Displaying data sets 14901 - 15000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G45450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.893296'
Avg. embryo expression (LCM): '1.93402'
AT5G45450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.71261 x 10-1 6 8 2 27 42.86% 93.10% 14 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001909'
Avg. expression score for this sample: '13.0856'
Avg. expression score in LCM sample: '11.7877'
Tissue used: 'pure endosperm, no chalazal'
AT5G45440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.313 x 10-3 53 13 8 55 80.30% 87.30% 66 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001909'
Avg. expression score for this sample: '30.7137'
Avg. expression score in LCM sample: '11.7877'
Tissue used: 'full endosperm'
AT5G45440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.18245 x 10-1 7 13 4 3 35.00% 42.86% 20 7 TAIR8 Avg. embryo expression (dissected): '11.5275'
Avg. embryo expression (LCM): '3.02662'
AT5G45440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.88252 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.49084 x 10-1 50 12 80.65% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3611 x 10-2 31 1 96.88% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.2291 x 10-2 283 61 103 149 82.27% 59.13% 344 252 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.6e-06'
Avg. expression score for this sample: '500.43'
Avg. expression score in LCM sample: '298.882'
Tissue used: 'pure endosperm, no chalazal'
AT5G45430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.4 x 10-5 351 107 97 292 76.64% 75.06% 458 389 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.6e-06'
Avg. expression score for this sample: '543.385'
Avg. expression score in LCM sample: '298.882'
Tissue used: 'full endosperm'
AT5G45430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.98415 x 10-1 101 77 27 33 56.74% 55.00% 178 60 TAIR8 Avg. embryo expression (dissected): '299.954'
Avg. embryo expression (LCM): '297.513'
AT5G45430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.55707 x 10-1 99 28 77.95% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.0 x 10-10 331 41 88.98% 372 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-17 533 55 90.65% 588 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45428 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.9377 x 10-2 246 81 118 257 75.23% 68.53% 327 375 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-09'
Avg. expression score for this sample: '458.786'
Avg. expression score in LCM sample: '396.564'
Tissue used: 'pure endosperm, no chalazal'
AT5G45428 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-8 500 175 144 544 74.07% 79.07% 675 688 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-09'
Avg. expression score for this sample: '694.672'
Avg. expression score in LCM sample: '396.564'
Tissue used: 'full endosperm'
AT5G45428 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.82723 x 10-1 112 129 45 43 46.47% 48.86% 241 88 TAIR8 Avg. embryo expression (dissected): '331.882'
Avg. embryo expression (LCM): '314.643'
AT5G45428 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 117 39 75.00% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45428 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-16 457 48 90.50% 505 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45428 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-19 624 67 90.30% 691 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45420 maMYB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.186 x 10-2 205 62 72 137 76.78% 65.55% 267 209 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000016'
Avg. expression score for this sample: '110.467'
Avg. expression score in LCM sample: '96.8446'
Tissue used: 'pure endosperm, no chalazal'
AT5G45420 maMYB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.6 x 10-5 458 65 267 486 87.57% 64.54% 523 753 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000016'
Avg. expression score for this sample: '188.086'
Avg. expression score in LCM sample: '96.8446'
Tissue used: 'full endosperm'
AT5G45420 maMYB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.94572 x 10-1 181 142 75 54 56.04% 41.86% 323 129 TAIR8 Avg. embryo expression (dissected): '158.026'
Avg. embryo expression (LCM): '210.281'
AT5G45420 maMYB endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6175 x 10-2 57 36 61.29% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45420 maMYB endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.8 x 10-5 818 414 66.40% 1232 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45420 maMYB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2015 83 96.04% 2098 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.38955 x 10-1 335 83 118 129 80.14% 52.23% 418 247 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-14'
Avg. expression score for this sample: '149.467'
Avg. expression score in LCM sample: '68.3894'
Tissue used: 'pure endosperm, no chalazal'
AT5G45410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-14 2283 204 990 1112 91.80% 52.90% 2487 2102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-14'
Avg. expression score for this sample: '672.435'
Avg. expression score in LCM sample: '68.3894'
Tissue used: 'full endosperm'
AT5G45410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.3 x 10-10 328 107 35 9 75.40% 20.45% 435 44 TAIR8 Avg. embryo expression (dissected): '141.434'
Avg. embryo expression (LCM): '175.305'
AT5G45410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.1 x 10-12 125 115 52.08% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-13 479 313 60.48% 792 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1640 60 96.47% 1700 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45400 RPA70C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.2575 x 10-2 118 49 84 55 70.66% 39.57% 167 139 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.133281'
Avg. expression score for this sample: '61.756'
Avg. expression score in LCM sample: '118.274'
Tissue used: 'pure endosperm, no chalazal'
AT5G45400 RPA70C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 177 34 136 165 83.89% 54.82% 211 301 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.133281'
Avg. expression score for this sample: '80.0053'
Avg. expression score in LCM sample: '118.274'
Tissue used: 'full endosperm'
AT5G45400 RPA70C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.39577 x 10-1 151 114 58 25 56.98% 30.12% 265 83 TAIR8 Avg. embryo expression (dissected): '97.8684'
Avg. embryo expression (LCM): '146.194'
AT5G45400 RPA70C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.69649 x 10-1 32 21 60.38% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45400 RPA70C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.36236 x 10-1 504 289 63.56% 793 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45400 RPA70C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-20 686 140 83.05% 826 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45390 CLPP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 168 75 72 122 69.14% 62.89% 243 194 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.295989'
Avg. expression score for this sample: '352.757'
Avg. expression score in LCM sample: '175.449'
Tissue used: 'pure endosperm, no chalazal'
AT5G45390 CLPP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.74054 x 10-1 268 112 185 412 70.53% 69.01% 380 597 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.295989'
Avg. expression score for this sample: '439.447'
Avg. expression score in LCM sample: '175.449'
Tissue used: 'full endosperm'
AT5G45390 CLPP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.2794 334 363 74 57 47.92% 43.51% 697 131 TAIR8 Avg. embryo expression (dissected): '908.818'
Avg. embryo expression (LCM): '737.628'
AT5G45390 CLPP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 96 44 68.57% 140 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45390 CLPP4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-5 387 105 78.66% 492 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45390 CLPP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.2 x 10-18 438 63 87.43% 501 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45380 DUR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.314366'
Avg. expression score in LCM sample: '1.17583'
Tissue used: 'pure endosperm, no chalazal'
AT5G45380 DUR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.492799'
Avg. expression score in LCM sample: '1.17583'
Tissue used: 'full endosperm'
AT5G45380 DUR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '.502343'
AT5G45380 DUR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45380 DUR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45380 DUR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45370 UMAMIT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.33718 x 10-1 7 4 1 9 63.64% 90.00% 11 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009935'
Avg. expression score for this sample: '15.427'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45370 UMAMIT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.739 x 10-3 5 0 1 27 100.00% 96.43% 5 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009935'
Avg. expression score for this sample: '33.008'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45370 UMAMIT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14286 x 10-1 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '16.1919'
Avg. embryo expression (LCM): '5.68904'
AT5G45370 UMAMIT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.82317 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45370 UMAMIT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.84 x 10-4 118 0 100.00% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45370 UMAMIT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2306 x 10-2 43 0 100.00% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '167.551'
Avg. expression score in LCM sample: '76.826'
Tissue used: 'pure endosperm, no chalazal'
AT5G45360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '185.645'
Avg. expression score in LCM sample: '76.826'
Tissue used: 'full endosperm'
AT5G45360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '98.7263'
Avg. embryo expression (LCM): '78.0139'
AT5G45360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.78784 x 10-1 235 129 164 340 64.56% 67.46% 364 504 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-25'
Avg. expression score for this sample: '2711.42'
Avg. expression score in LCM sample: '184.797'
Tissue used: 'pure endosperm, no chalazal'
AT5G45350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.0 x 10-30 1309 652 755 3179 66.75% 80.81% 1961 3934 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-25'
Avg. expression score for this sample: '4219.48'
Avg. expression score in LCM sample: '184.797'
Tissue used: 'full endosperm'
AT5G45350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 30 32 4 4 48.39% 50.00% 62 8 TAIR8 Avg. embryo expression (dissected): '370.149'
Avg. embryo expression (LCM): '135.972'
AT5G45350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.06934 x 10-1 351 140 71.49% 491 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.9 x 10-9 1494 343 81.33% 1837 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1019 x 10-2 1056 412 71.93% 1468 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45340 CYP707A3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 17 6 4 3 73.91% 42.86% 23 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.822537'
Avg. expression score for this sample: '16.0098'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45340 CYP707A3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.15653 x 10-1 112 64 57 143 63.64% 71.50% 176 200 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.822537'
Avg. expression score for this sample: '116.126'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45340 CYP707A3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.58074 x 10-1 42 33 9 8 56.00% 47.06% 75 17 TAIR8 Avg. embryo expression (dissected): '67.8155'
Avg. embryo expression (LCM): '2.08472'
AT5G45340 CYP707A3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45340 CYP707A3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 20 9 68.97% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45340 CYP707A3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.371 x 10-3 46 8 85.19% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45330 DCP5-L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 33 19 12 30 63.46% 71.43% 52 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.65625'
Avg. expression score for this sample: '34.3413'
Avg. expression score in LCM sample: '44.1231'
Tissue used: 'pure endosperm, no chalazal'
AT5G45330 DCP5-L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.86749 x 10-1 62 19 40 74 76.54% 64.91% 81 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.65625'
Avg. expression score for this sample: '46.6409'
Avg. expression score in LCM sample: '44.1231'
Tissue used: 'full endosperm'
AT5G45330 DCP5-L embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.02878 x 10-1 31 20 11 17 60.78% 60.71% 51 28 TAIR8 Avg. embryo expression (dissected): '53.7962'
Avg. embryo expression (LCM): '88.9524'
AT5G45330 DCP5-L endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.39463 x 10-1 27 7 79.41% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45330 DCP5-L endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2948 x 10-2 104 25 80.62% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45330 DCP5-L endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.4 x 10-8 176 21 89.34% 197 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02941 x 10-1 9 0 0 0 100.00% 9 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000033'
Avg. expression score for this sample: '2.6949'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6 x 10-4 19 0 0 14 100.00% 100.00% 19 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000033'
Avg. expression score for this sample: '7.88848'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G45320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 84 2 97.67% 86 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 176 0 100.00% 176 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 3 0 100.00% 0.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.2109'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 33 27 22 67 55.00% 75.28% 60 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '37.7177'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.70223 x 10-1 12 27 0 3 30.77% 100.00% 39 3 TAIR8 Avg. embryo expression (dissected): '21.8054'
Avg. embryo expression (LCM): '0'
AT5G45310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.617 x 10-3 15 21 41.67% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.05 x 10-3 19 25 43.18% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45307 MIR168B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45307 MIR168B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45307 MIR168B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G45307 MIR168B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45307 MIR168B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45307 MIR168B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'