Displaying data sets 15101 - 15200 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G45140 NRPC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 88 37 70.40% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45140 NRPC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.8 x 10-5 204 37 84.65% 241 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45130 RHA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '513.385'
Avg. expression score in LCM sample: '160.898'
Tissue used: 'pure endosperm, no chalazal'
AT5G45130 RHA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '517.434'
Avg. expression score in LCM sample: '160.898'
Tissue used: 'full endosperm'
AT5G45130 RHA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '318.307'
Avg. embryo expression (LCM): '158.15'
AT5G45130 RHA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45130 RHA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45130 RHA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.521521'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 3 50.00% 100.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.830575'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.196828'
Avg. embryo expression (LCM): '0'
AT5G45120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45113 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.51642 x 10-1 1 6 0 17 14.29% 100.00% 7 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.251668'
Avg. expression score for this sample: '4.79339'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'pure endosperm, no chalazal'
AT5G45113 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.1622 x 10-1 17 24 0 49 41.46% 100.00% 41 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.251668'
Avg. expression score for this sample: '12.6693'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'full endosperm'
AT5G45113 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.33213 x 10-1 0 13 0 6 0.00% 100.00% 13 6 TAIR8 Avg. embryo expression (dissected): '9.45492'
Avg. embryo expression (LCM): '2.02193'
AT5G45113 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.70999 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45113 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.34751 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45113 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.69565 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45110 NPR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.423 x 10-3 383 149 124 363 71.99% 74.54% 532 487 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.9e-34'
Avg. expression score for this sample: '331.288'
Avg. expression score in LCM sample: '31.2184'
Tissue used: 'pure endosperm, no chalazal'
AT5G45110 NPR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 872 197 355 1469 81.57% 80.54% 1069 1824 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.9e-34'
Avg. expression score for this sample: '756.942'
Avg. expression score in LCM sample: '31.2184'
Tissue used: 'full endosperm'
AT5G45110 NPR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.266 x 10-2 95 60 18 24 61.29% 57.14% 155 42 TAIR8 Avg. embryo expression (dissected): '107.46'
Avg. embryo expression (LCM): '28.8094'
AT5G45110 NPR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.26672 x 10-1 163 56 74.43% 219 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45110 NPR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 661 24 96.50% 685 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45110 NPR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1197 42 96.61% 1239 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45105 ZIP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45105 ZIP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45105 ZIP8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.787763'
Avg. embryo expression (LCM): '0'
AT5G45105 ZIP8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45105 ZIP8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45105 ZIP8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45100 BRG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.06307 x 10-1 204 174 79 397 53.97% 83.40% 378 476 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.3e-07'
Avg. expression score for this sample: '200.571'
Avg. expression score in LCM sample: '18.8133'
Tissue used: 'pure endosperm, no chalazal'
AT5G45100 BRG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8 x 10-10 115 44 44 321 72.33% 87.95% 159 365 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.3e-07'
Avg. expression score for this sample: '98.2247'
Avg. expression score in LCM sample: '18.8133'
Tissue used: 'full endosperm'
AT5G45100 BRG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.74 x 10-4 339 563 67 125 37.58% 65.10% 902 192 TAIR8 Avg. embryo expression (dissected): '374.504'
Avg. embryo expression (LCM): '110.365'
AT5G45100 BRG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.02 x 10-4 84 8 91.30% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45100 BRG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.2 x 10-13 248 17 93.58% 265 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45100 BRG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-8 195 19 91.12% 214 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.20137'
Avg. expression score in LCM sample: '2.61623'
Tissue used: 'pure endosperm, no chalazal'
AT5G45095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.74482'
Avg. expression score in LCM sample: '2.61623'
Tissue used: 'full endosperm'
AT5G45095 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.172605'
Avg. embryo expression (LCM): '0'
AT5G45095 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45095 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45095 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45090 PP2-A7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45090 PP2-A7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.167969'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45090 PP2-A7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G45090 PP2-A7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45090 PP2-A7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45090 PP2-A7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45080 PP2-A6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45080 PP2-A6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45080 PP2-A6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.06748'
AT5G45080 PP2-A6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45080 PP2-A6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45080 PP2-A6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45070 PP2-A8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.58532'
Avg. expression score in LCM sample: '4.2036'
Tissue used: 'pure endosperm, no chalazal'
AT5G45070 PP2-A8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.97904'
Avg. expression score in LCM sample: '4.2036'
Tissue used: 'full endosperm'
AT5G45070 PP2-A8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.36123'
Avg. embryo expression (LCM): '1.79588'
AT5G45070 PP2-A8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45070 PP2-A8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45070 PP2-A8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.75527 x 10-1 60 66 20 100 47.62% 83.33% 126 120 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.031033'
Avg. expression score for this sample: '17.0688'
Avg. expression score in LCM sample: '8.62768'
Tissue used: 'pure endosperm, no chalazal'
AT5G45060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.479 x 10-3 199 127 108 428 61.04% 79.85% 326 536 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.031033'
Avg. expression score for this sample: '35.4479'
Avg. expression score in LCM sample: '8.62768'
Tissue used: 'full endosperm'
AT5G45060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.17527 x 10-1 139 92 51 46 60.17% 47.42% 231 97 TAIR8 Avg. embryo expression (dissected): '36.1163'
Avg. embryo expression (LCM): '29.4624'
AT5G45060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.58582 x 10-1 43 15 74.14% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-10 204 22 90.27% 226 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2 x 10-8 165 20 89.19% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45050 TTR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.12686 x 10-1 58 20 31 54 74.36% 63.53% 78 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232694'
Avg. expression score for this sample: '26.6777'
Avg. expression score in LCM sample: '16.3882'
Tissue used: 'pure endosperm, no chalazal'
AT5G45050 TTR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.40353 x 10-1 147 68 76 195 68.37% 71.96% 215 271 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232694'
Avg. expression score for this sample: '59.1393'
Avg. expression score in LCM sample: '16.3882'
Tissue used: 'full endosperm'
AT5G45050 TTR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.30927 x 10-1 65 40 19 12 61.90% 38.71% 105 31 TAIR8 Avg. embryo expression (dissected): '34.7498'
Avg. embryo expression (LCM): '28.6084'
AT5G45050 TTR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.268 x 10-3 47 7 87.04% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45050 TTR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4 x 10-16 222 14 94.07% 236 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45050 TTR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-25 371 19 95.13% 390 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45040 CYTC6A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.719626'
Avg. expression score in LCM sample: '4.05662'
Tissue used: 'pure endosperm, no chalazal'
AT5G45040 CYTC6A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.76849'
Avg. expression score in LCM sample: '4.05662'
Tissue used: 'full endosperm'
AT5G45040 CYTC6A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.47239'
Avg. embryo expression (LCM): '3.46617'
AT5G45040 CYTC6A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45040 CYTC6A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45040 CYTC6A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.27226 x 10-1 96 33 65 76 74.42% 53.90% 129 141 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014893'
Avg. expression score for this sample: '555.192'
Avg. expression score in LCM sample: '153.329'
Tissue used: 'pure endosperm, no chalazal'
AT5G45030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.55 x 10-4 206 55 70 205 78.93% 74.55% 261 275 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014893'
Avg. expression score for this sample: '669.187'
Avg. expression score in LCM sample: '153.329'
Tissue used: 'full endosperm'
AT5G45030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.2473 x 10-1 89 71 39 25 55.62% 39.06% 160 64 TAIR8 Avg. embryo expression (dissected): '906.939'
Avg. embryo expression (LCM): '496.918'
AT5G45030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.02116 x 10-1 42 10 80.77% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-16 206 9 95.81% 215 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-8 320 48 86.96% 368 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.63083 x 10-1 167 92 110 254 64.48% 69.78% 259 364 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.729822'
Avg. expression score for this sample: '130.342'
Avg. expression score in LCM sample: '57.3366'
Tissue used: 'pure endosperm, no chalazal'
AT5G45020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.21547 x 10-1 158 82 125 213 65.83% 63.02% 240 338 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.729822'
Avg. expression score for this sample: '96.7511'
Avg. expression score in LCM sample: '57.3366'
Tissue used: 'full endosperm'
AT5G45020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.247 x 10-3 120 62 26 32 65.93% 55.17% 182 58 TAIR8 Avg. embryo expression (dissected): '77.5125'
Avg. embryo expression (LCM): '15.9996'
AT5G45020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.07662 x 10-1 30 10 75.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.1 x 10-5 121 27 81.76% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-5 111 22 83.46% 133 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45010 DSS1(V) endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1160.1'
Avg. expression score in LCM sample: '577.775'
Tissue used: 'pure endosperm, no chalazal'
AT5G45010 DSS1(V) endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '778.327'
Avg. expression score in LCM sample: '577.775'
Tissue used: 'full endosperm'
AT5G45010 DSS1(V) embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1356.04'
Avg. embryo expression (LCM): '1353.3'
AT5G45010 DSS1(V) endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45010 DSS1(V) endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45010 DSS1(V) endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.17507'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'pure endosperm, no chalazal'
AT5G45000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.54359'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'full endosperm'