Displaying data sets 150901 - 151000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G30120 PDH-E1 BETA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.77946 x 10-1 20 7 74.07% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30120 PDH-E1 BETA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.40752 x 10-1 310 282 96 107 52.36% 52.71% 592 203 TAIR8 Avg. embryo expression (dissected): '4865.63'
Avg. embryo expression (LCM): '2989.18'
AT1G30120 PDH-E1 BETA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.27 x 10-4 133 27 83.12% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30120 PDH-E1 BETA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.909 x 10-2 89 23 79.46% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30120 PDH-E1 BETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.33313 x 10-1 208 69 88 124 75.09% 58.49% 277 212 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.185591'
Avg. expression score for this sample: '2376.6'
Avg. expression score in LCM sample: '981.424'
Tissue used: 'pure endosperm, no chalazal'
AT1G30120 PDH-E1 BETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.48612 x 10-1 148 52 105 236 74.00% 69.21% 200 341 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.185591'
Avg. expression score for this sample: '1329.17'
Avg. expression score in LCM sample: '981.424'
Tissue used: 'full endosperm'
AT1G30110 NUDX25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 8 2 13 52.94% 86.67% 17 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '96.4136'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G30110 NUDX25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.4794'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G30110 NUDX25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30110 NUDX25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30110 NUDX25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '36.6813'
Avg. embryo expression (LCM): '12.4204'
AT1G30110 NUDX25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.52941 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30100 NCED5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30100 NCED5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30100 NCED5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.941097'
Avg. embryo expression (LCM): '0'
AT1G30100 NCED5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.128644'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G30100 NCED5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.45757'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G30100 NCED5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.15203 x 10-1 37 12 75.51% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.88408 x 10-1 42 49 11 10 46.15% 47.62% 91 21 TAIR8 Avg. embryo expression (dissected): '216.271'
Avg. embryo expression (LCM): '102.315'
AT1G30090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.3 x 10-16 272 20 93.15% 292 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.08 x 10-4 107 16 86.99% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6991 x 10-2 120 41 48 137 74.53% 74.05% 161 185 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.191141'
Avg. expression score for this sample: '395.144'
Avg. expression score in LCM sample: '148.081'
Tissue used: 'full endosperm'
AT1G30090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.72687 x 10-1 74 41 30 53 64.35% 63.86% 115 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.191141'
Avg. expression score for this sample: '305.605'
Avg. expression score in LCM sample: '148.081'
Tissue used: 'pure endosperm, no chalazal'
AT1G30080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.494691'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G30080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.349057'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G30080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.59895'
Avg. embryo expression (LCM): '0'
AT1G30080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8 x 10-17 391 26 93.76% 417 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.54128 x 10-1 144 40 78.26% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.92854 x 10-1 153 177 50 84 46.36% 62.69% 330 134 TAIR8 Avg. embryo expression (dissected): '1872.72'
Avg. embryo expression (LCM): '317.28'
AT1G30070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9 x 10-14 400 118 174 722 77.22% 80.58% 518 896 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-14'
Avg. expression score for this sample: '1514.33'
Avg. expression score in LCM sample: '40.3899'
Tissue used: 'full endosperm'
AT1G30070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0638 x 10-2 219 89 92 274 71.10% 74.86% 308 366 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-14'
Avg. expression score for this sample: '1891.33'
Avg. expression score in LCM sample: '40.3899'
Tissue used: 'pure endosperm, no chalazal'
AT1G30070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7 x 10-7 275 32 89.58% 307 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.7227'
Avg. embryo expression (LCM): '0'
AT1G30060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.95814'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G30060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '32.458'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G30050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.33035'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G30050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.174134'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G30050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.16439'
Avg. embryo expression (LCM): '0'
AT1G30050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30040 GA2OX2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30040 GA2OX2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30040 GA2OX2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '135.818'
Avg. embryo expression (LCM): '99.2128'
AT1G30040 GA2OX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.01535'
Avg. expression score in LCM sample: '6.27601'
Tissue used: 'pure endosperm, no chalazal'
AT1G30040 GA2OX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.3103'
Avg. expression score in LCM sample: '6.27601'
Tissue used: 'full endosperm'
AT1G30040 GA2OX2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.8206'
Avg. embryo expression (LCM): '29.2113'
AT1G30020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.56429'
Avg. expression score in LCM sample: '9.31848'
Tissue used: 'full endosperm'
AT1G30020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.9153'
Avg. expression score in LCM sample: '9.31848'
Tissue used: 'pure endosperm, no chalazal'
AT1G30016 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G30016 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G30016 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30016 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30016 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G30016 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30010 nMAT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 40 11 78.43% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30010 nMAT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 21 6 77.78% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30010 nMAT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.62554 x 10-1 7 10 3 2 41.18% 40.00% 17 5 TAIR8 Avg. embryo expression (dissected): '156.487'
Avg. embryo expression (LCM): '207.819'
AT1G30010 nMAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.35806 x 10-1 16 5 6 30 76.19% 83.33% 21 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057829'
Avg. expression score for this sample: '261.482'
Avg. expression score in LCM sample: '90.3481'
Tissue used: 'full endosperm'
AT1G30010 nMAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.8084 x 10-1 12 2 4 8 85.71% 66.67% 14 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057829'
Avg. expression score for this sample: '138.589'
Avg. expression score in LCM sample: '90.3481'
Tissue used: 'pure endosperm, no chalazal'
AT1G30010 nMAT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.90684 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30000 MNS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.8512 x 10-2 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30000 MNS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 0 2 40.00% 100.00% 5 2 TAIR8 Avg. embryo expression (dissected): '39.7238'
Avg. embryo expression (LCM): '40.2879'
AT1G30000 MNS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.5228 x 10-2 90 13 87.38% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30000 MNS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.94536 x 10-1 56 13 81.16% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30000 MNS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.40405 x 10-1 6 0 2 4 100.00% 66.67% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063372'
Avg. expression score for this sample: '67.4998'
Avg. expression score in LCM sample: '65.3763'
Tissue used: 'pure endosperm, no chalazal'
AT1G30000 MNS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.734 x 10-2 33 14 16 67 70.21% 80.72% 47 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063372'
Avg. expression score for this sample: '185.745'
Avg. expression score in LCM sample: '65.3763'
Tissue used: 'full endosperm'
AT1G29990 PFD6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.2419 x 10-2 110 39 75 191 73.83% 71.80% 149 266 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.026811'
Avg. expression score for this sample: '338.296'
Avg. expression score in LCM sample: '125.976'
Tissue used: 'full endosperm'
AT1G29990 PFD6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.92933 x 10-1 131 49 52 121 72.78% 69.94% 180 173 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.026811'
Avg. expression score for this sample: '344.568'
Avg. expression score in LCM sample: '125.976'
Tissue used: 'pure endosperm, no chalazal'
AT1G29990 PFD6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.57574 x 10-1 42 19 68.85% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29990 PFD6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-7 299 48 86.17% 347 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29990 PFD6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.11951 x 10-1 151 173 34 26 46.60% 43.33% 324 60 TAIR8 Avg. embryo expression (dissected): '429.354'
Avg. embryo expression (LCM): '516.007'
AT1G29990 PFD6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-14 384 41 90.35% 425 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 15 9 62.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.05652 x 10-1 13 7 65.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.95177 x 10-1 44 69 6 16 38.94% 72.73% 113 22 TAIR8 Avg. embryo expression (dissected): '390.573'
Avg. embryo expression (LCM): '368.167'
AT1G29980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.00105 x 10-1 4 12 1 9 25.00% 90.00% 16 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.381975'
Avg. expression score for this sample: '57.1075'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'pure endosperm, no chalazal'
AT1G29980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 9 17 32 64.00% 65.31% 25 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.381975'
Avg. expression score for this sample: '97.6208'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'full endosperm'
AT1G29980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29970 RPL18AA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.638 14 9 60.87% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29970 RPL18AA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 4 5 4 55.56% 44.44% 9 9 TAIR8 Avg. embryo expression (dissected): '107.504'
Avg. embryo expression (LCM): '57.2169'
AT1G29970 RPL18AA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0413 x 10-2 76 19 80.00% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29970 RPL18AA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.47 x 10-4 80 11 87.91% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29970 RPL18AA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 28 20 7 29 58.33% 80.56% 48 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '165.594'
Avg. expression score in LCM sample: '99.6225'
Tissue used: 'full endosperm'
AT1G29970 RPL18AA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 23 9 16 26 71.88% 61.90% 32 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '237.748'
Avg. expression score in LCM sample: '99.6225'
Tissue used: 'pure endosperm, no chalazal'
AT1G29965 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.44474 x 10-1 43 22 12 58 66.15% 82.86% 65 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057865'
Avg. expression score for this sample: '317.974'
Avg. expression score in LCM sample: '97.3443'
Tissue used: 'pure endosperm, no chalazal'
AT1G29965 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.82509 x 10-1 36 14 13 45 72.00% 77.59% 50 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057865'
Avg. expression score for this sample: '282.201'
Avg. expression score in LCM sample: '97.3443'
Tissue used: 'full endosperm'
AT1G29965 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.4373 x 10-2 24 18 57.14% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G29965 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.981 x 10-3 181 28 86.60% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'