Displaying data sets 150701 - 150800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G30475 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '85.4083'
Avg. expression score in LCM sample: '13.9042'
Tissue used: 'pure endosperm, no chalazal'
AT1G30475 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30473 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30473 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.6556'
Avg. embryo expression (LCM): '36.1436'
AT1G30473 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '26.8891'
Avg. expression score in LCM sample: '11.5379'
Tissue used: 'pure endosperm, no chalazal'
AT1G30473 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30473 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30473 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.5123'
Avg. expression score in LCM sample: '11.5379'
Tissue used: 'full endosperm'
AT1G30470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.73375 x 10-1 28 15 19 56 65.12% 74.67% 43 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.344042'
Avg. expression score for this sample: '99.2737'
Avg. expression score in LCM sample: '41.2717'
Tissue used: 'full endosperm'
AT1G30470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3 x 10-5 106 11 90.60% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.55576 x 10-1 14 5 8 20 73.68% 71.43% 19 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.344042'
Avg. expression score for this sample: '44.8481'
Avg. expression score in LCM sample: '41.2717'
Tissue used: 'pure endosperm, no chalazal'
AT1G30470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.63444 x 10-1 79 41 65.83% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.44467 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 21 4 13 40.00% 76.47% 35 17 TAIR8 Avg. embryo expression (dissected): '64.3901'
Avg. embryo expression (LCM): '60.2184'
AT1G30460 CPSF30 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.95098 x 10-1 2 5 3 3 28.57% 50.00% 7 6 TAIR8 Avg. embryo expression (dissected): '727.583'
Avg. embryo expression (LCM): '420.21'
AT1G30460 CPSF30 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.7287 x 10-2 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30460 CPSF30 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.68 x 10-3 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30460 CPSF30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.43111 x 10-1 1 5 5 4 16.67% 44.44% 6 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340644'
Avg. expression score for this sample: '341.084'
Avg. expression score in LCM sample: '54.3382'
Tissue used: 'full endosperm'
AT1G30460 CPSF30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 3 100.00% 75.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340644'
Avg. expression score for this sample: '342.638'
Avg. expression score in LCM sample: '54.3382'
Tissue used: 'pure endosperm, no chalazal'
AT1G30460 CPSF30 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.93506 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30455 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.54545 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30455 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '3.25867'
Avg. embryo expression (LCM): '0'
AT1G30455 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 2 0 100.00% 0.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.07844'
Avg. expression score in LCM sample: '1.92543'
Tissue used: 'pure endosperm, no chalazal'
AT1G30455 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.33516 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30455 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54545 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30455 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 2 0 100.00% 0.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.81189'
Avg. expression score in LCM sample: '1.92543'
Tissue used: 'full endosperm'
AT1G30450 CCC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '82.8586'
Avg. expression score in LCM sample: '89.187'
Tissue used: 'full endosperm'
AT1G30450 CCC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30450 CCC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '56.9991'
Avg. expression score in LCM sample: '89.187'
Tissue used: 'pure endosperm, no chalazal'
AT1G30450 CCC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30450 CCC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30450 CCC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '75.5585'
Avg. embryo expression (LCM): '48.4635'
AT1G30440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.8999 x 10-2 18 39 1 3 31.58% 75.00% 57 4 TAIR8 Avg. embryo expression (dissected): '1013.99'
Avg. embryo expression (LCM): '430.282'
AT1G30440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.65838 x 10-1 37 11 77.08% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 17 6 73.91% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.19933 x 10-1 24 18 15 70 57.14% 82.35% 42 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.404585'
Avg. expression score for this sample: '357.291'
Avg. expression score in LCM sample: '67.8162'
Tissue used: 'full endosperm'
AT1G30440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.04933 x 10-1 6 10 4 15 37.50% 78.95% 16 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.404585'
Avg. expression score for this sample: '283.508'
Avg. expression score in LCM sample: '67.8162'
Tissue used: 'pure endosperm, no chalazal'
AT1G30440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G30430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G30430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G30420 ABCC11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 1 3 4 85.71% 57.14% 7 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766128'
Avg. expression score for this sample: '9.85676'
Avg. expression score in LCM sample: '5.27655'
Tissue used: 'full endosperm'
AT1G30420 ABCC11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-5 73 3 96.05% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30420 ABCC11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6985 x 10-1 2 0 6 2 100.00% 25.00% 2 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766128'
Avg. expression score for this sample: '7.18998'
Avg. expression score in LCM sample: '5.27655'
Tissue used: 'pure endosperm, no chalazal'
AT1G30420 ABCC11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.73287 x 10-1 16 9 64.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30420 ABCC11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.44 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30420 ABCC11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 6 0 2 0 100.00% 0.00% 6 2 TAIR8 Avg. embryo expression (dissected): '11.3049'
Avg. embryo expression (LCM): '8.16308'
AT1G30410 ABCC12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.70223 x 10-1 9 19 8 6 32.14% 42.86% 28 14 TAIR8 Avg. embryo expression (dissected): '47.894'
Avg. embryo expression (LCM): '51.1385'
AT1G30410 ABCC12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.42051 x 10-1 27 7 79.41% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30410 ABCC12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.62252 x 10-1 37 18 67.27% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30410 ABCC12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.55041 x 10-1 20 8 10 30 71.43% 75.00% 28 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '29.8679'
Avg. expression score in LCM sample: '18.1078'
Tissue used: 'full endosperm'
AT1G30410 ABCC12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.49612 x 10-1 6 14 5 14 30.00% 73.68% 20 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.0544'
Avg. expression score in LCM sample: '18.1078'
Tissue used: 'pure endosperm, no chalazal'
AT1G30410 ABCC12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30400 ABCC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30400 ABCC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '194.933'
Avg. embryo expression (LCM): '156.857'
AT1G30400 ABCC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '184.858'
Avg. expression score in LCM sample: '158.135'
Tissue used: 'pure endosperm, no chalazal'
AT1G30400 ABCC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30400 ABCC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30400 ABCC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '364.029'
Avg. expression score in LCM sample: '158.135'
Tissue used: 'full endosperm'
AT1G30380 PSAK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '645.519'
Avg. expression score in LCM sample: '279.496'
Tissue used: 'full endosperm'
AT1G30380 PSAK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30380 PSAK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1652.07'
Avg. expression score in LCM sample: '279.496'
Tissue used: 'pure endosperm, no chalazal'
AT1G30380 PSAK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30380 PSAK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30380 PSAK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3577.62'
Avg. embryo expression (LCM): '956.926'
AT1G30370 DLAH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.74744'
Avg. embryo expression (LCM): '1.58238'
AT1G30370 DLAH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30370 DLAH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30370 DLAH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.27468'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G30370 DLAH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.29867'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G30370 DLAH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30360 ERD4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5 x 10-6 0 23 0.00% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30360 ERD4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4614 x 10-2 18 0 4 0 100.00% 0.00% 18 4 TAIR8 Avg. embryo expression (dissected): '326.981'
Avg. embryo expression (LCM): '287.579'
AT1G30360 ERD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.1 x 10-6 60 0 89 0 100.00% 0.00% 60 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.8e-09'
Avg. expression score for this sample: '1242.65'
Avg. expression score in LCM sample: '579.642'
Tissue used: 'pure endosperm, no chalazal'
AT1G30360 ERD4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.60976 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30360 ERD4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30360 ERD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.9 x 10-5 128 0 132 0 100.00% 0.00% 128 132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.8e-09'
Avg. expression score for this sample: '673.275'
Avg. expression score in LCM sample: '579.642'
Tissue used: 'full endosperm'
AT1G30350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.445635'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G30350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.31573'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G30350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G30330 ARF6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.82792 x 10-1 122 173 98 105 41.36% 51.72% 295 203 TAIR8 Avg. embryo expression (dissected): '370.609'
Avg. embryo expression (LCM): '149.573'
AT1G30330 ARF6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.47506 x 10-1 5 5 50.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30330 ARF6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.612 x 10-2 20 27 42.55% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30330 ARF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.95172 x 10-1 28 29 11 27 49.12% 71.05% 57 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.05526'
Avg. expression score for this sample: '38.0593'
Avg. expression score in LCM sample: '7.62822'
Tissue used: 'full endosperm'
AT1G30330 ARF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7074 x 10-1 19 37 21 60 33.93% 74.07% 56 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.05526'
Avg. expression score for this sample: '49.5906'
Avg. expression score in LCM sample: '7.62822'
Tissue used: 'pure endosperm, no chalazal'
AT1G30330 ARF6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.37982 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 19 3 7 44.12% 70.00% 34 10 TAIR8 Avg. embryo expression (dissected): '58.2744'
Avg. embryo expression (LCM): '61.0472'
AT1G30320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.47547 x 10-1 77 39 20 78 66.38% 79.59% 116 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.509214'
Avg. expression score for this sample: '165.266'
Avg. expression score in LCM sample: '64.6414'
Tissue used: 'pure endosperm, no chalazal'
AT1G30320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.17 x 10-4 77 10 88.51% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-6 39 0 100.00% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G30320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.18346 x 10-1 27 38 35 112 41.54% 76.19% 65 147 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.509214'
Avg. expression score for this sample: '114.731'
Avg. expression score in LCM sample: '64.6414'
Tissue used: 'full endosperm'
AT1G30300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.1999'
Avg. expression score in LCM sample: '11.8906'
Tissue used: 'full endosperm'
AT1G30300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.14286 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'