Displaying data sets 15301 - 15400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G44830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.182386'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 6 40.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 41 14 74.55% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.423826'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.4518'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44800 CHR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '300.223'
Avg. expression score in LCM sample: '140.747'
Tissue used: 'pure endosperm, no chalazal'
AT5G44800 CHR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '446.724'
Avg. expression score in LCM sample: '140.747'
Tissue used: 'full endosperm'
AT5G44800 CHR4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '365.717'
Avg. embryo expression (LCM): '252.503'
AT5G44800 CHR4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44800 CHR4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44800 CHR4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44790 RAN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.8938 x 10-2 24 16 10 66 60.00% 86.84% 40 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-15'
Avg. expression score for this sample: '180.861'
Avg. expression score in LCM sample: '146.803'
Tissue used: 'pure endosperm, no chalazal'
AT5G44790 RAN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.2 x 10-15 161 49 41 374 76.67% 90.12% 210 415 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-15'
Avg. expression score for this sample: '386.085'
Avg. expression score in LCM sample: '146.803'
Tissue used: 'full endosperm'
AT5G44790 RAN1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 11 5 3 57.69% 37.50% 26 8 TAIR8 Avg. embryo expression (dissected): '122.449'
Avg. embryo expression (LCM): '68.6201'
AT5G44790 RAN1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.35847 x 10-1 73 7 91.25% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44790 RAN1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5 x 10-7 385 24 94.13% 409 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44790 RAN1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-6 422 31 93.16% 453 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44785 OSB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 31 9 16 17 77.50% 51.52% 40 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.920711'
Avg. expression score for this sample: '25.2059'
Avg. expression score in LCM sample: '6.3201'
Tissue used: 'pure endosperm, no chalazal'
AT5G44785 OSB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.0886 x 10-1 59 16 33 48 78.67% 59.26% 75 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.920711'
Avg. expression score for this sample: '37.6479'
Avg. expression score in LCM sample: '6.3201'
Tissue used: 'full endosperm'
AT5G44785 OSB3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.63294 x 10-1 41 33 10 11 55.41% 52.38% 74 21 TAIR8 Avg. embryo expression (dissected): '52.3564'
Avg. embryo expression (LCM): '57.8197'
AT5G44785 OSB3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.32186 x 10-1 6 4 60.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44785 OSB3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.74614 x 10-1 45 27 62.50% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44785 OSB3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-6 130 16 89.04% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44780 MORF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 6 3 7 57.14% 70.00% 14 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.693959'
Avg. expression score for this sample: '33.0185'
Avg. expression score in LCM sample: '8.87754'
Tissue used: 'pure endosperm, no chalazal'
AT5G44780 MORF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.32822 x 10-1 6 6 2 23 50.00% 92.00% 12 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.693959'
Avg. expression score for this sample: '30.4244'
Avg. expression score in LCM sample: '8.87754'
Tissue used: 'full endosperm'
AT5G44780 MORF4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.7047 x 10-2 5 18 4 2 21.74% 33.33% 23 6 TAIR8 Avg. embryo expression (dissected): '59.2136'
Avg. embryo expression (LCM): '49.845'
AT5G44780 MORF4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44780 MORF4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.60267 x 10-1 33 8 80.49% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44780 MORF4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.76626 x 10-1 13 6 68.42% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.815434'
Avg. embryo expression (LCM): '0'
AT5G44770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 5 37.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 3 0 0 2 100.00% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '.855515'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44750 REV1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35353 x 10-1 23 3 8 9 88.46% 52.94% 26 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208099'
Avg. expression score for this sample: '16.4264'
Avg. expression score in LCM sample: '9.65653'
Tissue used: 'pure endosperm, no chalazal'
AT5G44750 REV1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.96831 x 10-1 29 7 6 13 80.56% 68.42% 36 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208099'
Avg. expression score for this sample: '25.8564'
Avg. expression score in LCM sample: '9.65653'
Tissue used: 'full endosperm'
AT5G44750 REV1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 10 5 5 3 66.67% 37.50% 15 8 TAIR8 Avg. embryo expression (dissected): '25.7507'
Avg. embryo expression (LCM): '15.8364'
AT5G44750 REV1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.79142 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44750 REV1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.52579 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44750 REV1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.022 x 10-3 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44740 POLH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 3 2 5 50.00% 71.43% 6 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.26715'
Avg. expression score for this sample: '6.98821'
Avg. expression score in LCM sample: '.676104'
Tissue used: 'pure endosperm, no chalazal'
AT5G44740 POLH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.10619 x 10-1 16 0 6 16 100.00% 72.73% 16 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.26715'
Avg. expression score for this sample: '9.9246'
Avg. expression score in LCM sample: '.676104'
Tissue used: 'full endosperm'
AT5G44740 POLH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31857 x 10-1 9 5 2 1 64.29% 33.33% 14 3 TAIR8 Avg. embryo expression (dissected): '22.4999'
Avg. embryo expression (LCM): '16.6778'
AT5G44740 POLH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44740 POLH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.84389 x 10-1 30 6 83.33% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44740 POLH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6 x 10-5 89 1 98.89% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.5427 x 10-2 108 56 37 171 65.85% 82.21% 164 208 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000564'
Avg. expression score for this sample: '420.865'
Avg. expression score in LCM sample: '223.555'
Tissue used: 'pure endosperm, no chalazal'
AT5G44730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3286 x 10-2 303 129 96 287 70.14% 74.93% 432 383 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000564'
Avg. expression score for this sample: '669.436'
Avg. expression score in LCM sample: '223.555'
Tissue used: 'full endosperm'
AT5G44730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.53372 x 10-1 88 109 20 30 44.67% 60.00% 197 50 TAIR8 Avg. embryo expression (dissected): '444.05'
Avg. embryo expression (LCM): '644.393'
AT5G44730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.348 x 10-3 46 36 56.10% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7889 x 10-2 62 10 86.11% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.7 x 10-4 113 18 86.26% 131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '56.6427'
Avg. expression score in LCM sample: '44.5053'
Tissue used: 'pure endosperm, no chalazal'
AT5G44720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 4 1 6 60.00% 85.71% 10 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '278.181'
Avg. expression score in LCM sample: '44.5053'
Tissue used: 'full endosperm'
AT5G44720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '65.509'
Avg. embryo expression (LCM): '62.0394'
AT5G44720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.3 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.39243 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.70651 x 10-1 63 29 38 43 68.48% 53.09% 92 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.422769'
Avg. expression score for this sample: '154.438'
Avg. expression score in LCM sample: '59.1444'
Tissue used: 'pure endosperm, no chalazal'
AT5G44710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.959 x 10-3 58 11 9 41 84.06% 82.00% 69 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.422769'
Avg. expression score for this sample: '102.58'
Avg. expression score in LCM sample: '59.1444'
Tissue used: 'full endosperm'
AT5G44710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 37 30 15 10 55.22% 40.00% 67 25 TAIR8 Avg. embryo expression (dissected): '142.949'
Avg. embryo expression (LCM): '211.499'
AT5G44710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.42639 x 10-1 26 5 83.87% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.1366 x 10-2 40 8 83.33% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44705 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44705 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44705 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44705 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44705 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44705 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44700 GSO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.1406 x 10-2 303 184 45 267 62.22% 85.58% 487 312 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '48.1297'
Avg. expression score in LCM sample: '5.21776'
Tissue used: 'pure endosperm, no chalazal'
AT5G44700 GSO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1149 625 279 2488 64.77% 89.92% 1774 2767 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '188.797'
Avg. expression score in LCM sample: '5.21776'
Tissue used: 'full endosperm'
AT5G44700 GSO2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.2 x 10-8 639 1105 223 315 36.64% 58.55% 1744 538 TAIR8 Avg. embryo expression (dissected): '208.486'
Avg. embryo expression (LCM): '113.417'
AT5G44700 GSO2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 781 13 98.36% 794 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44700 GSO2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 3613 81 97.81% 3694 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44700 GSO2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4688 230 95.32% 4918 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36985'
Avg. expression score for this sample: '.327059'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6985 x 10-1 3 5 1 1 37.50% 50.00% 8 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36985'
Avg. expression score for this sample: '6.08947'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 2 0 0 66.67% 6 0 TAIR8 Avg. embryo expression (dissected): '10.1851'
Avg. embryo expression (LCM): '0'
AT5G44690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.549067'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.477169'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.9458'
Avg. embryo expression (LCM): '5.37507'
AT5G44680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'