| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G28590 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.99494 x 10-1 | 1706 | 9 | 99.48% | 1715 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.08455 x 10-1 | 907 | 2 | 99.78% | 909 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.63 x 10-4 | 76 | 0 | 100.00% | 76 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.9 x 10-5 | 150 | 2 | 98.68% | 152 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.84541 x 10-1 | 9 | 1 | 1 | 3 | 90.00% | 75.00% | 10 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004573' Avg. expression score for this sample: '116.715' Avg. expression score in LCM sample: '17.6669' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.316 x 10-3 | 25 | 6 | 7 | 48 | 80.65% | 87.27% | 31 | 55 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004573' Avg. expression score for this sample: '146.57' Avg. expression score in LCM sample: '17.6669' Tissue used: 'full endosperm' |
|||||
| AT1G28580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.34762 x 10-1 | 18 | 2 | 90.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '26.117' Avg. embryo expression (LCM): '0' |
|||||
| AT1G28570 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G28570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G28570 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G28570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.259024' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G28570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.186474' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28560 | SRD2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.394389' Avg. expression score for this sample: '13.9782' Avg. expression score in LCM sample: '4.2183' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G28560 | SRD2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.21739 x 10-1 | 3 | 1 | 0 | 9 | 75.00% | 100.00% | 4 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.394389' Avg. expression score for this sample: '13.8357' Avg. expression score in LCM sample: '4.2183' Tissue used: 'full endosperm' |
||||
| AT1G28560 | SRD2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28560 | SRD2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '13.9179' Avg. embryo expression (LCM): '18.75' |
||||
| AT1G28560 | SRD2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28560 | SRD2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.01173 x 10-1 | 16 | 1 | 94.12% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28550 | RABA1i | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28550 | RABA1i | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28550 | RABA1i | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '5.48238' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G28550 | RABA1i | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '7.47545' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G28550 | RABA1i | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '11.8881' Avg. embryo expression (LCM): '7.67329' |
|||||
| AT1G28550 | RABA1i | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28540 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.34842 x 10-1 | 7 | 2 | 0 | 0 | 77.78% | 9 | 0 | TAIR8 |
Avg. embryo expression (dissected): '47.9782' Avg. embryo expression (LCM): '77.4487' |
|||||
| AT1G28540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.1009 x 10-1 | 12 | 6 | 66.67% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28540 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.75709 x 10-1 | 7 | 2 | 77.78% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.70917 x 10-1 | 5 | 5 | 9 | 8 | 50.00% | 47.06% | 10 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.225452' Avg. expression score for this sample: '85.7463' Avg. expression score in LCM sample: '19.5923' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.66128 x 10-1 | 10 | 3 | 7 | 4 | 76.92% | 36.36% | 13 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.225452' Avg. expression score for this sample: '73.3219' Avg. expression score in LCM sample: '19.5923' Tissue used: 'full endosperm' |
|||||
| AT1G28530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 2 | 0 | 1 | 60.00% | 100.00% | 5 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '8.12309' Avg. expression score in LCM sample: '5.21776' Tissue used: 'full endosperm' |
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| AT1G28530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.89157' Avg. expression score in LCM sample: '5.21776' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28530 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28571 x 10-1 | 0 | 3 | 1 | 0 | 0.00% | 0.00% | 3 | 1 | TAIR8 |
Avg. embryo expression (dissected): '24.4855' Avg. embryo expression (LCM): '26.7623' |
||||
| AT1G28530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G28530 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.47475 x 10-1 | 2 | 2 | 50.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.27273 x 10-1 | 13 | 1 | 92.86% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28520 | VOZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.8 x 10-7 | 758 | 187 | 80.21% | 945 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28520 | VOZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.9 x 10-20 | 473 | 52 | 90.10% | 525 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28520 | VOZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.96836 x 10-1 | 76 | 47 | 58 | 121 | 61.79% | 67.60% | 123 | 179 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.080881' Avg. expression score for this sample: '189.32' Avg. expression score in LCM sample: '184.767' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28520 | VOZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.859 x 10-2 | 205 | 87 | 100 | 292 | 70.21% | 74.49% | 292 | 392 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.080881' Avg. expression score for this sample: '341.074' Avg. expression score in LCM sample: '184.767' Tissue used: 'full endosperm' |
||||
| AT1G28520 | VOZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.306 x 10-3 | 69 | 13 | 84.15% | 82 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28520 | VOZ1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.87684 x 10-1 | 34 | 36 | 10 | 22 | 48.57% | 68.75% | 70 | 32 | TAIR8 |
Avg. embryo expression (dissected): '115.701' Avg. embryo expression (LCM): '82.1833' |
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| AT1G28510 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 33 | 25 | 19 | 9 | 56.90% | 32.14% | 58 | 28 | TAIR8 |
Avg. embryo expression (dissected): '211.133' Avg. embryo expression (LCM): '202.796' |
||||
| AT1G28510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.0053 x 10-2 | 7 | 9 | 43.75% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28510 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.9 x 10-14 | 385 | 27 | 93.45% | 412 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.4133 x 10-2 | 210 | 112 | 65.22% | 322 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.37781 x 10-1 | 52 | 14 | 41 | 83 | 78.79% | 66.94% | 66 | 124 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.122782' Avg. expression score for this sample: '194.746' Avg. expression score in LCM sample: '32.8792' Tissue used: 'full endosperm' |
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| AT1G28510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.17946 x 10-1 | 50 | 12 | 11 | 25 | 80.65% | 69.44% | 62 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.122782' Avg. expression score for this sample: '156.667' Avg. expression score in LCM sample: '32.8792' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28500 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 0 | 0 | 75.00% | 4 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '10.8581' Avg. expression score in LCM sample: '13.5662' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28500 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 2 | 6 | 100.00% | 75.00% | 1 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.13962' Avg. expression score in LCM sample: '13.5662' Tissue used: 'full endosperm' |
|||||
| AT1G28500 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G28500 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.763524' Avg. embryo expression (LCM): '0' |
||||||
| AT1G28500 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.87404 x 10-1 | 15 | 13 | 53.57% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28500 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.4933 x 10-2 | 14 | 18 | 43.75% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28490 | SYP61 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.2 x 10-8 | 428 | 66 | 86.64% | 494 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28490 | SYP61 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.6074 x 10-2 | 96 | 17 | 84.96% | 113 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28490 | SYP61 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.53641 x 10-1 | 434 | 143 | 75.22% | 577 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28490 | SYP61 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.8 x 10-5 | 282 | 103 | 108 | 362 | 73.25% | 77.02% | 385 | 470 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '4.8e-06' Avg. expression score for this sample: '870.667' Avg. expression score in LCM sample: '170.643' Tissue used: 'full endosperm' |
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| AT1G28490 | SYP61 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0238 | 140 | 53 | 49 | 154 | 72.54% | 75.86% | 193 | 203 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '4.8e-06' Avg. expression score for this sample: '877.763' Avg. expression score in LCM sample: '170.643' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28490 | SYP61 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.32532 x 10-1 | 78 | 116 | 17 | 27 | 40.21% | 61.36% | 194 | 44 | TAIR8 |
Avg. embryo expression (dissected): '624.006' Avg. embryo expression (LCM): '386.867' |
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| AT1G28480 | GRX480 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.33237' Avg. embryo expression (LCM): '0' |
|||||
| AT1G28480 | GRX480 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28480 | GRX480 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28480 | GRX480 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28480 | GRX480 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '15.0917' Avg. expression score in LCM sample: '4.9091' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28480 | GRX480 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '48.0055' Avg. expression score in LCM sample: '4.9091' Tissue used: 'full endosperm' |
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| AT1G28470 | NAC010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.1 x 10-17 | 177 | 1 | 21 | 118 | 99.44% | 84.89% | 178 | 139 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.2e-17' Avg. expression score for this sample: '168.479' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G28470 | NAC010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.2e-17' Avg. expression score for this sample: '6.9144' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28470 | NAC010 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.214894' Avg. embryo expression (LCM): '0' |
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| AT1G28470 | NAC010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28470 | NAC010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 22 | 1 | 95.65% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28470 | NAC010 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.02771 x 10-1 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28460 | AGL59 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28460 | AGL59 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28460 | AGL59 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28460 | AGL59 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.475374' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28460 | AGL59 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G28460 | AGL59 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G28450 | AGL58 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G28450 | AGL58 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28450 | AGL58 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28450 | AGL58 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28450 | AGL58 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G28450 | AGL58 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28440 | HSL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.5981 x 10-2 | 300 | 168 | 153 | 239 | 64.10% | 60.97% | 468 | 392 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.434559' Avg. expression score for this sample: '241.437' Avg. expression score in LCM sample: '330.321' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28440 | HSL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.2287 x 10-2 | 441 | 207 | 282 | 722 | 68.06% | 71.91% | 648 | 1004 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.434559' Avg. expression score for this sample: '261.941' Avg. expression score in LCM sample: '330.321' Tissue used: 'full endosperm' |
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| AT1G28440 | HSL1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.47993 x 10-1 | 165 | 175 | 62 | 68 | 48.53% | 52.31% | 340 | 130 | TAIR8 |
Avg. embryo expression (dissected): '195.665' Avg. embryo expression (LCM): '150.854' |
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| AT1G28440 | HSL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.0964 x 10-2 | 79 | 21 | 79.00% | 100 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28440 | HSL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.3 x 10-18 | 226 | 20 | 91.87% | 246 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28440 | HSL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 552 | 40 | 93.24% | 592 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G28430 | CYP705A24 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28430 | CYP705A24 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28430 | CYP705A24 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G28430 | CYP705A24 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.44444 x 10-1 | 1 | 0 | 0 | 4 | 100.00% | 100.00% | 1 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.640405' Avg. expression score for this sample: '5.45769' Avg. expression score in LCM sample: '5.644' Tissue used: 'full endosperm' |
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| AT1G28430 | CYP705A24 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 1 | 2 | 75.00% | 66.67% | 4 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.640405' Avg. expression score for this sample: '5.63438' Avg. expression score in LCM sample: '5.644' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G28430 | CYP705A24 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.475982' Avg. embryo expression (LCM): '0' |
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| AT1G28420 | HB-1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.21034 x 10-1 | 274 | 317 | 93 | 130 | 46.36% | 58.30% | 591 | 223 | TAIR8 |
Avg. embryo expression (dissected): '907.996' Avg. embryo expression (LCM): '375.916' |
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| AT1G28420 | HB-1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.7 x 10-6 | 1921 | 504 | 79.22% | 2425 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |