| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G27200 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '105.105' Avg. expression score in LCM sample: '78.7955' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27200 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '84.3288' Avg. expression score in LCM sample: '78.7955' Tissue used: 'full endosperm' |
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| AT1G27190 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2 x 10-5 | 711 | 194 | 328 | 711 | 78.56% | 68.43% | 905 | 1039 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00219' Avg. expression score for this sample: '429.244' Avg. expression score in LCM sample: '248.806' Tissue used: 'full endosperm' |
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| AT1G27190 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.634 x 10-3 | 480 | 341 | 118 | 119 | 58.47% | 50.21% | 821 | 237 | TAIR8 |
Avg. embryo expression (dissected): '605.545' Avg. embryo expression (LCM): '372.475' |
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| AT1G27190 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.18439 x 10-1 | 377 | 116 | 248 | 305 | 76.47% | 55.15% | 493 | 553 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00219' Avg. expression score for this sample: '361.171' Avg. expression score in LCM sample: '248.806' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27190 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 961 | 70 | 93.21% | 1031 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27190 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.595 x 10-3 | 137 | 31 | 81.55% | 168 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27190 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-12 | 278 | 38 | 87.97% | 316 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.56168 x 10-1 | 7 | 5 | 58.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27180 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.90909 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 0 | 1 | 100.00% | 100.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.97924' Avg. expression score in LCM sample: '6.81983' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '8.21871' Avg. expression score in LCM sample: '6.81983' Tissue used: 'full endosperm' |
|||||
| AT1G27180 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.2669' Avg. embryo expression (LCM): '7.35933' |
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| AT1G27170 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '12.472' Avg. embryo expression (LCM): '6.40487' |
||||||
| AT1G27170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27170 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 13 | 1 | 92.86% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.1591 x 10-2 | 10 | 10 | 50.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.321739' Avg. expression score for this sample: '11.3482' Avg. expression score in LCM sample: '6.52587' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.10526 x 10-1 | 7 | 0 | 0 | 3 | 100.00% | 100.00% | 7 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.321739' Avg. expression score for this sample: '13.9598' Avg. expression score in LCM sample: '6.52587' Tissue used: 'full endosperm' |
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| AT1G27160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.60479' Avg. expression score in LCM sample: '1.91073' Tissue used: 'full endosperm' |
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| AT1G27160 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.12819' Avg. embryo expression (LCM): '0' |
|||||
| AT1G27160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.337442' Avg. expression score in LCM sample: '1.91073' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G27160 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.60663 x 10-1 | 41 | 10 | 80.39% | 51 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27150 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.12248 x 10-1 | 30 | 6 | 83.33% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.17082 x 10-1 | 4 | 4 | 1 | 15 | 50.00% | 93.75% | 8 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.290687' Avg. expression score for this sample: '10.7653' Avg. expression score in LCM sample: '8.49539' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.22968 x 10-1 | 15 | 7 | 68.18% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.49876 x 10-1 | 17 | 25 | 17 | 89 | 40.48% | 83.96% | 42 | 106 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.290687' Avg. expression score for this sample: '26.7913' Avg. expression score in LCM sample: '8.49539' Tissue used: 'full endosperm' |
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| AT1G27150 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.7337 x 10-1 | 2 | 7 | 4 | 2 | 22.22% | 33.33% | 9 | 6 | TAIR8 |
Avg. embryo expression (dissected): '12.9639' Avg. embryo expression (LCM): '11.6167' |
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| AT1G27140 | GSTU14 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT1G27140 | GSTU14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27140 | GSTU14 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27140 | GSTU14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27140 | GSTU14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27140 | GSTU14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.953581' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G27135 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G27135 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G27135 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27135 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27135 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27135 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27130 | GSTU13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.38564 x 10-1 | 51 | 11 | 82.26% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27130 | GSTU13 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.9 x 10-6 | 289 | 9 | 96.98% | 298 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27130 | GSTU13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.8379 x 10-1 | 28 | 5 | 6 | 5 | 84.85% | 45.45% | 33 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.003466' Avg. expression score for this sample: '9.65592' Avg. expression score in LCM sample: '9.40667' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27130 | GSTU13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.264 x 10-2 | 6 | 6 | 50.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27130 | GSTU13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.47 x 10-3 | 35 | 6 | 4 | 38 | 85.37% | 90.48% | 41 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.003466' Avg. expression score for this sample: '14.2022' Avg. expression score in LCM sample: '9.40667' Tissue used: 'full endosperm' |
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| AT1G27130 | GSTU13 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 20 | 21 | 1 | 3 | 48.78% | 75.00% | 41 | 4 | TAIR8 |
Avg. embryo expression (dissected): '10.6589' Avg. embryo expression (LCM): '14.9321' |
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| AT1G27120 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.6875 x 10-2 | 673 | 435 | 264 | 150 | 60.74% | 36.23% | 1108 | 414 | TAIR8 |
Avg. embryo expression (dissected): '479.727' Avg. embryo expression (LCM): '256.861' |
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| AT1G27120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.3081 x 10-1 | 73 | 44 | 62.39% | 117 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27120 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.6 x 10-24 | 903 | 211 | 81.06% | 1114 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0707 x 10-2 | 392 | 253 | 60.78% | 645 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.63774 x 10-1 | 1261 | 379 | 577 | 552 | 76.89% | 48.89% | 1640 | 1129 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.471422' Avg. expression score for this sample: '521.759' Avg. expression score in LCM sample: '242.707' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.74612 x 10-1 | 879 | 203 | 539 | 599 | 81.24% | 52.64% | 1082 | 1138 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.471422' Avg. expression score for this sample: '306.829' Avg. expression score in LCM sample: '242.707' Tissue used: 'full endosperm' |
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| AT1G27110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.72604' Avg. expression score in LCM sample: '.837781' Tissue used: 'full endosperm' |
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| AT1G27110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '10.4824' Avg. embryo expression (LCM): '10.7878' |
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| AT1G27110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.10099' Avg. expression score in LCM sample: '.837781' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.8042 x 10-1 | 5 | 1 | 83.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 2 | 75.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.85 x 10-4 | 239 | 7 | 97.15% | 246 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.4 x 10-8 | 397 | 7 | 98.27% | 404 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.4889 x 10-2 | 51 | 17 | 13 | 52 | 75.00% | 80.00% | 68 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '923.009' Avg. expression score in LCM sample: '83.102' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G27100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.356 x 10-3 | 139 | 3 | 97.89% | 142 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 374 | 40 | 36 | 541 | 90.34% | 93.76% | 414 | 577 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1849.05' Avg. expression score in LCM sample: '83.102' Tissue used: 'full endosperm' |
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| AT1G27100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.72548 x 10-1 | 8 | 4 | 1 | 2 | 66.67% | 66.67% | 12 | 3 | TAIR8 |
Avg. embryo expression (dissected): '266.066' Avg. embryo expression (LCM): '45.7383' |
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| AT1G27090 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.1394 x 10-1 | 51 | 49 | 14 | 20 | 51.00% | 58.82% | 100 | 34 | TAIR8 |
Avg. embryo expression (dissected): '1221.59' Avg. embryo expression (LCM): '773.018' |
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| AT1G27090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 46 | 13 | 77.97% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27090 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.1 x 10-5 | 145 | 12 | 92.36% | 157 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.9751 x 10-2 | 169 | 31 | 84.50% | 200 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.33317 x 10-1 | 60 | 16 | 28 | 42 | 78.95% | 60.00% | 76 | 70 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001413' Avg. expression score for this sample: '820.827' Avg. expression score in LCM sample: '216.985' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.14 x 10-4 | 76 | 25 | 10 | 98 | 75.25% | 90.74% | 101 | 108 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001413' Avg. expression score for this sample: '418.079' Avg. expression score in LCM sample: '216.985' Tissue used: 'full endosperm' |
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| AT1G27080 | NRT1.6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 709 | 13 | 96 | 269 | 98.20% | 73.70% | 722 | 365 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '4.3e-32' Avg. expression score for this sample: '195.526' Avg. expression score in LCM sample: '222.982' Tissue used: 'full endosperm' |
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| AT1G27080 | NRT1.6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.78 x 10-4 | 54 | 9 | 10 | 8 | 85.71% | 44.44% | 63 | 18 | TAIR8 |
Avg. embryo expression (dissected): '33.9582' Avg. embryo expression (LCM): '3.64199' |
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| AT1G27080 | NRT1.6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.61 x 10-4 | 449 | 43 | 195 | 238 | 91.26% | 54.97% | 492 | 433 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '4.3e-32' Avg. expression score for this sample: '211.998' Avg. expression score in LCM sample: '222.982' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27080 | NRT1.6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2318 | 6 | 99.74% | 2324 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27080 | NRT1.6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.38356 x 10-1 | 106 | 18 | 85.48% | 124 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27080 | NRT1.6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1005 | 8 | 99.21% | 1013 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.18 x 10-4 | 206 | 40 | 83.74% | 246 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3 x 10-7 | 171 | 20 | 89.53% | 191 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.96541 x 10-1 | 76 | 40 | 37 | 109 | 65.52% | 74.66% | 116 | 146 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005633' Avg. expression score for this sample: '62.4701' Avg. expression score in LCM sample: '20.9445' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 55 | 21 | 72.37% | 76 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.718 x 10-3 | 169 | 102 | 97 | 372 | 62.36% | 79.32% | 271 | 469 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005633' Avg. expression score for this sample: '90.4888' Avg. expression score in LCM sample: '20.9445' Tissue used: 'full endosperm' |
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| AT1G27070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.19098 x 10-1 | 124 | 146 | 38 | 33 | 45.93% | 46.48% | 270 | 71 | TAIR8 |
Avg. embryo expression (dissected): '115.474' Avg. embryo expression (LCM): '84.0797' |
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| AT1G27060 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '11.8114' Avg. embryo expression (LCM): '16.3262' |
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| AT1G27060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27060 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10.0626' Avg. expression score in LCM sample: '3.82146' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '6.177' Avg. expression score in LCM sample: '3.82146' Tissue used: 'full endosperm' |
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| AT1G27050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.83012 x 10-1 | 17 | 11 | 4 | 38 | 60.71% | 90.48% | 28 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.238775' Avg. expression score for this sample: '41.2674' Avg. expression score in LCM sample: '14.9772' Tissue used: 'full endosperm' |
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| AT1G27050 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 34 | 35 | 12 | 15 | 49.28% | 55.56% | 69 | 27 | TAIR8 |
Avg. embryo expression (dissected): '91.2445' Avg. embryo expression (LCM): '109.862' |
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| AT1G27050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 17 | 8 | 5 | 12 | 68.00% | 70.59% | 25 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.238775' Avg. expression score for this sample: '24.1433' Avg. expression score in LCM sample: '14.9772' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27050 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.6 x 10-7 | 85 | 1 | 98.84% | 86 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.2037 x 10-2 | 4 | 7 | 36.36% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.39647 x 10-1 | 29 | 13 | 69.05% | 42 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27040 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.16788 x 10-1 | 11 | 1 | 91.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27040 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |