Displaying data sets 150201 - 150300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G31240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.115'
Avg. expression score in LCM sample: '12.3609'
Tissue used: 'pure endosperm, no chalazal'
AT1G31240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.55 33 14 70.21% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '10.6863'
Avg. embryo expression (LCM): '19.9556'
AT1G31230 AK-HSDH I embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 194 195 43 45 49.87% 51.14% 389 88 TAIR8 Avg. embryo expression (dissected): '159.479'
Avg. embryo expression (LCM): '105.718'
AT1G31230 AK-HSDH I endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.295 x 10-3 130 31 80.75% 161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31230 AK-HSDH I endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1 x 10-20 453 49 90.24% 502 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31230 AK-HSDH I endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-16 388 45 89.61% 433 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31230 AK-HSDH I endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.191 x 10-3 279 123 142 429 69.40% 75.13% 402 571 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012887'
Avg. expression score for this sample: '119.83'
Avg. expression score in LCM sample: '31.1743'
Tissue used: 'full endosperm'
AT1G31230 AK-HSDH I endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.84884 x 10-1 139 73 68 151 65.57% 68.95% 212 219 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012887'
Avg. expression score for this sample: '87.3973'
Avg. expression score in LCM sample: '31.1743'
Tissue used: 'pure endosperm, no chalazal'
AT1G31220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 181 107 81 199 62.85% 71.07% 288 280 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054419'
Avg. expression score for this sample: '101.259'
Avg. expression score in LCM sample: '53.1183'
Tissue used: 'pure endosperm, no chalazal'
AT1G31220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.85593 x 10-1 935 389 70.62% 1324 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.36121 x 10-1 221 237 87 89 48.25% 50.57% 458 176 TAIR8 Avg. embryo expression (dissected): '175.639'
Avg. embryo expression (LCM): '145.077'
AT1G31220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.34262 x 10-1 83 28 74.77% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8505 x 10-2 322 110 191 432 74.54% 69.34% 432 623 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054419'
Avg. expression score for this sample: '140.582'
Avg. expression score in LCM sample: '53.1183'
Tissue used: 'full endosperm'
AT1G31220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.4 x 10-6 906 264 77.44% 1170 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31200 PP2-A9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.16667 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31200 PP2-A9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 3 50.00% 100.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.15146'
Avg. expression score in LCM sample: '16.3294'
Tissue used: 'full endosperm'
AT1G31200 PP2-A9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.28385'
Avg. expression score in LCM sample: '16.3294'
Tissue used: 'pure endosperm, no chalazal'
AT1G31200 PP2-A9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31200 PP2-A9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.16667 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31200 PP2-A9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 3 0 0 40.00% 5 0 TAIR8 Avg. embryo expression (dissected): '16.198'
Avg. embryo expression (LCM): '13.9526'
AT1G31190 IMPL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.62554 x 10-1 9 12 1 0 42.86% 0.00% 21 1 TAIR8 Avg. embryo expression (dissected): '185.403'
Avg. embryo expression (LCM): '133.535'
AT1G31190 IMPL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6557 x 10-2 20 2 90.91% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31190 IMPL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.864 x 10-3 86 17 83.50% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31190 IMPL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.30764 x 10-1 31 27 27 89 53.45% 76.72% 58 116 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.828743'
Avg. expression score for this sample: '126.029'
Avg. expression score in LCM sample: '32.1443'
Tissue used: 'full endosperm'
AT1G31190 IMPL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9444 x 10-2 66 17 79.52% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31190 IMPL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 6 2 8 40.00% 80.00% 10 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.828743'
Avg. expression score for this sample: '117.25'
Avg. expression score in LCM sample: '32.1443'
Tissue used: 'pure endosperm, no chalazal'
AT1G31180 IMD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '35.7076'
Avg. expression score in LCM sample: '13.0517'
Tissue used: 'pure endosperm, no chalazal'
AT1G31180 IMD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31180 IMD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '100.398'
Avg. embryo expression (LCM): '156.053'
AT1G31180 IMD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31180 IMD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31180 IMD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '49.3284'
Avg. expression score in LCM sample: '13.0517'
Tissue used: 'full endosperm'
AT1G31175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.067 x 10-3 73 18 28 108 80.22% 79.41% 91 136 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015751'
Avg. expression score for this sample: '64.1247'
Avg. expression score in LCM sample: '35.4367'
Tissue used: 'full endosperm'
AT1G31175 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.4 x 10-16 253 7 97.31% 260 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 39 12 29 43 76.47% 59.72% 51 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015751'
Avg. expression score for this sample: '53.0073'
Avg. expression score in LCM sample: '35.4367'
Tissue used: 'pure endosperm, no chalazal'
AT1G31175 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.5282 x 10-2 28 3 90.32% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31175 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.13052 x 10-1 127 40 76.05% 167 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31175 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.04677 x 10-1 27 16 7 12 62.79% 63.16% 43 19 TAIR8 Avg. embryo expression (dissected): '49.3131'
Avg. embryo expression (LCM): '32.803'
AT1G31173 MIR167D embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.464112'
Avg. embryo expression (LCM): '.778632'
AT1G31173 MIR167D endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31173 MIR167D endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31173 MIR167D endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31173 MIR167D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G31173 MIR167D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G31170 SRX endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '126.955'
Avg. expression score in LCM sample: '90.2893'
Tissue used: 'pure endosperm, no chalazal'
AT1G31170 SRX endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31170 SRX embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '83.4747'
Avg. embryo expression (LCM): '75.0124'
AT1G31170 SRX endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31170 SRX endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '256.837'
Avg. expression score in LCM sample: '90.2893'
Tissue used: 'full endosperm'
AT1G31170 SRX endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31163 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31163 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.607428'
Avg. expression score in LCM sample: '2.57214'
Tissue used: 'full endosperm'
AT1G31163 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.25889'
Avg. expression score in LCM sample: '2.57214'
Tissue used: 'pure endosperm, no chalazal'
AT1G31163 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31163 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31163 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G31160 HINT 2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6701 x 10-2 22 0 4 0 100.00% 0.00% 22 4 TAIR8 Avg. embryo expression (dissected): '22.9432'
Avg. embryo expression (LCM): '21.2114'
AT1G31160 HINT 2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.45493 x 10-1 0 5 0.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31160 HINT 2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.71429 x 10-1 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31160 HINT 2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.53647 x 10-1 11 0 14 0 100.00% 0.00% 11 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.018966'
Avg. expression score for this sample: '14.6948'
Avg. expression score in LCM sample: '10.6413'
Tissue used: 'full endosperm'
AT1G31160 HINT 2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-5 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31160 HINT 2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.9756 x 10-2 11 0 17 0 100.00% 0.00% 11 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.018966'
Avg. expression score for this sample: '18.7162'
Avg. expression score in LCM sample: '10.6413'
Tissue used: 'pure endosperm, no chalazal'
AT1G31150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 2 2 4 3 50.00% 42.86% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.879627'
Avg. expression score for this sample: '129.801'
Avg. expression score in LCM sample: '50.9136'
Tissue used: 'pure endosperm, no chalazal'
AT1G31150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.64299 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 5 4 0 68.75% 0.00% 16 4 TAIR8 Avg. embryo expression (dissected): '227.667'
Avg. embryo expression (LCM): '112.186'
AT1G31150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.57 x 10-4 26 1 96.30% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 27 9 19 31 75.00% 62.00% 36 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.879627'
Avg. expression score for this sample: '138.377'
Avg. expression score in LCM sample: '50.9136'
Tissue used: 'full endosperm'
AT1G31140 GOA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.229896'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G31140 GOA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31140 GOA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G31140 GOA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31140 GOA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31140 GOA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.945918'
Avg. embryo expression (LCM): '0'
AT1G31130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1362.05'
Avg. embryo expression (LCM): '241.25'
AT1G31130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3567.89'
Avg. expression score in LCM sample: '605.04'
Tissue used: 'full endosperm'
AT1G31130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1405.4'
Avg. expression score in LCM sample: '605.04'
Tissue used: 'pure endosperm, no chalazal'
AT1G31120 KUP10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.83619 x 10-1 143 95 73 171 60.08% 70.08% 238 244 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.658765'
Avg. expression score for this sample: '126.25'
Avg. expression score in LCM sample: '26.2064'
Tissue used: 'pure endosperm, no chalazal'
AT1G31120 KUP10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-7 184 32 85.19% 216 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31120 KUP10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.3509 x 10-1 109 153 46 56 41.60% 54.90% 262 102 TAIR8 Avg. embryo expression (dissected): '139.454'
Avg. embryo expression (LCM): '87.3826'
AT1G31120 KUP10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.8973 x 10-1 30 10 75.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31120 KUP10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.55748 x 10-1 151 62 74 173 70.89% 70.04% 213 247 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.658765'
Avg. expression score for this sample: '77.9034'
Avg. expression score in LCM sample: '26.2064'
Tissue used: 'full endosperm'
AT1G31120 KUP10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.7 x 10-15 347 50 87.41% 397 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G31110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G31110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G31090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '1.41871'
Avg. embryo expression (LCM): '0'
AT1G31090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9 x 10-5 249 21 92.22% 270 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.34614 x 10-1 0 0 2 16 88.89% 0 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.768'
Avg. expression score in LCM sample: '55.0731'
Tissue used: 'full endosperm'
AT1G31090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-4 1 14 6.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.3783 x 10-2 0 7 3 6 0.00% 66.67% 7 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.5339'
Avg. expression score in LCM sample: '55.0731'
Tissue used: 'pure endosperm, no chalazal'