Displaying data sets 151001 - 151100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G29965 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.981 x 10-3 181 28 86.60% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29965 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.05663 x 10-1 73 99 20 19 42.44% 48.72% 172 39 TAIR8 Avg. embryo expression (dissected): '577.16'
Avg. embryo expression (LCM): '711.104'
AT1G29962 AGL64 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.56367'
Avg. embryo expression (LCM): '0'
AT1G29962 AGL64 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 11 52.17% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29962 AGL64 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29962 AGL64 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 22 13 62.86% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29962 AGL64 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G29962 AGL64 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G29960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4749 x 10-1 29 3 9 5 90.62% 35.71% 32 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '51.6232'
Avg. expression score in LCM sample: '17.3729'
Tissue used: 'pure endosperm, no chalazal'
AT1G29960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-4 38 1 97.44% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.06485 x 10-1 18 3 11 4 85.71% 26.67% 21 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.4144'
Avg. expression score in LCM sample: '17.3729'
Tissue used: 'full endosperm'
AT1G29960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.775 x 10-2 10 15 40.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1632 x 10-2 32 7 2 1 82.05% 33.33% 39 3 TAIR8 Avg. embryo expression (dissected): '80.6069'
Avg. embryo expression (LCM): '55.308'
AT1G29960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29952 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 19 8 70.37% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29952 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.8704 x 10-2 120 40 45 109 75.00% 70.78% 160 154 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.235597'
Avg. expression score for this sample: '407.357'
Avg. expression score in LCM sample: '136.191'
Tissue used: 'full endosperm'
AT1G29952 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.06642 x 10-1 48 31 25 58 60.76% 69.88% 79 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.235597'
Avg. expression score for this sample: '314.635'
Avg. expression score in LCM sample: '136.191'
Tissue used: 'pure endosperm, no chalazal'
AT1G29952 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-18 298 19 94.01% 317 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29952 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.4878 x 10-1 78 84 28 29 48.15% 50.88% 162 57 TAIR8 Avg. embryo expression (dissected): '699.672'
Avg. embryo expression (LCM): '547.918'
AT1G29952 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-7 124 12 91.18% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29951 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.21405 x 10-1 20 7 74.07% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29951 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 27 39 8 21 40.91% 72.41% 66 29 TAIR8 Avg. embryo expression (dissected): '183.692'
Avg. embryo expression (LCM): '126.076'
AT1G29951 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.11768 x 10-1 6 5 54.55% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29951 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-5 94 8 92.16% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29951 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.05279 x 10-1 44 8 21 36 84.62% 63.16% 52 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.475444'
Avg. expression score for this sample: '90.6831'
Avg. expression score in LCM sample: '34.0551'
Tissue used: 'full endosperm'
AT1G29951 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 19 14 5 17 57.58% 77.27% 33 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.475444'
Avg. expression score for this sample: '70.7808'
Avg. expression score in LCM sample: '34.0551'
Tissue used: 'pure endosperm, no chalazal'
AT1G29950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.81268 x 10-1 62 41 39 75 60.19% 65.79% 103 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02869'
Avg. expression score for this sample: '59.7411'
Avg. expression score in LCM sample: '26.8678'
Tissue used: 'pure endosperm, no chalazal'
AT1G29950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-14 336 31 91.55% 367 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.55 x 10-4 162 49 58 189 76.78% 76.52% 211 247 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02869'
Avg. expression score for this sample: '85.8972'
Avg. expression score in LCM sample: '26.8678'
Tissue used: 'full endosperm'
AT1G29950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.65784 x 10-1 111 109 28 32 50.45% 53.33% 220 60 TAIR8 Avg. embryo expression (dissected): '124.443'
Avg. embryo expression (LCM): '106.572'
AT1G29950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-6 123 13 90.44% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 40 15 72.73% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29940 NRPA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.81361 x 10-1 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29940 NRPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.4567 x 10-2 10 1 19 2 90.91% 9.52% 11 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.016888'
Avg. expression score for this sample: '24.5457'
Avg. expression score in LCM sample: '15.227'
Tissue used: 'full endosperm'
AT1G29940 NRPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 5 0 6 0 100.00% 0.00% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.016888'
Avg. expression score for this sample: '19.0088'
Avg. expression score in LCM sample: '15.227'
Tissue used: 'pure endosperm, no chalazal'
AT1G29940 NRPA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-14 80 1 98.77% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29940 NRPA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.71 x 10-4 8 65 10.96% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29940 NRPA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.4185 x 10-2 36 4 11 0 90.00% 0.00% 40 11 TAIR8 Avg. embryo expression (dissected): '68.3404'
Avg. embryo expression (LCM): '97.2787'
AT1G29930 CAB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.38 x 10-4 181 36 76 15 83.41% 16.48% 217 91 TAIR8 Avg. embryo expression (dissected): '14573.5'
Avg. embryo expression (LCM): '5794.04'
AT1G29930 CAB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.34296 x 10-1 6 7 46.15% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29930 CAB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.9 x 10-5 2 14 12.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29930 CAB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29930 CAB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.53585 x 10-1 100 15 41 26 86.96% 38.81% 115 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.809536'
Avg. expression score for this sample: '2658.26'
Avg. expression score in LCM sample: '2528.1'
Tissue used: 'full endosperm'
AT1G29930 CAB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.20677 x 10-1 83 16 47 18 83.84% 27.69% 99 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.809536'
Avg. expression score for this sample: '5910.11'
Avg. expression score in LCM sample: '2528.1'
Tissue used: 'pure endosperm, no chalazal'
AT1G29920 CAB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.11508 x 10-1 771 154 348 190 83.35% 35.32% 925 538 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.429313'
Avg. expression score for this sample: '1693.46'
Avg. expression score in LCM sample: '1353.46'
Tissue used: 'pure endosperm, no chalazal'
AT1G29920 CAB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.77 x 10-4 63 9 87.50% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29920 CAB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.83863 x 10-1 1679 348 594 352 82.83% 37.21% 2027 946 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.429313'
Avg. expression score for this sample: '1228.46'
Avg. expression score in LCM sample: '1353.46'
Tissue used: 'full endosperm'
AT1G29920 CAB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29920 CAB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.3 x 10-17 864 319 144 39 73.03% 21.31% 1183 183 TAIR8 Avg. embryo expression (dissected): '2868.37'
Avg. embryo expression (LCM): '2597.21'
AT1G29920 CAB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 65 174 27.20% 239 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29910 CAB3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.89641 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29910 CAB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 63 25 20 29 71.59% 59.18% 88 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.650834'
Avg. expression score for this sample: '667.964'
Avg. expression score in LCM sample: '393.772'
Tissue used: 'full endosperm'
AT1G29910 CAB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.69197 x 10-1 25 6 4 7 80.65% 63.64% 31 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.650834'
Avg. expression score for this sample: '1039.78'
Avg. expression score in LCM sample: '393.772'
Tissue used: 'pure endosperm, no chalazal'
AT1G29910 CAB3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29910 CAB3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.9077 x 10-1 47 46 9 4 50.54% 30.77% 93 13 TAIR8 Avg. embryo expression (dissected): '3381.4'
Avg. embryo expression (LCM): '1678.58'
AT1G29910 CAB3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29900 CARB endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.60608 x 10-1 28 7 80.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29900 CARB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 11 7 1 1 61.11% 50.00% 18 2 TAIR8 Avg. embryo expression (dissected): '517.999'
Avg. embryo expression (LCM): '573.914'
AT1G29900 CARB endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29900 CARB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.15 x 10-4 43 2 95.56% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29900 CARB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 23 3 19 24 88.46% 55.81% 26 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.734692'
Avg. expression score for this sample: '203.156'
Avg. expression score in LCM sample: '116.275'
Tissue used: 'full endosperm'
AT1G29900 CARB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 0 3 60.00% 100.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.734692'
Avg. expression score for this sample: '127.657'
Avg. expression score in LCM sample: '116.275'
Tissue used: 'pure endosperm, no chalazal'
AT1G29890 RWA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 1 3 2 90.00% 40.00% 10 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029025'
Avg. expression score for this sample: '60.6454'
Avg. expression score in LCM sample: '38.4203'
Tissue used: 'pure endosperm, no chalazal'
AT1G29890 RWA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.865 x 10-3 78 3 96.30% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29890 RWA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0381 31 4 9 31 88.57% 77.50% 35 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029025'
Avg. expression score for this sample: '95.4982'
Avg. expression score in LCM sample: '38.4203'
Tissue used: 'full endosperm'
AT1G29890 RWA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 6 8 3 2 42.86% 40.00% 14 5 TAIR8 Avg. embryo expression (dissected): '66.1467'
Avg. embryo expression (LCM): '29.4122'
AT1G29890 RWA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.51877 x 10-1 28 2 93.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29890 RWA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.0218 x 10-2 18 3 10 38 85.71% 79.17% 21 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323271'
Avg. expression score for this sample: '147.393'
Avg. expression score in LCM sample: '107.236'
Tissue used: 'full endosperm'
AT1G29880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.35156 x 10-1 14 15 4 17 48.28% 80.95% 29 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323271'
Avg. expression score for this sample: '163.644'
Avg. expression score in LCM sample: '107.236'
Tissue used: 'pure endosperm, no chalazal'
AT1G29880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.86862 x 10-1 55 13 80.88% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.13852 x 10-1 60 12 83.33% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.11679 x 10-1 25 32 7 6 43.86% 46.15% 57 13 TAIR8 Avg. embryo expression (dissected): '384.762'
Avg. embryo expression (LCM): '356.488'
AT1G29870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G29870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 6 66.67% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.120671'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G29870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.37618'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G29860 WRKY71 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G29860 WRKY71 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29860 WRKY71 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.739236'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G29860 WRKY71 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29860 WRKY71 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G29860 WRKY71 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.9971 x 10-2 67 14 82.72% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.322 x 10-3 90 35 80 277 72.00% 77.59% 125 357 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027729'
Avg. expression score for this sample: '246.088'
Avg. expression score in LCM sample: '38.0529'
Tissue used: 'full endosperm'
AT1G29850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.83407 x 10-1 40 31 28 51 56.34% 64.56% 71 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027729'
Avg. expression score for this sample: '108.707'
Avg. expression score in LCM sample: '38.0529'
Tissue used: 'pure endosperm, no chalazal'
AT1G29850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-10 365 48 88.38% 413 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 43 44 4 3 49.43% 42.86% 87 7 TAIR8 Avg. embryo expression (dissected): '105.265'
Avg. embryo expression (LCM): '164.141'
AT1G29850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.84 x 10-4 265 54 83.07% 319 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.6718'
Avg. embryo expression (LCM): '20.7844'
AT1G29840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '26.5317'
Avg. expression score in LCM sample: '7.15788'
Tissue used: 'full endosperm'
AT1G29840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.8435'
Avg. expression score in LCM sample: '7.15788'
Tissue used: 'pure endosperm, no chalazal'
AT1G29830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.49757'
Avg. expression score in LCM sample: '.63201'
Tissue used: 'pure endosperm, no chalazal'
AT1G29830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'