| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G29830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '8.49757' Avg. expression score in LCM sample: '.63201' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29830 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.5922' Avg. embryo expression (LCM): '2.17263' |
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| AT1G29830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G29830 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G29820 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-24 | 377 | 26 | 93.55% | 403 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29820 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.0433 x 10-2 | 125 | 187 | 47 | 52 | 40.06% | 52.53% | 312 | 99 | TAIR8 |
Avg. embryo expression (dissected): '150.331' Avg. embryo expression (LCM): '63.1571' |
||||
| AT1G29820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 318 | 8 | 97.55% | 326 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.71607 x 10-1 | 81 | 35 | 69.83% | 116 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.28826 x 10-1 | 178 | 98 | 71 | 235 | 64.49% | 76.80% | 276 | 306 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000358' Avg. expression score for this sample: '137.101' Avg. expression score in LCM sample: '43.256' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.441 x 10-3 | 469 | 189 | 214 | 578 | 71.28% | 72.98% | 658 | 792 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000358' Avg. expression score for this sample: '280.069' Avg. expression score in LCM sample: '43.256' Tissue used: 'full endosperm' |
|||||
| AT1G29810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.32754 x 10-1 | 69 | 37 | 28 | 70 | 65.09% | 71.43% | 106 | 98 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.403973' Avg. expression score for this sample: '37.9907' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G29810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.43351 x 10-1 | 22 | 7 | 8 | 28 | 75.86% | 77.78% | 29 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.403973' Avg. expression score for this sample: '18.2953' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G29810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.4 x 10-6 | 41 | 0 | 100.00% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29810 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.4387 x 10-2 | 42 | 7 | 85.71% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29810 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.2191 x 10-1 | 22 | 42 | 2 | 3 | 34.38% | 60.00% | 64 | 5 | TAIR8 |
Avg. embryo expression (dissected): '18.5561' Avg. embryo expression (LCM): '15.535' |
||||
| AT1G29810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 4 | 71.43% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.24361 x 10-1 | 48 | 5 | 90.57% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.75115 x 10-1 | 41 | 17 | 16 | 54 | 70.69% | 77.14% | 58 | 70 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.0e-06' Avg. expression score for this sample: '35.2944' Avg. expression score in LCM sample: '21.3708' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G29800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.1 x 10-7 | 105 | 22 | 20 | 135 | 82.68% | 87.10% | 127 | 155 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.0e-06' Avg. expression score for this sample: '54.1237' Avg. expression score in LCM sample: '21.3708' Tissue used: 'full endosperm' |
|||||
| AT1G29800 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.50126 x 10-1 | 17 | 24 | 5 | 9 | 41.46% | 64.29% | 41 | 14 | TAIR8 |
Avg. embryo expression (dissected): '24.9649' Avg. embryo expression (LCM): '17.6071' |
||||
| AT1G29800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.5295 x 10-2 | 306 | 44 | 87.43% | 350 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29800 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.4508 x 10-2 | 253 | 35 | 87.85% | 288 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29790 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 340 | 9 | 97.42% | 349 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29790 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.46251 x 10-1 | 50 | 58 | 22 | 21 | 46.30% | 48.84% | 108 | 43 | TAIR8 |
Avg. embryo expression (dissected): '263.59' Avg. embryo expression (LCM): '206.953' |
||||
| AT1G29790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.9 x 10-6 | 105 | 15 | 87.50% | 120 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 44 | 21 | 67.69% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 326 | 92 | 185 | 224 | 77.99% | 54.77% | 418 | 409 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.580649' Avg. expression score for this sample: '585.27' Avg. expression score in LCM sample: '248.645' Tissue used: 'full endosperm' |
|||||
| AT1G29790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.69068 x 10-1 | 76 | 30 | 37 | 102 | 71.70% | 73.38% | 106 | 139 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.580649' Avg. expression score for this sample: '287.91' Avg. expression score in LCM sample: '248.645' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29785 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.36889 x 10-1 | 14 | 15 | 4 | 19 | 48.28% | 82.61% | 29 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.82417' Avg. expression score for this sample: '26.489' Avg. expression score in LCM sample: '25.9124' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G29785 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 22 | 25 | 19 | 62 | 46.81% | 76.54% | 47 | 81 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.82417' Avg. expression score for this sample: '39.2045' Avg. expression score in LCM sample: '25.9124' Tissue used: 'full endosperm' |
|||||
| AT1G29785 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.00667 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29785 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.775 x 10-2 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29785 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.26434 x 10-1 | 20 | 19 | 0 | 6 | 51.28% | 100.00% | 39 | 6 | TAIR8 |
Avg. embryo expression (dissected): '28.3572' Avg. embryo expression (LCM): '30.1908' |
||||
| AT1G29785 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0234 | 14 | 1 | 93.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.64286 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.95129' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G29780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.16291' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.9926' Avg. embryo expression (LCM): '1.88379' |
|||||
| AT1G29780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29770 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.9431 x 10-2 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29770 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.6922 x 10-2 | 20 | 5 | 4 | 4 | 80.00% | 50.00% | 25 | 8 | TAIR8 |
Avg. embryo expression (dissected): '10.2821' Avg. embryo expression (LCM): '9.23055' |
||||
| AT1G29770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.72415 x 10-1 | 4 | 3 | 57.14% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.07921 x 10-1 | 19 | 4 | 10 | 4 | 82.61% | 28.57% | 23 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '9.68873' Avg. expression score in LCM sample: '2.39576' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.84078 x 10-1 | 14 | 4 | 0 | 3 | 77.78% | 100.00% | 18 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.22687' Avg. expression score in LCM sample: '2.39576' Tissue used: 'full endosperm' |
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| AT1G29760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.4 x 10-5 | 350 | 84 | 107 | 273 | 80.65% | 71.84% | 434 | 380 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000713' Avg. expression score for this sample: '499.067' Avg. expression score in LCM sample: '208.49' Tissue used: 'full endosperm' |
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| AT1G29760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 172 | 52 | 108 | 147 | 76.79% | 57.65% | 224 | 255 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000713' Avg. expression score for this sample: '299.233' Avg. expression score in LCM sample: '208.49' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.5 x 10-10 | 223 | 24 | 90.28% | 247 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 475 | 9 | 98.14% | 484 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.19161 x 10-1 | 64 | 52 | 22 | 15 | 55.17% | 40.54% | 116 | 37 | TAIR8 |
Avg. embryo expression (dissected): '136.436' Avg. embryo expression (LCM): '47.7728' |
||||
| AT1G29760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.7991 x 10-2 | 56 | 34 | 62.22% | 90 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29750 | RKF1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.86719 x 10-1 | 49 | 9 | 84.48% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G29750 | RKF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.2572 x 10-2 | 51 | 20 | 10 | 56 | 71.83% | 84.85% | 71 | 66 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001278' Avg. expression score for this sample: '20.8035' Avg. expression score in LCM sample: '7.70171' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29750 | RKF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.4433 x 10-2 | 122 | 40 | 44 | 137 | 75.31% | 75.69% | 162 | 181 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001278' Avg. expression score for this sample: '41.4145' Avg. expression score in LCM sample: '7.70171' Tissue used: 'full endosperm' |
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| AT1G29750 | RKF1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.55145 x 10-1 | 87 | 89 | 28 | 35 | 49.43% | 55.56% | 176 | 63 | TAIR8 |
Avg. embryo expression (dissected): '63.0523' Avg. embryo expression (LCM): '54.7177' |
|||
| AT1G29750 | RKF1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.5 x 10-22 | 268 | 2 | 99.26% | 270 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G29750 | RKF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.7 x 10-21 | 401 | 13 | 96.86% | 414 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G29740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.806 x 10-3 | 76 | 5 | 93.83% | 81 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.0372 x 10-1 | 24 | 82 | 18 | 59 | 22.64% | 76.62% | 106 | 77 | TAIR8 |
Avg. embryo expression (dissected): '28.5245' Avg. embryo expression (LCM): '7.23374' |
||||
| AT1G29740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.0191 x 10-2 | 66 | 31 | 68.04% | 97 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.91714 x 10-1 | 2 | 2 | 50.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.74 x 10-4 | 77 | 20 | 21 | 98 | 79.38% | 82.35% | 97 | 119 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000183' Avg. expression score for this sample: '12.6754' Avg. expression score in LCM sample: '1.411' Tissue used: 'full endosperm' |
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| AT1G29740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.7645 x 10-2 | 37 | 17 | 11 | 57 | 68.52% | 83.82% | 54 | 68 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000183' Avg. expression score for this sample: '9.35272' Avg. expression score in LCM sample: '1.411' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | MEG | 8.901 x 10-3 | 12 | 0 | 0 | 10 | 100.00% | 100.00% | 12 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000982' Avg. expression score for this sample: '10.3863' Avg. expression score in LCM sample: '5.82037' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | MEG | 3.4324 x 10-2 | 36 | 3 | 4 | 8 | 92.31% | 66.67% | 39 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000982' Avg. expression score for this sample: '10.4129' Avg. expression score in LCM sample: '5.82037' Tissue used: 'full endosperm' |
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| AT1G29730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.142 x 10-3 | 11 | 8 | 57.89% | 19 | TAIR8 | Mutant effect: 'MEG not affected by met1, dme or fie' | ||||||||
| AT1G29730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.36733 x 10-1 | 53 | 1 | 98.15% | 54 | TAIR8 | Mutant effect: 'MEG not affected by met1, dme or fie' | ||||||||
| AT1G29730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 6 | 1 | 4 | 45.45% | 80.00% | 11 | 5 | TAIR8 |
Avg. embryo expression (dissected): '8.17097' Avg. embryo expression (LCM): '2.90103' |
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| AT1G29730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.08108 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'MEG not affected by met1, dme or fie' | ||||||||
| AT1G29724 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G29724 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G29724 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29724 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G29724 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G29724 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G29720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G29720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '4.87162' Avg. embryo expression (LCM): '.929335' |
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| AT1G29720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G29720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.754161' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.16688' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G29710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.876 x 10-3 | 31 | 8 | 5 | 47 | 79.49% | 90.38% | 39 | 52 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.013715' Avg. expression score for this sample: '60.4258' Avg. expression score in LCM sample: '28.8373' Tissue used: 'full endosperm' |
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| AT1G29710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.25139 x 10-1 | 16 | 4 | 10 | 17 | 80.00% | 62.96% | 20 | 27 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.013715' Avg. expression score for this sample: '42.0201' Avg. expression score in LCM sample: '28.8373' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.3739 x 10-1 | 42 | 9 | 82.35% | 51 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.10339 x 10-1 | 33 | 15 | 68.75% | 48 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.85782 x 10-1 | 10 | 4 | 71.43% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.27243 x 10-1 | 16 | 13 | 6 | 7 | 55.17% | 53.85% | 29 | 13 | TAIR8 |
Avg. embryo expression (dissected): '71.0777' Avg. embryo expression (LCM): '67.7661' |
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| AT1G29700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 13 | 7 | 5 | 1 | 65.00% | 16.67% | 20 | 6 | TAIR8 |
Avg. embryo expression (dissected): '28.91' Avg. embryo expression (LCM): '18.6369' |
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| AT1G29700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.30046 x 10-1 | 18 | 1 | 94.74% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.14567 x 10-1 | 9 | 12 | 7 | 17 | 42.86% | 70.83% | 21 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.013725' Avg. expression score for this sample: '29.6902' Avg. expression score in LCM sample: '11.9935' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G29700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.4 x 10-4 | 53 | 8 | 8 | 53 | 86.89% | 86.89% | 61 | 61 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.013725' Avg. expression score for this sample: '41.7571' Avg. expression score in LCM sample: '11.9935' Tissue used: 'full endosperm' |
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| AT1G29700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.2004 x 10-2 | 41 | 4 | 91.11% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.02 x 10-4 | 41 | 0 | 100.00% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G29690 | CAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.24583 x 10-1 | 19 | 4 | 82.61% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G29690 | CAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.342 x 10-3 | 38 | 2 | 95.00% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G29690 | CAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 3 | 76.92% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G29690 | CAD1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.77086 x 10-1 | 12 | 10 | 0 | 4 | 54.55% | 100.00% | 22 | 4 | TAIR8 |
Avg. embryo expression (dissected): '151.489' Avg. embryo expression (LCM): '65.2669' |
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| AT1G29690 | CAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.06322 x 10-1 | 26 | 18 | 13 | 65 | 59.09% | 83.33% | 44 | 78 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.385775' Avg. expression score for this sample: '254.762' Avg. expression score in LCM sample: '22.3849' Tissue used: 'full endosperm' |
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| AT1G29690 | CAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.91071 x 10-1 | 10 | 9 | 3 | 9 | 52.63% | 75.00% | 19 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.385775' Avg. expression score for this sample: '104.453' Avg. expression score in LCM sample: '22.3849' Tissue used: 'pure endosperm, no chalazal' |