Displaying data sets 15001 - 15100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G45300 BMY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.5671 1 0 4 1 100.00% 20.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.780788'
Avg. expression score for this sample: '29.5016'
Avg. expression score in LCM sample: '10.4061'
Tissue used: 'pure endosperm, no chalazal'
AT5G45300 BMY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 5 2 7 61.54% 77.78% 13 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.780788'
Avg. expression score for this sample: '51.8063'
Avg. expression score in LCM sample: '10.4061'
Tissue used: 'full endosperm'
AT5G45300 BMY2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 6 1 1 0 85.71% 0.00% 7 1 TAIR8 Avg. embryo expression (dissected): '44.1223'
Avg. embryo expression (LCM): '34.9882'
AT5G45300 BMY2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45300 BMY2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.80788 x 10-1 18 9 66.67% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45300 BMY2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.08354 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.8917 x 10-1 15 4 8 3 78.95% 27.27% 19 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731066'
Avg. expression score for this sample: '116.323'
Avg. expression score in LCM sample: '56.4106'
Tissue used: 'pure endosperm, no chalazal'
AT5G45290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.366 24 3 8 14 88.89% 63.64% 27 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731066'
Avg. expression score for this sample: '130.888'
Avg. expression score in LCM sample: '56.4106'
Tissue used: 'full endosperm'
AT5G45290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 6 1 1 50.00% 50.00% 12 2 TAIR8 Avg. embryo expression (dissected): '125.134'
Avg. embryo expression (LCM): '98.6099'
AT5G45290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.22725 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '1.04511'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.49482 x 10-1 3 2 6 3 60.00% 33.33% 5 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '3.06554'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.15524 x 10-1 28 10 7 2 73.68% 22.22% 38 9 TAIR8 Avg. embryo expression (dissected): '22.257'
Avg. embryo expression (LCM): '11.0641'
AT5G45280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2624 x 10-1 30 9 76.92% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45275 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 0 7 40.00% 100.00% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003857'
Avg. expression score for this sample: '32.6044'
Avg. expression score in LCM sample: '28.3082'
Tissue used: 'pure endosperm, no chalazal'
AT5G45275 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.011 x 10-3 6 6 3 59 50.00% 95.16% 12 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003857'
Avg. expression score for this sample: '53.9453'
Avg. expression score in LCM sample: '28.3082'
Tissue used: 'full endosperm'
AT5G45275 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 3 3 0 3 50.00% 100.00% 6 3 TAIR8 Avg. embryo expression (dissected): '23.8867'
Avg. embryo expression (LCM): '30.7308'
AT5G45275 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.20835 x 10-1 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45275 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7739 x 10-2 81 3 96.43% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45275 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45260 RRS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.29768 x 10-1 182 100 73 224 64.54% 75.42% 282 297 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-09'
Avg. expression score for this sample: '54.6642'
Avg. expression score in LCM sample: '14.9919'
Tissue used: 'pure endosperm, no chalazal'
AT5G45260 RRS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.9 x 10-11 389 94 160 546 80.54% 77.34% 483 706 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-09'
Avg. expression score for this sample: '83.0347'
Avg. expression score in LCM sample: '14.9919'
Tissue used: 'full endosperm'
AT5G45260 RRS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.84646 x 10-1 90 92 32 27 49.45% 45.76% 182 59 TAIR8 Avg. embryo expression (dissected): '37.9892'
Avg. embryo expression (LCM): '17.469'
AT5G45260 RRS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.13732 x 10-1 76 17 81.72% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45260 RRS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-13 1159 184 86.30% 1343 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45260 RRS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1169 103 91.90% 1272 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45250 RPS4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.04904 x 10-1 31 22 15 16 58.49% 51.61% 53 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.607571'
Avg. expression score for this sample: '27.7464'
Avg. expression score in LCM sample: '13.2869'
Tissue used: 'pure endosperm, no chalazal'
AT5G45250 RPS4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.24864 x 10-1 87 32 28 82 73.11% 74.55% 119 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.607571'
Avg. expression score for this sample: '52.9188'
Avg. expression score in LCM sample: '13.2869'
Tissue used: 'full endosperm'
AT5G45250 RPS4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 9 3 3 43.75% 50.00% 16 6 TAIR8 Avg. embryo expression (dissected): '15.0108'
Avg. embryo expression (LCM): '10.6748'
AT5G45250 RPS4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.42818 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45250 RPS4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.57269 x 10-1 41 12 77.36% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45250 RPS4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-7 72 3 96.00% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.429877'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.119523'
Avg. embryo expression (LCM): '.514902'
AT5G45240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.090585'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G45230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.316159'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.417317'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.455313'
Avg. embryo expression (LCM): '0'
AT5G45220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.932445'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 3 0 3 0.00% 100.00% 3 3 TAIR8 Avg. embryo expression (dissected): '4.31698'
Avg. embryo expression (LCM): '1.20562'
AT5G45210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003096'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 3.096 x 10-3 0 10 0 0 0.00% 10 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003096'
Avg. expression score for this sample: '1.14479'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G45200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.8402 x 10-2 511 202 207 431 71.67% 67.55% 713 638 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.5e-06'
Avg. expression score for this sample: '886.835'
Avg. expression score in LCM sample: '152.476'
Tissue used: 'pure endosperm, no chalazal'
AT5G45190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.4 x 10-6 869 240 339 713 78.36% 67.78% 1109 1052 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.5e-06'
Avg. expression score for this sample: '917.171'
Avg. expression score in LCM sample: '152.476'
Tissue used: 'full endosperm'
AT5G45190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2756 x 10-2 299 202 108 84 59.68% 43.75% 501 192 TAIR8 Avg. embryo expression (dissected): '761.07'
Avg. embryo expression (LCM): '430.119'
AT5G45190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.91233 x 10-1 95 34 73.64% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.24994 x 10-1 479 185 72.14% 664 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-23 774 115 87.06% 889 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.06664'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G45180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 2 100.00% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604715'
Avg. expression score for this sample: '18.3765'
Avg. expression score in LCM sample: '3.20415'
Tissue used: 'pure endosperm, no chalazal'
AT5G45170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.78716 x 10-1 7 1 7 15 87.50% 68.18% 8 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604715'
Avg. expression score for this sample: '30.4765'
Avg. expression score in LCM sample: '3.20415'
Tissue used: 'full endosperm'
AT5G45170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 5 1 1 0 83.33% 0.00% 6 1 TAIR8 Avg. embryo expression (dissected): '33.6476'
Avg. embryo expression (LCM): '27.3651'
AT5G45170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.52793 x 10-1 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4101 x 10-2 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45160 RL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.16698 x 10-1 10 7 9 7 58.82% 43.75% 17 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.72367'
Avg. expression score for this sample: '138.999'
Avg. expression score in LCM sample: '91.862'
Tissue used: 'pure endosperm, no chalazal'
AT5G45160 RL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 34 18 23 51 65.38% 68.92% 52 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.72367'
Avg. expression score for this sample: '313.32'
Avg. expression score in LCM sample: '91.862'
Tissue used: 'full endosperm'
AT5G45160 RL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.68097 x 10-1 26 19 7 9 57.78% 56.25% 45 16 TAIR8 Avg. embryo expression (dissected): '298.346'
Avg. embryo expression (LCM): '228.93'
AT5G45160 RL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.66852 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45160 RL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.64368 x 10-1 68 25 73.12% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45160 RL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2056 x 10-1 40 15 72.73% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45150 RTL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.129208'
Avg. expression score for this sample: '.180362'
Avg. expression score in LCM sample: '1.02885'
Tissue used: 'pure endosperm, no chalazal'
AT5G45150 RTL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.21473 x 10-1 2 10 3 6 16.67% 66.67% 12 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.129208'
Avg. expression score for this sample: '1.41345'
Avg. expression score in LCM sample: '1.02885'
Tissue used: 'full endosperm'
AT5G45150 RTL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.69631 x 10-1 10 4 0 2 71.43% 100.00% 14 2 TAIR8 Avg. embryo expression (dissected): '2.34287'
Avg. embryo expression (LCM): '3.50384'
AT5G45150 RTL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45150 RTL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.12976 x 10-1 16 14 53.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45150 RTL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-12 108 0 100.00% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45140 NRPC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.56233 x 10-1 59 23 31 28 71.95% 47.46% 82 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.347176'
Avg. expression score for this sample: '22.152'
Avg. expression score in LCM sample: '8.21614'
Tissue used: 'pure endosperm, no chalazal'
AT5G45140 NRPC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2567 x 10-2 65 13 27 71 83.33% 72.45% 78 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.347176'
Avg. expression score for this sample: '29.9682'
Avg. expression score in LCM sample: '8.21614'
Tissue used: 'full endosperm'
AT5G45140 NRPC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.09971 x 10-1 116 97 30 36 54.46% 54.55% 213 66 TAIR8 Avg. embryo expression (dissected): '70.5258'
Avg. embryo expression (LCM): '89.3166'
AT5G45140 NRPC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87494 x 10-1 25 8 75.76% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'