| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G27850 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 519 | 19 | 96.47% | 538 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27850 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.8229 x 10-2 | 105 | 37 | 42 | 19 | 73.94% | 31.15% | 142 | 61 | TAIR8 |
Avg. embryo expression (dissected): '156.102' Avg. embryo expression (LCM): '111.558' |
||||
| AT1G27850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.5308 x 10-2 | 46 | 31 | 59.74% | 77 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.40535 x 10-1 | 159 | 29 | 84 | 53 | 84.57% | 38.69% | 188 | 137 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.155122' Avg. expression score for this sample: '155.787' Avg. expression score in LCM sample: '72.6518' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G27850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.23 x 10-4 | 45 | 43 | 51.14% | 88 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.7199 x 10-2 | 394 | 72 | 148 | 156 | 84.55% | 51.32% | 466 | 304 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.155122' Avg. expression score for this sample: '219.265' Avg. expression score in LCM sample: '72.6518' Tissue used: 'full endosperm' |
|||||
| AT1G27840 | ATCSA-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.1892 x 10-2 | 31 | 9 | 5 | 30 | 77.50% | 85.71% | 40 | 35 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.132939' Avg. expression score for this sample: '63.9128' Avg. expression score in LCM sample: '62.8924' Tissue used: 'full endosperm' |
||||
| AT1G27840 | ATCSA-1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 1 | 83.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27840 | ATCSA-1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.09734 x 10-1 | 25 | 5 | 83.33% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27840 | ATCSA-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.11 x 10-4 | 36 | 0 | 100.00% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27840 | ATCSA-1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 4 | 0 | 3 | 33.33% | 100.00% | 6 | 3 | TAIR8 |
Avg. embryo expression (dissected): '73.7526' Avg. embryo expression (LCM): '57.1792' |
|||
| AT1G27840 | ATCSA-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 4 | 2 | 6 | 33.33% | 75.00% | 6 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.132939' Avg. expression score for this sample: '64.7176' Avg. expression score in LCM sample: '62.8924' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G27820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.554634' Avg. expression score in LCM sample: '1.57268' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G27820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.732095' Avg. expression score in LCM sample: '1.57268' Tissue used: 'full endosperm' |
|||||||
| AT1G27820 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '5.68703' Avg. embryo expression (LCM): '0' |
||||||
| AT1G27820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27820 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27770 | ACA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27770 | ACA1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '351.743' Avg. embryo expression (LCM): '37.5627' |
|||||
| AT1G27770 | ACA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27770 | ACA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '111.315' Avg. expression score in LCM sample: '7.61352' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G27770 | ACA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '281.878' Avg. expression score in LCM sample: '7.61352' Tissue used: 'full endosperm' |
||||||
| AT1G27770 | ACA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27760 | SAT32 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.12053 x 10-1 | 6 | 2 | 75.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27760 | SAT32 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.95985 x 10-1 | 29 | 14 | 14 | 16 | 67.44% | 53.33% | 43 | 30 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.494497' Avg. expression score for this sample: '114.503' Avg. expression score in LCM sample: '95.5658' Tissue used: 'full endosperm' |
||||
| AT1G27760 | SAT32 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.971 x 10-2 | 71 | 23 | 75.53% | 94 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27760 | SAT32 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.66919 x 10-1 | 24 | 11 | 68.57% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27760 | SAT32 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.1593 x 10-1 | 13 | 8 | 5 | 5 | 61.90% | 50.00% | 21 | 10 | TAIR8 |
Avg. embryo expression (dissected): '71.0346' Avg. embryo expression (LCM): '71.7848' |
|||
| AT1G27760 | SAT32 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.62158 x 10-1 | 28 | 12 | 23 | 33 | 70.00% | 58.93% | 40 | 56 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.494497' Avg. expression score for this sample: '131.222' Avg. expression score in LCM sample: '95.5658' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G27752 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.37949 x 10-1 | 334 | 169 | 232 | 503 | 66.40% | 68.44% | 503 | 735 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001266' Avg. expression score for this sample: '186.406' Avg. expression score in LCM sample: '49.1939' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G27752 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.7 x 10-5 | 534 | 190 | 142 | 415 | 73.76% | 74.51% | 724 | 557 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001266' Avg. expression score for this sample: '165.722' Avg. expression score in LCM sample: '49.1939' Tissue used: 'full endosperm' |
|||||
| AT1G27752 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.08427 x 10-1 | 107 | 40 | 72.79% | 147 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27752 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.5004 x 10-1 | 199 | 180 | 111 | 70 | 52.51% | 38.67% | 379 | 181 | TAIR8 |
Avg. embryo expression (dissected): '162.797' Avg. embryo expression (LCM): '88.7891' |
||||
| AT1G27752 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-12 | 481 | 86 | 84.83% | 567 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27752 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-16 | 521 | 81 | 86.54% | 602 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27750 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.1 x 10-9 | 95 | 8 | 92.23% | 103 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27750 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.77086 x 10-1 | 13 | 5 | 5 | 3 | 72.22% | 37.50% | 18 | 8 | TAIR8 |
Avg. embryo expression (dissected): '171.218' Avg. embryo expression (LCM): '35.1263' |
||||
| AT1G27750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.61597 x 10-1 | 57 | 49 | 53.77% | 106 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.04764 x 10-1 | 19 | 0 | 7 | 6 | 100.00% | 46.15% | 19 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.311386' Avg. expression score for this sample: '106.568' Avg. expression score in LCM sample: '52.9713' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G27750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.185 x 10-3 | 4 | 14 | 22.22% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0823 x 10-1 | 54 | 5 | 55 | 25 | 91.53% | 31.25% | 59 | 80 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.311386' Avg. expression score for this sample: '102.481' Avg. expression score in LCM sample: '52.9713' Tissue used: 'full endosperm' |
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| AT1G27740 | RSL4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G27740 | RSL4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27740 | RSL4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27740 | RSL4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27740 | RSL4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT1G27740 | RSL4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27730 | STZ | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000225' Avg. expression score for this sample: '88.4795' Avg. expression score in LCM sample: '7.87808' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G27730 | STZ | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27730 | STZ | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.29 x 10-4 | 22 | 1 | 4 | 36 | 95.65% | 90.00% | 23 | 40 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000225' Avg. expression score for this sample: '167.278' Avg. expression score in LCM sample: '7.87808' Tissue used: 'full endosperm' |
||||
| AT1G27730 | STZ | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '29.154' Avg. embryo expression (LCM): '0' |
|||||
| AT1G27730 | STZ | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 0 | 100.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27730 | STZ | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.16215 x 10-1 | 26 | 0 | 100.00% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27720 | TAF4B | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.03752 x 10-1 | 97 | 33 | 74.62% | 130 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27720 | TAF4B | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 4 | 0 | 0 | 50.00% | 8 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.04975' Avg. embryo expression (LCM): '4.67179' |
||||
| AT1G27720 | TAF4B | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.6099 x 10-2 | 114 | 19 | 85.71% | 133 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27720 | TAF4B | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.1431 x 10-1 | 17 | 13 | 7 | 33 | 56.67% | 82.50% | 30 | 40 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.025228' Avg. expression score for this sample: '13.8593' Avg. expression score in LCM sample: '5.46762' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27720 | TAF4B | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.3952 x 10-2 | 78 | 36 | 19 | 101 | 68.42% | 84.17% | 114 | 120 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.025228' Avg. expression score for this sample: '24.0586' Avg. expression score in LCM sample: '5.46762' Tissue used: 'full endosperm' |
||||
| AT1G27720 | TAF4B | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.35926 x 10-1 | 13 | 2 | 86.67% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.28244 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 13 | 5 | 25 | 44 | 72.22% | 63.77% | 18 | 69 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.925827' Avg. expression score for this sample: '51.2499' Avg. expression score in LCM sample: '572.513' Tissue used: 'full endosperm' |
|||||
| AT1G27710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 12 | 6 | 66.67% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.42697 x 10-1 | 7 | 1 | 87.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '26.0038' Avg. embryo expression (LCM): '2.86336' |
|||||
| AT1G27710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.1897 x 10-1 | 87 | 37 | 18 | 32 | 70.16% | 64.00% | 124 | 50 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.925827' Avg. expression score for this sample: '501.114' Avg. expression score in LCM sample: '572.513' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G27700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '71.0909' Avg. expression score in LCM sample: '65.5086' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '64.5771' Avg. expression score in LCM sample: '65.5086' Tissue used: 'full endosperm' |
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| AT1G27700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '81.4099' Avg. embryo expression (LCM): '63.0943' |
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| AT1G27700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27695 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-23 | 726 | 83 | 89.74% | 809 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27695 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.46176 x 10-1 | 801 | 788 | 162 | 162 | 50.41% | 50.00% | 1589 | 324 | TAIR8 |
Avg. embryo expression (dissected): '2390.87' Avg. embryo expression (LCM): '1222.36' |
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| AT1G27695 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.6 x 10-18 | 616 | 78 | 88.76% | 694 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27695 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.4857 x 10-2 | 820 | 348 | 363 | 839 | 70.21% | 69.80% | 1168 | 1202 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.9e-18' Avg. expression score for this sample: '2080.48' Avg. expression score in LCM sample: '459.133' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27695 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.6076 x 10-2 | 379 | 98 | 79.45% | 477 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27695 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.9 x 10-24 | 877 | 235 | 269 | 1066 | 78.87% | 79.85% | 1112 | 1335 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.9e-18' Avg. expression score for this sample: '1616.73' Avg. expression score in LCM sample: '459.133' Tissue used: 'full endosperm' |
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| AT1G27690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.0 x 10-6 | 161 | 37 | 44 | 179 | 81.31% | 80.27% | 198 | 223 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000033' Avg. expression score for this sample: '165.172' Avg. expression score in LCM sample: '92.3029' Tissue used: 'full endosperm' |
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| AT1G27690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.74059 x 10-1 | 43 | 20 | 68.25% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.3148 x 10-2 | 116 | 23 | 83.45% | 139 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27690 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-11 | 226 | 14 | 94.17% | 240 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G27690 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.11671 x 10-1 | 97 | 121 | 34 | 65 | 44.50% | 65.66% | 218 | 99 | TAIR8 |
Avg. embryo expression (dissected): '216.589' Avg. embryo expression (LCM): '130.433' |
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| AT1G27690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.2123 x 10-1 | 106 | 63 | 53 | 176 | 62.72% | 76.86% | 169 | 229 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000033' Avg. expression score for this sample: '162.559' Avg. expression score in LCM sample: '92.3029' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27680 | APL2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.02506 x 10-1 | 435 | 228 | 229 | 559 | 65.61% | 70.94% | 663 | 788 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.128635' Avg. expression score for this sample: '254.294' Avg. expression score in LCM sample: '125.55' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27680 | APL2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.255 x 10-3 | 43 | 6 | 87.76% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27680 | APL2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.64216 x 10-1 | 134 | 110 | 115 | 380 | 54.92% | 76.77% | 244 | 495 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.128635' Avg. expression score for this sample: '100.943' Avg. expression score in LCM sample: '125.55' Tissue used: 'full endosperm' |
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| AT1G27680 | APL2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.60236 x 10-1 | 97 | 112 | 20 | 29 | 46.41% | 59.18% | 209 | 49 | TAIR8 |
Avg. embryo expression (dissected): '77.4352' Avg. embryo expression (LCM): '41.9205' |
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| AT1G27680 | APL2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.12021 x 10-1 | 23 | 6 | 79.31% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27680 | APL2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.48 x 10-4 | 72 | 12 | 85.71% | 84 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G27670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G27670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.46221' Avg. expression score in LCM sample: '1.58737' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G27670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.15992' Avg. expression score in LCM sample: '1.58737' Tissue used: 'full endosperm' |
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| AT1G27670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '7.12845' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G27660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G27660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |