| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G142875 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.94 x 10-7 | 6 | 74 | 12 | 51 | 7.50% | 80.95% | 80 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.90e-14' χ2 p-value for Mo17 x B73: '8.94e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G142875 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3 | 132 | 1 | 318 | 2.22% | 99.69% | 135 | 319 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.54e-36' Biased in favor of strain: 'Mo17' |
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| GRMZM2G142873 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.45 x 10-9 | 720 | 230 | 402 | 499 | 75.79% | 55.38% | 950 | 901 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.45e-09' χ2 p-value for Mo17 x B73: '6.72e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G142873 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.868 x 10-3 | 497 | 302 | 320 | 246 | 62.20% | 43.46% | 799 | 566 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.25e-12' χ2 p-value for Mo17 x B73: '.001868' Biased in favor of strain: 'B73' |
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| GRMZM2G142870 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.232122 x 10-1 | 46 | 37 | 46 | 35 | 55.42% | 43.21% | 83 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3232122' χ2 p-value for Mo17 x B73: '.2216236' Biased in favor of strain: '' |
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| GRMZM2G142870 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 3 | 75.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G142863 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.78 x 10-23 | 1648 | 497 | 1019 | 1292 | 76.83% | 55.91% | 2145 | 2311 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.78e-23' χ2 p-value for Mo17 x B73: '5.16e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G142863 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 921 | 443 | 828 | 368 | 67.52% | 30.77% | 1364 | 1196 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.59e-38' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G142836 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.733217 x 10-1 | 18 | 12 | 21 | 6 | 60.00% | 22.22% | 30 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2733217' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: '' |
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| GRMZM2G142836 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 1 | 4 | 100.00% | 80.00% | 10 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: '' |
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| GRMZM2G142834 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 3 | 0 | 33.33% | 0.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G142834 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 2 | 2 | 50.00% | 50.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G142832 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.05 x 10-6 | 10 | 43 | 5 | 32 | 18.87% | 86.49% | 53 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.82e-06' χ2 p-value for Mo17 x B73: '9.05e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G142832 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 7 | 5 | 80.00% | 41.67% | 5 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: '' |
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| GRMZM2G142825 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.859985 x 10-1 | 72 | 31 | 33 | 44 | 69.90% | 57.14% | 103 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4859985' χ2 p-value for Mo17 x B73: '.07626' Biased in favor of strain: '' |
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| GRMZM2G142825 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.886378 x 10-1 | 44 | 39 | 26 | 25 | 53.01% | 49.02% | 83 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5831281' χ2 p-value for Mo17 x B73: '.8886378' Biased in favor of strain: '' |
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| GRMZM2G142820 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.454 x 10-3 | 80 | 46 | 79 | 44 | 63.49% | 35.77% | 126 | 123 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.002454' χ2 p-value for Mo17 x B73: '.0016003' Biased in favor of strain: 'B73' |
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| GRMZM2G142820 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.553755 x 10-1 | 64 | 28 | 28 | 43 | 69.57% | 60.56% | 92 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5553755' χ2 p-value for Mo17 x B73: '.2753009' Biased in favor of strain: '' |
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| GRMZM2G142777 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G142777 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G142768 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 2 | 1 | 66.67% | 33.33% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G142768 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G142743 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.428403 x 10-1 | 172 | 97 | 116 | 159 | 63.94% | 57.82% | 269 | 275 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3428403' χ2 p-value for Mo17 x B73: '.0018536' Biased in favor of strain: '' |
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| GRMZM2G142743 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.19 x 10-8 | 396 | 251 | 360 | 188 | 61.21% | 34.31% | 647 | 548 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-08' χ2 p-value for Mo17 x B73: '2.02e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G142735 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.485063 x 10-1 | 65 | 51 | 47 | 53 | 56.03% | 53.00% | 116 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1936464' χ2 p-value for Mo17 x B73: '.5485063' Biased in favor of strain: '' |
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| GRMZM2G142735 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.126532 x 10-1 | 102 | 44 | 62 | 85 | 69.86% | 57.82% | 146 | 147 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4126532' χ2 p-value for Mo17 x B73: '.0229343' Biased in favor of strain: '' |
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| GRMZM2G142718 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 256 | 32 | 277 | 26 | 88.89% | 8.58% | 288 | 303 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G142718 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 4 | 15 | 0.00% | 78.95% | 8 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.256145' Biased in favor of strain: '' |
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| GRMZM2G142712 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.46 x 10-5 | 1131 | 447 | 1413 | 792 | 71.67% | 35.92% | 1578 | 2205 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000246' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G142712 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0 x 10-30 | 764 | 280 | 617 | 275 | 73.18% | 30.83% | 1044 | 892 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.32e-30' Biased in favor of strain: 'B73' |
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| GRMZM2G142705 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.034837 x 10-1 | 14 | 20 | 3 | 19 | 41.18% | 86.36% | 34 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3034837' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: '' |
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| GRMZM2G142705 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.23451 x 10-2 | 2 | 8 | 6 | 28 | 20.00% | 82.35% | 10 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001745' χ2 p-value for Mo17 x B73: '.0523451' Biased in favor of strain: '' |
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| GRMZM2G142685 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G142685 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.77 x 10-5 | 72 | 23 | 72 | 32 | 75.79% | 30.77% | 95 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.97e-07' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: 'B73' |
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| GRMZM2G142664 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.693273 x 10-1 | 89 | 54 | 68 | 85 | 62.24% | 55.56% | 143 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0034242' χ2 p-value for Mo17 x B73: '.1693273' Biased in favor of strain: '' |
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| GRMZM2G142664 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.434246 x 10-1 | 168 | 94 | 169 | 363 | 64.12% | 68.23% | 262 | 532 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3822361' χ2 p-value for Mo17 x B73: '.4434246' Biased in favor of strain: '' |
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| GRMZM2G142661 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.69 x 10-11 | 161 | 17 | 90 | 38 | 90.45% | 29.69% | 178 | 128 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.69e-11' χ2 p-value for Mo17 x B73: '6.99e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G142661 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1853 | 534 | 1887 | 508 | 77.63% | 21.21% | 2387 | 2395 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G142649 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 4 | 0 | 100.00% | 0.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G142649 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 1 | 100.00% | 33.33% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G142645 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G142645 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 1 | 0 | 25.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G142640 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 3 | 3 | 62.50% | 50.00% | 8 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G142640 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G142609 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.64 x 10-19 | 332 | 43 | 162 | 93 | 88.53% | 36.47% | 375 | 255 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.64e-19' χ2 p-value for Mo17 x B73: '1.47e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G142609 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.35 x 10-15 | 399 | 190 | 374 | 189 | 67.74% | 33.57% | 589 | 563 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.20e-18' χ2 p-value for Mo17 x B73: '6.35e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G142553 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.25549 x 10-2 | 14 | 0 | 11 | 2 | 100.00% | 15.38% | 14 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0125549' Biased in favor of strain: 'B73' |
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| GRMZM2G142553 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 5 | 5 | 3 | 68.75% | 37.50% | 16 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8596982' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: '' |
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| GRMZM2G142544 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.84598 x 10-2 | 14 | 29 | 12 | 48 | 32.56% | 80.00% | 43 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.09e-06' χ2 p-value for Mo17 x B73: '.0284598' Biased in favor of strain: '' |
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| GRMZM2G142544 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.30954 x 10-1 | 21 | 18 | 36 | 15 | 53.85% | 29.41% | 39 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.630954' χ2 p-value for Mo17 x B73: '.0032759' Biased in favor of strain: '' |
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| GRMZM2G142502 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.7 x 10-29 | 248 | 44 | 230 | 45 | 84.93% | 16.36% | 292 | 275 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.48e-33' χ2 p-value for Mo17 x B73: '6.70e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G142502 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.13 x 10-17 | 181 | 8 | 84 | 12 | 95.77% | 12.50% | 189 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.13e-17' χ2 p-value for Mo17 x B73: '2.11e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G142443 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.4636 x 10-3 | 569 | 229 | 376 | 496 | 71.30% | 56.88% | 798 | 872 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0054636' χ2 p-value for Mo17 x B73: '8.78e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G142443 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.7 x 10-5 | 529 | 320 | 412 | 300 | 62.31% | 42.13% | 849 | 712 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.34e-13' χ2 p-value for Mo17 x B73: '.000027' Biased in favor of strain: 'B73' |
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| GRMZM2G142413 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 6 | 3 | 2 | 25.00% | 40.00% | 8 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G142413 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.880742 x 10-1 | 19 | 14 | 7 | 19 | 57.58% | 73.08% | 33 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2679247' χ2 p-value for Mo17 x B73: '.4880742' Biased in favor of strain: '' |
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| GRMZM2G142409 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 742 | 22 | 312 | 78 | 97.12% | 20.00% | 764 | 390 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G142409 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1657 | 1008 | 1829 | 1114 | 62.18% | 37.85% | 2665 | 2943 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.02e-36' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G142390 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.618044 x 10-1 | 16 | 17 | 43 | 13 | 48.48% | 23.21% | 33 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8618044' χ2 p-value for Mo17 x B73: '.000061' Biased in favor of strain: '' |
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| GRMZM2G142390 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 2 | 5 | 100.00% | 71.43% | 5 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.7892681' Biased in favor of strain: '' |
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| GRMZM2G142379 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.854 x 10-4 | 110 | 10 | 103 | 126 | 91.67% | 55.02% | 120 | 229 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.27e-09' χ2 p-value for Mo17 x B73: '.0001854' Biased in favor of strain: 'B73' |
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| GRMZM2G142379 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.449 x 10-4 | 100 | 53 | 117 | 39 | 65.36% | 25.00% | 153 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001449' χ2 p-value for Mo17 x B73: '4.24e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G142363 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.3 x 10-6 | 798 | 455 | 541 | 400 | 63.69% | 42.51% | 1253 | 941 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.33e-22' χ2 p-value for Mo17 x B73: '4.30e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G142363 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.4 x 10-6 | 2949 | 1112 | 1477 | 2546 | 72.62% | 63.29% | 4061 | 4023 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.67e-16' χ2 p-value for Mo17 x B73: '5.40e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G142357 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G142357 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 5 | 6 | 71.43% | 54.55% | 7 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G142352 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G142352 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 2 | 100.00% | 100.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G142344 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.10416 x 10-2 | 178 | 144 | 83 | 219 | 55.28% | 72.52% | 322 | 302 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000146' χ2 p-value for Mo17 x B73: '.0310416' Biased in favor of strain: '' |
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| GRMZM2G142344 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.43959 x 10-2 | 106 | 148 | 85 | 112 | 41.73% | 56.85% | 254 | 197 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0084059' χ2 p-value for Mo17 x B73: '.0543959' Biased in favor of strain: '' |
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| GRMZM2G142342 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630246 x 10-1 | 6 | 5 | 5 | 10 | 54.55% | 66.67% | 11 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: '' |
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| GRMZM2G142342 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.02 x 10-23 | 3 | 54 | 10 | 299 | 5.26% | 96.76% | 57 | 309 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.02e-23' χ2 p-value for Mo17 x B73: '3.14e-29' Biased in favor of strain: 'Mo17' |
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| GRMZM2G142249 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.991013 x 10-1 | 119 | 66 | 130 | 297 | 64.32% | 69.56% | 185 | 427 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4991013' χ2 p-value for Mo17 x B73: '.2054726' Biased in favor of strain: '' |
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| GRMZM2G142249 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.207383 x 10-1 | 50 | 51 | 29 | 31 | 49.50% | 51.67% | 101 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9207383' χ2 p-value for Mo17 x B73: '.7962534' Biased in favor of strain: '' |
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| GRMZM2G142217 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.068274 x 10-1 | 37 | 36 | 44 | 25 | 50.68% | 36.23% | 73 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9068274' χ2 p-value for Mo17 x B73: '.0221765' Biased in favor of strain: '' |
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| GRMZM2G142217 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.014801 x 10-1 | 42 | 24 | 17 | 23 | 63.64% | 57.50% | 66 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6014801' χ2 p-value for Mo17 x B73: '.2187579' Biased in favor of strain: '' |
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| GRMZM2G142207 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.718633 x 10-1 | 241 | 158 | 209 | 444 | 60.40% | 67.99% | 399 | 653 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0079291' χ2 p-value for Mo17 x B73: '.4718633' Biased in favor of strain: '' |
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| GRMZM2G142207 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.0838 x 10-2 | 121 | 79 | 81 | 104 | 60.50% | 56.22% | 200 | 185 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0029795' χ2 p-value for Mo17 x B73: '.090838' Biased in favor of strain: '' |
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| GRMZM2G142179 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.43453 x 10-2 | 643 | 526 | 655 | 576 | 55.00% | 46.79% | 1169 | 1231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006216' χ2 p-value for Mo17 x B73: '.0243453' Biased in favor of strain: 'B73' |
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| GRMZM2G142179 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 1.68 x 10-13 | 494 | 111 | 173 | 644 | 81.65% | 78.82% | 605 | 817 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.31e-15' χ2 p-value for Mo17 x B73: '1.68e-13' Biased in favor of strain: '' |
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| GRMZM2G142157 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.144084 x 10-1 | 423 | 234 | 202 | 455 | 64.38% | 69.25% | 657 | 657 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2144084' χ2 p-value for Mo17 x B73: '.1594485' Biased in favor of strain: '' |
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| GRMZM2G142157 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.42174 x 10-1 | 103 | 91 | 113 | 118 | 53.09% | 51.08% | 194 | 231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3889353' χ2 p-value for Mo17 x B73: '.742174' Biased in favor of strain: '' |
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| GRMZM2G142150 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.574625 x 10-1 | 28 | 20 | 16 | 15 | 58.33% | 48.39% | 48 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2482131' χ2 p-value for Mo17 x B73: '.8574625' Biased in favor of strain: '' |
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| GRMZM2G142150 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.347754 x 10-1 | 38 | 13 | 19 | 19 | 74.51% | 50.00% | 51 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2347754' χ2 p-value for Mo17 x B73: '.0292983' Biased in favor of strain: '' |
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| GRMZM2G142111 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 5 | 1 | 80.00% | 16.67% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: '' |
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| GRMZM2G142111 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 3 | 2 | 4 | 57.14% | 66.67% | 7 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G142097 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.72 x 10-8 | 437 | 175 | 318 | 197 | 71.41% | 38.25% | 612 | 515 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.29e-26' χ2 p-value for Mo17 x B73: '9.72e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G142097 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.321 x 10-4 | 719 | 282 | 230 | 325 | 71.83% | 58.56% | 1001 | 555 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005321' χ2 p-value for Mo17 x B73: '.0000508' Biased in favor of strain: 'B73' |
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| GRMZM2G142088 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.42174 x 10-2 | 287 | 109 | 165 | 248 | 72.47% | 60.05% | 396 | 413 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0142174' χ2 p-value for Mo17 x B73: '.0043289' Biased in favor of strain: '' |
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| GRMZM2G142088 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.814393 x 10-1 | 253 | 174 | 177 | 164 | 59.25% | 48.09% | 427 | 341 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001318' χ2 p-value for Mo17 x B73: '.4814393' Biased in favor of strain: '' |
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| GRMZM2G142072 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.188127 x 10-1 | 811 | 746 | 768 | 772 | 52.09% | 50.13% | 1557 | 1540 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0994992' χ2 p-value for Mo17 x B73: '.9188127' Biased in favor of strain: '' |
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| GRMZM2G142072 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.571 x 10-4 | 657 | 480 | 471 | 1141 | 57.78% | 70.78% | 1137 | 1612 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.10e-10' χ2 p-value for Mo17 x B73: '.0004571' Biased in favor of strain: 'Mo17' |
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| GRMZM2G142068 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 3 | 0.00% | 75.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
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| GRMZM2G142068 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 7 | 7 | 4 | 7 | 50.00% | 63.64% | 14 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G142063 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 3 | 8 | 50.00% | 72.73% | 4 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.131668' Biased in favor of strain: '' |
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| GRMZM2G142063 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 2 | 0 | 66.67% | 0.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G142057 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.9776 x 10-3 | 31 | 4 | 34 | 11 | 88.57% | 24.44% | 35 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0059776' χ2 p-value for Mo17 x B73: '1.87e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G142057 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.7831 x 10-3 | 294 | 123 | 194 | 141 | 70.50% | 42.09% | 417 | 335 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.57e-17' χ2 p-value for Mo17 x B73: '.0037831' Biased in favor of strain: 'B73' |
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| GRMZM2G142030 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.297538 x 10-1 | 280 | 299 | 221 | 239 | 48.36% | 51.96% | 579 | 460 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4297538' χ2 p-value for Mo17 x B73: '.4013266' Biased in favor of strain: '' |
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| GRMZM2G142030 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.143256 x 10-1 | 232 | 100 | 166 | 246 | 69.88% | 59.71% | 332 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2143256' χ2 p-value for Mo17 x B73: '.0027359' Biased in favor of strain: '' |