Displaying data sets 152501 - 152600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G27660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '23.1163'
Avg. embryo expression (LCM): '25.4814'
AT1G27650 ATU2AF35A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4312 x 10-2 376 518 123 146 42.06% 54.28% 894 269 TAIR8 Avg. embryo expression (dissected): '1165.17'
Avg. embryo expression (LCM): '815.453'
AT1G27650 ATU2AF35A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.959 x 10-3 136 30 81.93% 166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27650 ATU2AF35A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-5 448 115 79.57% 563 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27650 ATU2AF35A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.99 x 10-4 387 168 167 534 69.73% 76.18% 555 701 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001275'
Avg. expression score for this sample: '570.47'
Avg. expression score in LCM sample: '259.8'
Tissue used: 'full endosperm'
AT1G27650 ATU2AF35A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3507 x 10-2 393 130 75.14% 523 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27650 ATU2AF35A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.13893 x 10-1 267 185 102 349 59.07% 77.38% 452 451 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001275'
Avg. expression score for this sample: '745.538'
Avg. expression score in LCM sample: '259.8'
Tissue used: 'pure endosperm, no chalazal'
AT1G27640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '41.502'
Avg. expression score in LCM sample: '23.2227'
Tissue used: 'pure endosperm, no chalazal'
AT1G27640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '67.4857'
Avg. embryo expression (LCM): '19.8426'
AT1G27640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.9115'
Avg. expression score in LCM sample: '23.2227'
Tissue used: 'full endosperm'
AT1G27640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27630 CYCT1;3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27630 CYCT1;3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 2 1 5 33.33% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '98.7682'
Avg. expression score in LCM sample: '33.8052'
Tissue used: 'full endosperm'
AT1G27630 CYCT1;3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27630 CYCT1;3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.03199 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27630 CYCT1;3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '90.7381'
Avg. expression score in LCM sample: '33.8052'
Tissue used: 'pure endosperm, no chalazal'
AT1G27630 CYCT1;3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '75.3667'
Avg. embryo expression (LCM): '51.1636'
AT1G27620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.51095'
Avg. embryo expression (LCM): '.853983'
AT1G27620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.66534'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G27620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G27620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G27610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G27610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G27610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27600 IRX9-L endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5 x 10-6 125 15 89.29% 140 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27600 IRX9-L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3502 x 10-1 85 25 39 91 77.27% 70.00% 110 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272665'
Avg. expression score for this sample: '278.385'
Avg. expression score in LCM sample: '322.208'
Tissue used: 'full endosperm'
AT1G27600 IRX9-L endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.656 x 10-3 33 3 91.67% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27600 IRX9-L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 50 28 19 42 64.10% 68.85% 78 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272665'
Avg. expression score for this sample: '402.383'
Avg. expression score in LCM sample: '322.208'
Tissue used: 'pure endosperm, no chalazal'
AT1G27600 IRX9-L endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.48922 x 10-1 70 19 78.65% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27600 IRX9-L embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.37108 x 10-1 50 79 20 25 38.76% 55.56% 129 45 TAIR8 Avg. embryo expression (dissected): '699.201'
Avg. embryo expression (LCM): '450.891'
AT1G27595 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.16166 x 10-1 61 55 22 10 52.59% 31.25% 116 32 TAIR8 Avg. embryo expression (dissected): '70.1942'
Avg. embryo expression (LCM): '69.6247'
AT1G27595 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.88421 x 10-1 33 10 76.74% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27595 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.8676 x 10-2 100 28 78.12% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27595 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.1243 x 10-2 87 45 24 110 65.91% 82.09% 132 134 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.308636'
Avg. expression score for this sample: '76.9938'
Avg. expression score in LCM sample: '36.3186'
Tissue used: 'full endosperm'
AT1G27595 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3684 x 10-2 112 27 80.58% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27595 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.70316 x 10-1 79 43 39 74 64.75% 65.49% 122 113 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.308636'
Avg. expression score for this sample: '62.2637'
Avg. expression score in LCM sample: '36.3186'
Tissue used: 'pure endosperm, no chalazal'
AT1G27590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 1 2 85.71% 66.67% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19935'
Avg. expression score for this sample: '13.1777'
Avg. expression score in LCM sample: '15.3446'
Tissue used: 'pure endosperm, no chalazal'
AT1G27590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5523 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '22.1956'
Avg. embryo expression (LCM): '16.188'
AT1G27590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.94389 x 10-1 3 0 2 11 100.00% 84.62% 3 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19935'
Avg. expression score for this sample: '18.7524'
Avg. expression score in LCM sample: '15.3446'
Tissue used: 'full endosperm'
AT1G27590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.53831 x 10-1 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.40405 x 10-1 1 2 0 9 33.33% 100.00% 3 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '96.9397'
Avg. expression score in LCM sample: '84.7188'
Tissue used: 'full endosperm'
AT1G27580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.34084 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 1 33.33% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '64.9307'
Avg. expression score in LCM sample: '84.7188'
Tissue used: 'pure endosperm, no chalazal'
AT1G27580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 4 0 2 0.00% 100.00% 4 2 TAIR8 Avg. embryo expression (dissected): '76.1383'
Avg. embryo expression (LCM): '102.264'
AT1G27570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Avg. embryo expression (dissected): '22.9461'
Avg. embryo expression (LCM): '28.4577'
AT1G27570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 4 0.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.94428'
Avg. expression score in LCM sample: '1.51389'
Tissue used: 'full endosperm'
AT1G27570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.3315'
Avg. expression score in LCM sample: '1.51389'
Tissue used: 'pure endosperm, no chalazal'
AT1G27570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54545 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27565 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27565 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.03122'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G27565 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.13186'
Avg. embryo expression (LCM): '7.34677'
AT1G27565 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.0964'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G27565 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27565 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.07382'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G27550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.36391'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G27550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.77213'
Avg. embryo expression (LCM): '0'
AT1G27540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.1 x 10-23 44 592 15 171 6.92% 91.94% 636 186 TAIR8 Avg. embryo expression (dissected): '3042.44'
Avg. embryo expression (LCM): '2238.84'
AT1G27540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.8 x 10-15 259 20 92.83% 279 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 52 169 23.53% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1 x 10-13 82 315 41 1192 20.65% 96.67% 397 1233 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-08'
Avg. expression score for this sample: '2595.11'
Avg. expression score in LCM sample: '1571.57'
Tissue used: 'full endosperm'
AT1G27540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 748 38 95.17% 786 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.91515 x 10-1 71 316 44 660 18.35% 93.75% 387 704 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-08'
Avg. expression score for this sample: '3085.01'
Avg. expression score in LCM sample: '1571.57'
Tissue used: 'pure endosperm, no chalazal'
AT1G27530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.2921 x 10-2 336 195 113 398 63.28% 77.89% 531 511 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.6e-08'
Avg. expression score for this sample: '615.469'
Avg. expression score in LCM sample: '218.176'
Tissue used: 'pure endosperm, no chalazal'
AT1G27530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.8 x 10-18 1536 292 84.03% 1828 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.09504 x 10-1 206 247 54 114 45.47% 67.86% 453 168 TAIR8 Avg. embryo expression (dissected): '564.009'
Avg. embryo expression (LCM): '398.999'
AT1G27530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.7 x 10-8 551 217 212 740 71.74% 77.73% 768 952 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.6e-08'
Avg. expression score for this sample: '733.12'
Avg. expression score in LCM sample: '218.176'
Tissue used: 'full endosperm'
AT1G27530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.14 x 10-4 224 47 82.66% 271 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-30 1775 274 86.63% 2049 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.4 x 10-6 135 14 90.60% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.6295 x 10-2 136 33 50 100 80.47% 66.67% 169 150 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020769'
Avg. expression score for this sample: '51.0889'
Avg. expression score in LCM sample: '25.0012'
Tissue used: 'full endosperm'
AT1G27520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.196 x 10-3 10 12 45.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.09108 x 10-1 94 32 74.60% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.95818 x 10-1 56 11 26 47 83.58% 64.38% 67 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020769'
Avg. expression score for this sample: '36.1167'
Avg. expression score in LCM sample: '25.0012'
Tissue used: 'pure endosperm, no chalazal'
AT1G27520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.97899 x 10-1 55 41 17 9 57.29% 34.62% 96 26 TAIR8 Avg. embryo expression (dissected): '42.5591'
Avg. embryo expression (LCM): '29.0731'
AT1G27510 EX2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '139.397'
Avg. embryo expression (LCM): '103.005'
AT1G27510 EX2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27510 EX2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27510 EX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '163.701'
Avg. expression score in LCM sample: '33.7758'
Tissue used: 'full endosperm'
AT1G27510 EX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '84.5742'
Avg. expression score in LCM sample: '33.7758'
Tissue used: 'pure endosperm, no chalazal'
AT1G27510 EX2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27500 KLCR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G27500 KLCR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '56.2741'
Avg. expression score in LCM sample: '37.7002'
Tissue used: 'pure endosperm, no chalazal'