208.653'
Avg. expression score in LCM sample: '9.95049'
Tissue used: 'full endosperm'
AT1G24530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.11 x 10-4 42 44 48.84% 86 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.78904 x 10-1 20 5 80.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.91215 x 10-1 70 39 64.22% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6 x 10-5 402 221 55 37 64.53% 40.22% 623 92 TAIR8 Avg. embryo expression (dissected): '253.279'
Avg. embryo expression (LCM): '172.492'
AT1G24530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.65261 x 10-1 224 92 39 52 70.89% 57.14% 316 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.331081'
Avg. expression score for this sample: '105.725'
Avg. expression score in LCM sample: '9.95049'
Tissue used: 'pure endosperm, no chalazal'
AT1G24520 BCP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.52381'
Avg. expression score for this sample: '7.34966'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G24520 BCP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24520 BCP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.54545 x 10-1 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24520 BCP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54545 x 10-1 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24520 BCP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G24520 BCP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.42857 x 10-1 0 3 1 0 0.00% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.52381'
Avg. expression score for this sample: '1.3963'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G24510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.0 x 10-19 1021 641 803 3152 61.43% 79.70% 1662 3955 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-07'
Avg. expression score for this sample: '420.668'
Avg. expression score in LCM sample: '320.532'
Tissue used: 'full endosperm'
AT1G24510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.9 x 10-4 1789 2353 317 531 43.19% 62.62% 4142 848 TAIR8 Avg. embryo expression (dissected): '966.041'
Avg. embryo expression (LCM): '1040.35'
AT1G24510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3334 x 10-2 2966 1156 71.96% 4122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0951 x 10-2 954 831 453 1305 53.45% 74.23% 1785 1758 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-07'
Avg. expression score for this sample: '441.352'
Avg. expression score in LCM sample: '320.532'
Tissue used: 'pure endosperm, no chalazal'
AT1G24510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8 x 10-12 569 122 82.34% 691 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 4540 1159 79.66% 5699 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24490 ALB4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.62 x 10-4 158 23 87.29% 181 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24490 ALB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.04541 x 10-1 42 26 15 52 61.76% 77.61% 68 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005717'
Avg. expression score for this sample: '18.6866'
Avg. expression score in LCM sample: '7.64292'
Tissue used: 'pure endosperm, no chalazal'
AT1G24490 ALB4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.5907 x 10-1 61 83 23 26 42.36% 53.06% 144 49 TAIR8 Avg. embryo expression (dissected): '42.4694'
Avg. embryo expression (LCM): '64.0362'
AT1G24490 ALB4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7 x 10-13 371 32 92.06% 403 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24490 ALB4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.47053 x 10-1 49 13 79.03% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24490 ALB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.963 x 10-3 146 46 63 193 76.04% 75.39% 192 256 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005717'
Avg. expression score for this sample: '40.7087'
Avg. expression score in LCM sample: '7.64292'
Tissue used: 'full endosperm'
AT1G24485 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G24485 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24485 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G24485 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24485 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G24485 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0836 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.815 x 10-3 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.282 x 10-3 0 37 0 7 0.00% 100.00% 37 7 TAIR8 Avg. embryo expression (dissected): '21.0562'
Avg. embryo expression (LCM): '7.86167'
AT1G24480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 3 0 3 0.00% 100.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36985'
Avg. expression score for this sample: '2.26691'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G24480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.85714 x 10-1 0 3 0 1 0.00% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36985'
Avg. expression score for this sample: '1.09767'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G24470 KCR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 13 1 4 1 92.86% 20.00% 14 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.69774'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G24470 KCR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.85714 x 10-1 1 1 2 0 50.00% 0.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.0705'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G24470 KCR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24470 KCR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8485 x 10-2 22 3 88.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24470 KCR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.3517 x 10-2 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24470 KCR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 20 15 13 8 57.14% 38.10% 35 21 TAIR8 Avg. embryo expression (dissected): '96.8245'
Avg. embryo expression (LCM): '37.7008'
AT1G24460 TNO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.98612 x 10-1 162 111 67 53 59.34% 44.17% 273 120 TAIR8 Avg. embryo expression (dissected): '362.634'
Avg. embryo expression (LCM): '179.964'
AT1G24460 TNO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7 x 10-19 923 163 84.99% 1086 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24460 TNO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.79001 x 10-1 300 112 149 302 72.82% 66.96% 412 451 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.5e-06'
Avg. expression score for this sample: '440.364'
Avg. expression score in LCM sample: '152.785'
Tissue used: 'pure endosperm, no chalazal'
AT1G24460 TNO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.48757 x 10-1 140 42 76.92% 182 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24460 TNO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0 x 10-10 575 115 83.33% 690 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G24460 TNO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.8 x 10-6 748 283 330 888 72.55% 72.91% 1031 1218 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.5e-06'
Avg. expression score for this sample: '673.192'
Avg. expression score in LCM sample: '152.785'
Tissue used: 'full endosperm'
AT1G24450 NFD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.8307 x 10-2 159 54 89 214 74.65% 70.63% 213 303 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110025'
Avg. expression score for this sample: '314.223'
Avg. expression score in LCM sample: '149.978'
Tissue used: 'full endosperm'
AT1G24450 NFD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.05 x 10-4 63 6 91.30% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'