GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G142013	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.004324 x 10^-1	88	34	32	91	72.13%	73.98%	122	123	RefGen V2	χ2 p-value for B73 x Mo17: '.2004324' χ2 p-value for Mo17 x B73: '.085168' Biased in favor of strain: ''
GRMZM2G142013	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	66	66	41	55	50.00%	57.29%	132	96	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1530419' Biased in favor of strain: ''
GRMZM2G141992	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	1	2	100.00%	66.67%	5	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G141992	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	7		87.50%	0	8	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	371	111	374	87	76.97%	18.87%	482	461	RefGen V2	χ2 p-value for B73 x Mo17: '2.35e-32' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G141948	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7 x 10^-5	273	153	213	133	64.08%	38.44%	426	346	RefGen V2	χ2 p-value for B73 x Mo17: '6.10e-09' χ2 p-value for Mo17 x B73: '.000017' Biased in favor of strain: 'B73'
GRMZM2G141948	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.97902 x 10^-2	101	36	90	101	73.72%	52.88%	137	191	RefGen V2	χ2 p-value for B73 x Mo17: '.0797902' χ2 p-value for Mo17 x B73: '.000053' Biased in favor of strain: ''
GRMZM2G141941	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.93 x 10^-6	129	23	78	69	84.87%	46.94%	152	147	RefGen V2	χ2 p-value for B73 x Mo17: '1.93e-06' χ2 p-value for Mo17 x B73: '3.90e-07' Biased in favor of strain: 'B73'
GRMZM2G141941	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1412 x 10^-2	178	76	96	64	70.08%	40.00%	254	160	RefGen V2	χ2 p-value for B73 x Mo17: '1.55e-10' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: 'B73'
GRMZM2G141922	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74 x 10^-9	738	437	707	498	62.81%	41.33%	1175	1205	RefGen V2	χ2 p-value for B73 x Mo17: '1.62e-18' χ2 p-value for Mo17 x B73: '1.74e-09' Biased in favor of strain: 'B73'
GRMZM2G141922	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.34825 x 10^-2	697	301	280	340	69.84%	54.84%	998	620	RefGen V2	χ2 p-value for B73 x Mo17: '.0334825' χ2 p-value for Mo17 x B73: '4.17e-10' Biased in favor of strain: ''
GRMZM2G141911	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.213403 x 10^-1	24	6	19	20	80.00%	51.28%	30	39	RefGen V2	χ2 p-value for B73 x Mo17: '.1213403' χ2 p-value for Mo17 x B73: '.04154' Biased in favor of strain: ''
GRMZM2G141911	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.02 x 10^-12	118	31	163	53	79.19%	24.54%	149	216	RefGen V2	χ2 p-value for B73 x Mo17: '1.02e-12' χ2 p-value for Mo17 x B73: '7.18e-14' Biased in favor of strain: 'B73'
GRMZM2G141873	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.31 x 10^-18	362	108	257	94	77.02%	26.78%	470	351	RefGen V2	χ2 p-value for B73 x Mo17: '1.05e-31' χ2 p-value for Mo17 x B73: '3.31e-18' Biased in favor of strain: 'B73'
GRMZM2G141873	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.14 x 10^-19	353	48	195	140	88.03%	41.79%	401	335	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-19' χ2 p-value for Mo17 x B73: '4.53e-22' Biased in favor of strain: 'B73'
GRMZM2G141859	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	4	15	100.00%	78.95%	4	19	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.256145' Biased in favor of strain: ''
GRMZM2G141859	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.680826 x 10^-1	22	24	28	20	47.83%	41.67%	46	48	RefGen V2	χ2 p-value for B73 x Mo17: '.7680826' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: ''
GRMZM2G141848	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.47 x 10^-7	178	87	175	93	67.17%	34.70%	265	268	RefGen V2	χ2 p-value for B73 x Mo17: '2.27e-08' χ2 p-value for Mo17 x B73: '5.47e-07' Biased in favor of strain: 'B73'
GRMZM2G141848	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.683434 x 10^-1	204	116	234	215	63.75%	47.88%	320	449	RefGen V2	χ2 p-value for B73 x Mo17: '.2683434' χ2 p-value for Mo17 x B73: '3.10e-17' Biased in favor of strain: ''
GRMZM2G141818	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.80814 x 10^-2	97	26	41	58	78.86%	58.59%	123	99	RefGen V2	χ2 p-value for B73 x Mo17: '.004117' χ2 p-value for Mo17 x B73: '.0880814' Biased in favor of strain: ''
GRMZM2G141818	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8259 x 10^-3	519	335	387	305	60.77%	44.08%	854	692	RefGen V2	χ2 p-value for B73 x Mo17: '3.05e-10' χ2 p-value for Mo17 x B73: '.0018259' Biased in favor of strain: 'B73'
GRMZM2G141810	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4055	1719	1079	2244	70.23%	67.53%	5774	3323	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G141810	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.75 x 10^-19	21600	11955	6188	17706	64.37%	74.10%	33555	23894	RefGen V2	χ2 p-value for B73 x Mo17: '4.75e-19' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G141799	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.8144 x 10^-3	115	89	150	157	56.37%	51.14%	204	307	RefGen V2	χ2 p-value for B73 x Mo17: '.0018144' χ2 p-value for Mo17 x B73: '7.88e-09' Biased in favor of strain: ''
GRMZM2G141799	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.562984 x 10^-1	214	202	305	257	51.44%	45.73%	416	562	RefGen V2	χ2 p-value for B73 x Mo17: '.5562984' χ2 p-value for Mo17 x B73: '.0428922' Biased in favor of strain: ''
GRMZM2G141784	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.922505 x 10^-1	113	88	110	108	56.22%	49.54%	201	218	RefGen V2	χ2 p-value for B73 x Mo17: '.0778391' χ2 p-value for Mo17 x B73: '.8922505' Biased in favor of strain: ''
GRMZM2G141784	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.808397 x 10^-1	196	87	128	241	69.26%	65.31%	283	369	RefGen V2	χ2 p-value for B73 x Mo17: '.3551468' χ2 p-value for Mo17 x B73: '.5808397' Biased in favor of strain: ''
GRMZM2G141776	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.25931 x 10^-2	198	131	59	199	60.18%	77.13%	329	258	RefGen V2	χ2 p-value for B73 x Mo17: '.0125931' χ2 p-value for Mo17 x B73: '.0003627' Biased in favor of strain: ''
GRMZM2G141776	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.4274 x 10^-3	137	192	126	226	41.64%	64.20%	329	352	RefGen V2	χ2 p-value for B73 x Mo17: '.0024274' χ2 p-value for Mo17 x B73: '9.82e-08' Biased in favor of strain: 'Mo17'
GRMZM2G141760	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.88419 x 10^-2	406	327	323	266	55.39%	45.16%	733	589	RefGen V2	χ2 p-value for B73 x Mo17: '.0035236' χ2 p-value for Mo17 x B73: '.0188419' Biased in favor of strain: 'B73'
GRMZM2G141760	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.060335 x 10^-1	187	75	109	149	71.37%	57.75%	262	258	RefGen V2	χ2 p-value for B73 x Mo17: '.1060335' χ2 p-value for Mo17 x B73: '.002385' Biased in favor of strain: ''
GRMZM2G141735	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.929962 x 10^-1	20	8	10	9	71.43%	47.37%	28	19	RefGen V2	χ2 p-value for B73 x Mo17: '.5929962' χ2 p-value for Mo17 x B73: '.0743529' Biased in favor of strain: ''
GRMZM2G141735	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.688114 x 10^-1	64	41	36	41	60.95%	53.25%	105	77	RefGen V2	χ2 p-value for B73 x Mo17: '.0247957' χ2 p-value for Mo17 x B73: '.5688114' Biased in favor of strain: ''
GRMZM2G141723	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.68 x 10^-13	2	68	4	63	2.86%	94.03%	70	67	RefGen V2	χ2 p-value for B73 x Mo17: '3.06e-15' χ2 p-value for Mo17 x B73: '5.68e-13' Biased in favor of strain: 'Mo17'
GRMZM2G141723	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.11 x 10^-14	0	53	1	117	0.00%	99.15%	53	118	RefGen V2	χ2 p-value for B73 x Mo17: '7.37e-25' χ2 p-value for Mo17 x B73: '7.11e-14' Biased in favor of strain: 'Mo17'
GRMZM2G141704	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.003509 x 10^-1	13	2	16	5	86.67%	23.81%	15	21	RefGen V2	χ2 p-value for B73 x Mo17: '.1003509' χ2 p-value for Mo17 x B73: '.000031' Biased in favor of strain: ''
GRMZM2G141704	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.814974 x 10^-1	32	28	22	23	53.33%	51.11%	60	45	RefGen V2	χ2 p-value for B73 x Mo17: '.6055766' χ2 p-value for Mo17 x B73: '.8814974' Biased in favor of strain: ''
GRMZM2G141679	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141679	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	2		66.67%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141665	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.8362 x 10^-3	151	48	134	112	75.88%	45.53%	199	246	RefGen V2	χ2 p-value for B73 x Mo17: '.0058362' χ2 p-value for Mo17 x B73: '2.02e-12' Biased in favor of strain: 'B73'
GRMZM2G141665	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.608669 x 10^-1	455	285	577	592	61.49%	50.64%	740	1169	RefGen V2	χ2 p-value for B73 x Mo17: '4.12e-10' χ2 p-value for Mo17 x B73: '.6608669' Biased in favor of strain: ''
GRMZM2G141642	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.658029 x 10^-1	21	26	26	48	44.68%	64.86%	47	74	RefGen V2	χ2 p-value for B73 x Mo17: '.4658029' χ2 p-value for Mo17 x B73: '.0105443' Biased in favor of strain: ''
GRMZM2G141642	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.078896 x 10^-1	46	27	23	87	63.01%	79.09%	73	110	RefGen V2	χ2 p-value for B73 x Mo17: '.5078896' χ2 p-value for Mo17 x B73: '.0057059' Biased in favor of strain: ''
GRMZM2G141638	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141638	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.739433 x 10^-1	267	293	317	303	47.68%	48.87%	560	620	RefGen V2	χ2 p-value for B73 x Mo17: '.2718987' χ2 p-value for Mo17 x B73: '.5739433' Biased in favor of strain: ''
GRMZM2G141636	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.41326 x 10^-1	272	205	223	193	57.02%	46.39%	477	416	RefGen V2	χ2 p-value for B73 x Mo17: '.002157' χ2 p-value for Mo17 x B73: '.141326' Biased in favor of strain: ''
GRMZM2G141636	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.0 x 10^-5	249	47	125	157	84.12%	55.67%	296	282	RefGen V2	χ2 p-value for B73 x Mo17: '1.89e-10' χ2 p-value for Mo17 x B73: '.00009' Biased in favor of strain: 'B73'
GRMZM2G141634	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.299492 x 10^-1	19	40	18	50	32.20%	73.53%	59	68	RefGen V2	χ2 p-value for B73 x Mo17: '1.96e-08' χ2 p-value for Mo17 x B73: '.2299492' Biased in favor of strain: ''
GRMZM2G141634	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.900896 x 10^-1	69	82	67	87	45.70%	56.49%	151	154	RefGen V2	χ2 p-value for B73 x Mo17: '.2900896' χ2 p-value for Mo17 x B73: '.107039' Biased in favor of strain: ''
GRMZM2G141624	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	2	1	66.67%	33.33%	6	3	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G141624	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141607	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	5	4	3	68.75%	42.86%	16	7	RefGen V2	χ2 p-value for B73 x Mo17: '.8596982' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: ''
GRMZM2G141607	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.56 x 10^-18	2843	2218	3371	2678	56.17%	44.27%	5061	6049	RefGen V2	χ2 p-value for B73 x Mo17: '1.56e-18' χ2 p-value for Mo17 x B73: '5.09e-19' Biased in favor of strain: 'B73'
GRMZM2G141600	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.226781 x 10^-1	369	262	243	261	58.48%	51.79%	631	504	RefGen V2	χ2 p-value for B73 x Mo17: '.0000205' χ2 p-value for Mo17 x B73: '.4226781' Biased in favor of strain: ''
GRMZM2G141600	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.843644 x 10^-1	645	338	312	570	65.62%	64.63%	983	882	RefGen V2	χ2 p-value for B73 x Mo17: '.4843644' χ2 p-value for Mo17 x B73: '.1985423' Biased in favor of strain: ''
GRMZM2G141596	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.305597 x 10^-1	32	24	31	32	57.14%	50.79%	56	63	RefGen V2	χ2 p-value for B73 x Mo17: '.1305597' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: ''
GRMZM2G141596	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6463 x 10^-3	75	34	64	33	68.81%	34.02%	109	97	RefGen V2	χ2 p-value for B73 x Mo17: '.000086' χ2 p-value for Mo17 x B73: '.0016463' Biased in favor of strain: 'B73'
GRMZM2G141587	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.33647 x 10^-2	232	195	112	142	54.33%	55.91%	427	254	RefGen V2	χ2 p-value for B73 x Mo17: '.0733647' χ2 p-value for Mo17 x B73: '.0597861' Biased in favor of strain: ''
GRMZM2G141587	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.187 x 10^-4	468	128	196	274	78.52%	58.30%	596	470	RefGen V2	χ2 p-value for B73 x Mo17: '8.24e-10' χ2 p-value for Mo17 x B73: '.0001187' Biased in favor of strain: 'B73'
GRMZM2G141551	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	2	0.00%	100.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G141551	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	10	0	5	0.00%	100.00%	10	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G141535	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.30954 x 10^-1	92	66	81	75	58.23%	48.08%	158	156	RefGen V2	χ2 p-value for B73 x Mo17: '.0385978' χ2 p-value for Mo17 x B73: '.630954' Biased in favor of strain: ''
GRMZM2G141535	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.082989 x 10^-1	30	8	40	13	78.95%	24.53%	38	53	RefGen V2	χ2 p-value for B73 x Mo17: '.1082989' χ2 p-value for Mo17 x B73: '7.64e-11' Biased in favor of strain: ''
GRMZM2G141517	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.38 x 10^-24	3012	1045	1594	2155	74.24%	57.48%	4057	3749	RefGen V2	χ2 p-value for B73 x Mo17: '1.38e-24' χ2 p-value for Mo17 x B73: '8.29e-33' Biased in favor of strain: 'B73'
GRMZM2G141517	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3819	1745	3414	1814	68.64%	34.70%	5564	5228	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G141510	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	0	0.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141510	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	0	0.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141503	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.385779 x 10^-1	30	9	12	18	76.92%	60.00%	39	30	RefGen V2	χ2 p-value for B73 x Mo17: '.1742393' χ2 p-value for Mo17 x B73: '.4385779' Biased in favor of strain: ''
GRMZM2G141503	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.32645 x 10^-2	28	15	18	9	65.12%	33.33%	43	27	RefGen V2	χ2 p-value for B73 x Mo17: '.0474254' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G141499	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G141499	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	2	3	71.43%	60.00%	7	5	RefGen V2	χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: ''
GRMZM2G141473	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.61925 x 10^-2	14	1	7	5	93.33%	41.67%	15	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0284605' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: ''
GRMZM2G141473	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	172	9	188	13	95.03%	6.47%	181	201	RefGen V2	χ2 p-value for B73 x Mo17: '8.72e-34' χ2 p-value for Mo17 x B73: '5.28e-35' Biased in favor of strain: 'B73'
GRMZM2G141472	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.9572 x 10^-1	173	183	184	189	48.60%	50.67%	356	373	RefGen V2	χ2 p-value for B73 x Mo17: '.5961127' χ2 p-value for Mo17 x B73: '.79572' Biased in favor of strain: ''
GRMZM2G141472	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.220005 x 10^-1	17	13	15	23	56.67%	60.53%	30	38	RefGen V2	χ2 p-value for B73 x Mo17: '.245266' χ2 p-value for Mo17 x B73: '.4220005' Biased in favor of strain: ''
GRMZM2G141399	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.580681 x 10^-1	1158	601	566	994	65.83%	63.72%	1759	1560	RefGen V2	χ2 p-value for B73 x Mo17: '.4580681' χ2 p-value for Mo17 x B73: '.0134887' Biased in favor of strain: ''
GRMZM2G141399	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.967056 x 10^-1	117	71	60	75	62.23%	55.56%	188	135	RefGen V2	χ2 p-value for B73 x Mo17: '.000794' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: ''
GRMZM2G141392	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.206714 x 10^-1	20	11	15	9	64.52%	37.50%	31	24	RefGen V2	χ2 p-value for B73 x Mo17: '.1059975' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G141392	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	7	12	62.50%	63.16%	8	19	RefGen V2	χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.7456026' Biased in favor of strain: ''
GRMZM2G141386	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.19 x 10^-15	4625	1870	2620	3955	71.21%	60.15%	6495	6575	RefGen V2	χ2 p-value for B73 x Mo17: '8.19e-15' χ2 p-value for Mo17 x B73: '3.82e-29' Biased in favor of strain: 'B73'
GRMZM2G141386	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.04693 x 10^-2	425	372	331	469	53.32%	58.62%	797	800	RefGen V2	χ2 p-value for B73 x Mo17: '.0604693' χ2 p-value for Mo17 x B73: '1.07e-06' Biased in favor of strain: ''
GRMZM2G141383	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.4367	44	37	69	32	54.32%	31.68%	81	101	RefGen V2	χ2 p-value for B73 x Mo17: '.4367' χ2 p-value for Mo17 x B73: '.0002317' Biased in favor of strain: ''
GRMZM2G141383	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141382	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	9.247 x 10^-4	166	25	25	103	86.91%	80.47%	191	128	RefGen V2	χ2 p-value for B73 x Mo17: '2.94e-09' χ2 p-value for Mo17 x B73: '.0009247' Biased in favor of strain: ''
GRMZM2G141382	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	1.1412 x 10^-2	20	2	1	9	90.91%	90.00%	22	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0001242' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: ''
GRMZM2G141376	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	10023	6309	10284	6495	61.37%	38.71%	16332	16779	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G141376	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.84 x 10^-5	170	41	63	40	80.57%	38.83%	211	103	RefGen V2	χ2 p-value for B73 x Mo17: '.0000184' χ2 p-value for Mo17 x B73: '2.07e-09' Biased in favor of strain: 'B73'
GRMZM2G141355	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.56558 x 10^-2	234	74	88	126	75.97%	58.88%	308	214	RefGen V2	χ2 p-value for B73 x Mo17: '.0005303' χ2 p-value for Mo17 x B73: '.0156558' Biased in favor of strain: ''
GRMZM2G141355	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.76 x 10^-10	408	238	418	257	63.16%	38.07%	646	675	RefGen V2	χ2 p-value for B73 x Mo17: '2.25e-11' χ2 p-value for Mo17 x B73: '5.76e-10' Biased in favor of strain: 'B73'
GRMZM2G141353	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141353	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	4	0	100.00%	0.00%	5	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G141350	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141350	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.270892 x 10^-1	4	6	1	14	40.00%	93.33%	10	15	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.0007891' Biased in favor of strain: ''
GRMZM2G141325	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.77796 x 10^-2	12	3	8	2	80.00%	20.00%	15	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0201368' χ2 p-value for Mo17 x B73: '.0577796' Biased in favor of strain: ''
GRMZM2G141325	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		32	7	8	0	82.05%	0.00%	39	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0415423' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: ''
GRMZM2G141322	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G141322	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.05689 x 10^-2	16	7	13	0	69.57%	0.00%	23	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: ''
GRMZM2G141320	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.58613 x 10^-2	30	14	8	24	68.18%	75.00%	44	32	RefGen V2	χ2 p-value for B73 x Mo17: '.0158613' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G141320	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.59 x 10^-5	306	81	53	49	79.07%	48.04%	387	102	RefGen V2	χ2 p-value for B73 x Mo17: '2.27e-07' χ2 p-value for Mo17 x B73: '.0000659' Biased in favor of strain: 'B73'

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