GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G144166	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.81243 x 10^-2	171	55	110	179	75.66%	61.94%	226	289	RefGen V2	χ2 p-value for B73 x Mo17: '.0041159' χ2 p-value for Mo17 x B73: '.0881243' Biased in favor of strain: ''
GRMZM2G144166	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.01 x 10^-8	310	180	230	128	63.27%	35.75%	490	358	RefGen V2	χ2 p-value for B73 x Mo17: '4.28e-09' χ2 p-value for Mo17 x B73: '7.01e-08' Biased in favor of strain: 'B73'
GRMZM2G144155	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.437682 x 10^-1	115	148	101	100	43.73%	49.75%	263	201	RefGen V2	χ2 p-value for B73 x Mo17: '.0418642' χ2 p-value for Mo17 x B73: '.9437682' Biased in favor of strain: ''
GRMZM2G144155	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.76 x 10^-6	32	47	21	121	40.51%	85.21%	79	142	RefGen V2	χ2 p-value for B73 x Mo17: '8.12e-07' χ2 p-value for Mo17 x B73: '2.76e-06' Biased in favor of strain: 'Mo17'
GRMZM2G144153	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5 x 10^-12	283	51	229	110	84.73%	32.45%	334	339	RefGen V2	χ2 p-value for B73 x Mo17: '2.50e-12' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G144153	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.36 x 10^-16	222	30	207	72	88.10%	25.81%	252	279	RefGen V2	χ2 p-value for B73 x Mo17: '1.12e-33' χ2 p-value for Mo17 x B73: '6.36e-16' Biased in favor of strain: 'B73'
GRMZM2G144146	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.23 x 10^-24	1693	1003	1534	1023	62.80%	40.01%	2696	2557	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.23e-24' Biased in favor of strain: 'B73'
GRMZM2G144146	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.46 x 10^-7	1505	570	665	1033	72.53%	60.84%	2075	1698	RefGen V2	χ2 p-value for B73 x Mo17: '1.46e-08' χ2 p-value for Mo17 x B73: '3.46e-07' Biased in favor of strain: 'B73'
GRMZM2G144142	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.236738 x 10^-1	20	5	11	25	80.00%	69.44%	25	36	RefGen V2	χ2 p-value for B73 x Mo17: '.1573048' χ2 p-value for Mo17 x B73: '.7236738' Biased in favor of strain: ''
GRMZM2G144142	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.50477 x 10^-2	55	23	43	28	70.51%	39.44%	78	71	RefGen V2	χ2 p-value for B73 x Mo17: '.0002909' χ2 p-value for Mo17 x B73: '.0750477' Biased in favor of strain: ''
GRMZM2G144109	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	125	100	82	82	55.56%	50.00%	225	164	RefGen V2	χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G144109	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.43429 x 10^-1	14	5	6	15	73.68%	71.43%	19	21	RefGen V2	χ2 p-value for B73 x Mo17: '.5164242' χ2 p-value for Mo17 x B73: '.643429' Biased in favor of strain: ''
GRMZM2G144101	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3316	632	1664	1188	83.99%	41.65%	3948	2852	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G144101	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2979	1411	2325	1502	67.86%	39.25%	4390	3827	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G144097	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.301393 x 10^-1	75	46	56	44	61.98%	44.00%	121	100	RefGen V2	χ2 p-value for B73 x Mo17: '.00838' χ2 p-value for Mo17 x B73: '.2301393' Biased in favor of strain: ''
GRMZM2G144097	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.586872 x 10^-1	18	2	15	26	90.00%	63.41%	20	41	RefGen V2	χ2 p-value for B73 x Mo17: '.0268576' χ2 p-value for Mo17 x B73: '.6586872' Biased in favor of strain: ''
GRMZM2G144088	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.55 x 10^-5	441	140	171	221	75.90%	56.38%	581	392	RefGen V2	χ2 p-value for B73 x Mo17: '2.32e-06' χ2 p-value for Mo17 x B73: '.0000155' Biased in favor of strain: 'B73'
GRMZM2G144088	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.410723 x 10^-1	365	367	321	369	49.86%	53.48%	732	690	RefGen V2	χ2 p-value for B73 x Mo17: '.9410723' χ2 p-value for Mo17 x B73: '.0676504' Biased in favor of strain: ''
GRMZM2G144083	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.330289 x 10^-1	96	37	46	44	72.18%	48.89%	133	90	RefGen V2	χ2 p-value for B73 x Mo17: '3.12e-07' χ2 p-value for Mo17 x B73: '.8330289' Biased in favor of strain: ''
GRMZM2G144083	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	6.27 x 10^-5	1071	653	843	819	62.12%	49.28%	1724	1662	RefGen V2	χ2 p-value for B73 x Mo17: '.0000627' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G144071	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.795003 x 10^-1	10	2	10	26	83.33%	72.22%	12	36	RefGen V2	χ2 p-value for B73 x Mo17: '.220676' χ2 p-value for Mo17 x B73: '.4795003' Biased in favor of strain: ''
GRMZM2G144071	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.840857 x 10^-1	94	51	78	73	64.83%	48.34%	145	151	RefGen V2	χ2 p-value for B73 x Mo17: '.0003557' χ2 p-value for Mo17 x B73: '.6840857' Biased in favor of strain: ''
GRMZM2G144044	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	2	2	0.00%	50.00%	1	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G144044	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G144042	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	0.0	584	736	783	576	44.24%	42.38%	1320	1359	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G144042	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.544542 x 10^-1	181	187	170	122	49.18%	41.78%	368	292	RefGen V2	χ2 p-value for B73 x Mo17: '.7544542' χ2 p-value for Mo17 x B73: '.0049698' Biased in favor of strain: ''
GRMZM2G144030	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	1	66.67%	50.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G144030	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	1	100.00%	50.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G144020	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.25 x 10^-10	212	37	103	74	85.14%	41.81%	249	177	RefGen V2	χ2 p-value for B73 x Mo17: '6.25e-10' χ2 p-value for Mo17 x B73: '2.29e-12' Biased in favor of strain: 'B73'
GRMZM2G144020	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.06 x 10^-8	164	72	140	62	69.49%	30.69%	236	202	RefGen V2	χ2 p-value for B73 x Mo17: '2.12e-09' χ2 p-value for Mo17 x B73: '4.06e-08' Biased in favor of strain: 'B73'
GRMZM2G144008	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.58 x 10^-5	187	114	206	111	62.13%	35.02%	301	317	RefGen V2	χ2 p-value for B73 x Mo17: '.0000258' χ2 p-value for Mo17 x B73: '9.52e-08' Biased in favor of strain: 'B73'
GRMZM2G144008	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.55 x 10^-6	201	50	134	107	80.08%	44.40%	251	241	RefGen V2	χ2 p-value for B73 x Mo17: '6.55e-06' χ2 p-value for Mo17 x B73: '2.24e-13' Biased in favor of strain: 'B73'
GRMZM2G144002	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.53508 x 10^-2	120	40	73	102	75.00%	58.29%	160	175	RefGen V2	χ2 p-value for B73 x Mo17: '.0253508' χ2 p-value for Mo17 x B73: '.0186778' Biased in favor of strain: ''
GRMZM2G144002	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.086006 x 10^-1	105	83	153	110	55.85%	41.83%	188	263	RefGen V2	χ2 p-value for B73 x Mo17: '.1086006' χ2 p-value for Mo17 x B73: '.0080137' Biased in favor of strain: ''
GRMZM2G143998	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	2	0.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G143998	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G143955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21949 x 10^-2	155	52	78	46	74.88%	37.10%	207	124	RefGen V2	χ2 p-value for B73 x Mo17: '.0121949' χ2 p-value for Mo17 x B73: '2.85e-12' Biased in favor of strain: ''
GRMZM2G143955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1010	283	783	221	78.11%	22.01%	1293	1004	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143917	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.389825 x 10^-1	34	15	23	14	69.39%	37.84%	49	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0066419' χ2 p-value for Mo17 x B73: '.1389825' Biased in favor of strain: ''
GRMZM2G143917	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.892678 x 10^-1	13	13	10	18	50.00%	64.29%	26	28	RefGen V2	χ2 p-value for B73 x Mo17: '.0714187' χ2 p-value for Mo17 x B73: '.7892678' Biased in favor of strain: ''
GRMZM2G143883	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.462162 x 10^-1	159	73	74	113	68.53%	60.43%	232	187	RefGen V2	χ2 p-value for B73 x Mo17: '.5462162' χ2 p-value for Mo17 x B73: '.0703256' Biased in favor of strain: ''
GRMZM2G143883	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.814974 x 10^-1	28	14	23	22	66.67%	48.89%	42	45	RefGen V2	χ2 p-value for B73 x Mo17: '.0307536' χ2 p-value for Mo17 x B73: '.8814974' Biased in favor of strain: ''
GRMZM2G143878	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.600471 x 10^-1	56	50	43	49	52.83%	53.26%	106	92	RefGen V2	χ2 p-value for B73 x Mo17: '.5600471' χ2 p-value for Mo17 x B73: '.5316146' Biased in favor of strain: ''
GRMZM2G143878	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999995 x 10^-1	64	46	41	82	58.18%	66.67%	110	123	RefGen V2	χ2 p-value for B73 x Mo17: '.0590507' χ2 p-value for Mo17 x B73: '.9999995' Biased in favor of strain: ''
GRMZM2G143862	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	5	2	75.00%	28.57%	4	7	RefGen V2	χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: ''
GRMZM2G143862	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	4	1	100.00%	20.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G143858	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.08054 x 10^-2	176	87	115	86	66.92%	42.79%	263	201	RefGen V2	χ2 p-value for B73 x Mo17: '4.07e-08' χ2 p-value for Mo17 x B73: '.0408054' Biased in favor of strain: 'B73'
GRMZM2G143858	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.662981 x 10^-1	27	11	35	52	71.05%	59.77%	38	87	RefGen V2	χ2 p-value for B73 x Mo17: '.5662981' χ2 p-value for Mo17 x B73: '.1723861' Biased in favor of strain: ''
GRMZM2G143854	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G143854	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	4	6	1	20.00%	14.29%	5	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G143817	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.21679 x 10^-2	32	14	29	14	69.57%	32.56%	46	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0079554' χ2 p-value for Mo17 x B73: '.0221679' Biased in favor of strain: 'B73'
GRMZM2G143817	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5 x 10^-5	53	4	38	4	92.98%	9.52%	57	42	RefGen V2	χ2 p-value for B73 x Mo17: '.000025' χ2 p-value for Mo17 x B73: '3.97e-15' Biased in favor of strain: 'B73'
GRMZM2G143791	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.543287 x 10^-1	378	200	180	354	65.40%	66.29%	578	534	RefGen V2	χ2 p-value for B73 x Mo17: '.5175188' χ2 p-value for Mo17 x B73: '.8543287' Biased in favor of strain: ''
GRMZM2G143791	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.44 x 10^-9	8709	7956	7612	6896	52.26%	47.53%	16665	14508	RefGen V2	χ2 p-value for B73 x Mo17: '5.44e-09' χ2 p-value for Mo17 x B73: '2.77e-09' Biased in favor of strain: 'B73'
GRMZM2G143788	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	865	412	724	315	67.74%	30.32%	1277	1039	RefGen V2	χ2 p-value for B73 x Mo17: '7.97e-37' χ2 p-value for Mo17 x B73: '6.84e-37' Biased in favor of strain: 'B73'
GRMZM2G143788	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2445	459	1155	844	84.19%	42.22%	2904	1999	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143782	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2074	44	957	39	97.92%	3.92%	2118	996	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143782	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1492	86	1380	92	94.55%	6.25%	1578	1472	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143780	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	14	3	4	12.50%	57.14%	16	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: ''
GRMZM2G143780	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	4	100.00%	100.00%	1	4	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G143767	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5067	1318	2360	2142	79.36%	47.58%	6385	4502	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143767	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1765	787	1535	847	69.16%	35.56%	2552	2382	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143765	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.061165 x 10^-1	39	32	63	45	54.93%	41.67%	71	108	RefGen V2	χ2 p-value for B73 x Mo17: '.4061165' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G143765	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	8.6216 x 10^-3	75	59	80	81	55.97%	50.31%	134	161	RefGen V2	χ2 p-value for B73 x Mo17: '.0086216' χ2 p-value for Mo17 x B73: '.0000107' Biased in favor of strain: ''
GRMZM2G143747	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G143747	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.022 x 10^-3	8	36	8	26	18.18%	76.47%	44	34	RefGen V2	χ2 p-value for B73 x Mo17: '.0000243' χ2 p-value for Mo17 x B73: '.002022' Biased in favor of strain: 'Mo17'
GRMZM2G143725	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1509	687	1289	657	68.72%	33.76%	2196	1946	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143725	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2302	559	1245	1184	80.46%	48.74%	2861	2429	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143723	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0547 x 10^-3	1	15	0	19	6.25%	100.00%	16	19	RefGen V2	χ2 p-value for B73 x Mo17: '2.95e-07' χ2 p-value for Mo17 x B73: '.0020547' Biased in favor of strain: 'Mo17'
GRMZM2G143723	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.07 x 10^-22	446	141	393	162	75.98%	29.19%	587	555	RefGen V2	χ2 p-value for B73 x Mo17: '2.44e-36' χ2 p-value for Mo17 x B73: '1.07e-22' Biased in favor of strain: 'B73'
GRMZM2G143718	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.86 x 10^-7	197	110	229	134	64.17%	36.91%	307	363	RefGen V2	χ2 p-value for B73 x Mo17: '6.86e-07' χ2 p-value for Mo17 x B73: '6.16e-07' Biased in favor of strain: 'B73'
GRMZM2G143718	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.041625 x 10^-1	23	20	15	17	53.49%	53.12%	43	32	RefGen V2	χ2 p-value for B73 x Mo17: '.0667737' χ2 p-value for Mo17 x B73: '.1041625' Biased in favor of strain: ''
GRMZM2G143714	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.31 x 10^-5	526	504	378	958	51.07%	71.71%	1030	1336	RefGen V2	χ2 p-value for B73 x Mo17: '2.41e-26' χ2 p-value for Mo17 x B73: '.0000931' Biased in favor of strain: 'Mo17'
GRMZM2G143714	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.518284 x 10^-1	373	348	323	265	51.73%	45.07%	721	588	RefGen V2	χ2 p-value for B73 x Mo17: '.3518284' χ2 p-value for Mo17 x B73: '.0167623' Biased in favor of strain: ''
GRMZM2G143703	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.40493 x 10^-2	315	264	240	338	54.40%	58.48%	579	578	RefGen V2	χ2 p-value for B73 x Mo17: '.0340493' χ2 p-value for Mo17 x B73: '.0000458' Biased in favor of strain: ''
GRMZM2G143703	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.819358 x 10^-1	236	146	163	286	61.78%	63.70%	382	449	RefGen V2	χ2 p-value for B73 x Mo17: '.0427537' χ2 p-value for Mo17 x B73: '.1819358' Biased in favor of strain: ''
GRMZM2G143655	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.25274 x 10^-1	183	101	116	144	64.44%	55.38%	284	260	RefGen V2	χ2 p-value for B73 x Mo17: '.425274' χ2 p-value for Mo17 x B73: '.0001138' Biased in favor of strain: ''
GRMZM2G143655	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.20383 x 10^-2	138	98	101	77	58.47%	43.26%	236	178	RefGen V2	χ2 p-value for B73 x Mo17: '.0092202' χ2 p-value for Mo17 x B73: '.0720383' Biased in favor of strain: ''
GRMZM2G143651	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4149	1501	4062	1555	73.43%	27.68%	5650	5617	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143651	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4284	1100	2641	2414	79.57%	47.75%	5384	5055	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143646	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.32 x 10^-22	448	67	312	172	86.99%	35.54%	515	484	RefGen V2	χ2 p-value for B73 x Mo17: '1.32e-22' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143646	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.83 x 10^-15	478	200	458	249	70.50%	35.22%	678	707	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-26' χ2 p-value for Mo17 x B73: '3.83e-15' Biased in favor of strain: 'B73'
GRMZM2G143640	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.6 x 10^-9	260	143	160	56	64.52%	25.93%	403	216	RefGen V2	χ2 p-value for B73 x Mo17: '5.60e-09' χ2 p-value for Mo17 x B73: '1.48e-12' Biased in favor of strain: 'B73'
GRMZM2G143640	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.63517 x 10^-2	16	1	15	12	94.12%	44.44%	17	27	RefGen V2	χ2 p-value for B73 x Mo17: '.0163517' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G143627	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.17 x 10^-15	1671	570	1214	1233	74.56%	50.39%	2241	2447	RefGen V2	χ2 p-value for B73 x Mo17: '2.17e-15' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G143627	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.69728 x 10^-2	1953	1555	1344	1238	55.67%	47.95%	3508	2582	RefGen V2	χ2 p-value for B73 x Mo17: '1.82e-11' χ2 p-value for Mo17 x B73: '.0369728' Biased in favor of strain: 'B73'
GRMZM2G143625	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.70067 x 10^-1	13	21	14	32	38.24%	69.57%	34	46	RefGen V2	χ2 p-value for B73 x Mo17: '.170067' χ2 p-value for Mo17 x B73: '.0079554' Biased in favor of strain: ''
GRMZM2G143625	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.572993 x 10^-1	9	10	5	20	47.37%	80.00%	19	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0743486' χ2 p-value for Mo17 x B73: '.1572993' Biased in favor of strain: ''
GRMZM2G143613	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	4	14	87.50%	77.78%	8	18	RefGen V2	χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.3173106' Biased in favor of strain: ''
GRMZM2G143613	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	4	6	0	55.56%	0.00%	9	6	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G143608	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.850494 x 10^-1	9	5	13	7	64.29%	35.00%	14	20	RefGen V2	χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G143608	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.386 x 10^-4	2	14	0	27	12.50%	100.00%	16	27	RefGen V2	χ2 p-value for B73 x Mo17: '4.30e-06' χ2 p-value for Mo17 x B73: '.0002386' Biased in favor of strain: 'Mo17'
GRMZM2G143602	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	5	3	0.00%	37.50%	4	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: ''
GRMZM2G143602	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.053805 x 10^-1	8	5	2	11	61.54%	84.62%	13	13	RefGen V2	χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.0125549' Biased in favor of strain: ''
GRMZM2G143590	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.650303 x 10^-1	84	48	43	35	63.64%	44.87%	132	78	RefGen V2	χ2 p-value for B73 x Mo17: '.001728' χ2 p-value for Mo17 x B73: '.3650303' Biased in favor of strain: ''
GRMZM2G143590	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.223527 x 10^-1	43	29	36	65	59.72%	64.36%	72	101	RefGen V2	χ2 p-value for B73 x Mo17: '.2112833' χ2 p-value for Mo17 x B73: '.6223527' Biased in favor of strain: ''
GRMZM2G143535	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.92 x 10^-7	123	0	24	7	100.00%	22.58%	123	31	RefGen V2	χ2 p-value for B73 x Mo17: '4.43e-15' χ2 p-value for Mo17 x B73: '1.92e-07' Biased in favor of strain: 'B73'
GRMZM2G143535	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.72 x 10^-6	41	7	38	8	85.42%	17.39%	48	46	RefGen V2	χ2 p-value for B73 x Mo17: '9.23e-07' χ2 p-value for Mo17 x B73: '9.72e-06' Biased in favor of strain: 'B73'
GRMZM2G143525	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.780884 x 10^-1	86	84	55	82	50.59%	59.85%	170	137	RefGen V2	χ2 p-value for B73 x Mo17: '.8780884' χ2 p-value for Mo17 x B73: '.0210679' Biased in favor of strain: ''
GRMZM2G143525	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.28918 x 10^-2	40	32	42	60	55.56%	58.82%	72	102	RefGen V2	χ2 p-value for B73 x Mo17: '.0454952' χ2 p-value for Mo17 x B73: '.0928918' Biased in favor of strain: ''

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