| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM5G840955 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1510 | 601 | 1350 | 494 | 71.53% | 26.79% | 2111 | 1844 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G840955 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.047431 x 10-1 | 104 | 67 | 78 | 61 | 60.82% | 43.88% | 171 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1047431' χ2 p-value for Mo17 x B73: '1.21e-08' Biased in favor of strain: '' |
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| GRMZM5G840928 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.615029 x 10-1 | 143 | 71 | 99 | 125 | 66.82% | 55.80% | 214 | 224 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9615029' χ2 p-value for Mo17 x B73: '.0005628' Biased in favor of strain: '' |
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| GRMZM5G840928 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.334 x 10-4 | 569 | 375 | 494 | 381 | 60.28% | 43.54% | 944 | 875 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.72e-10' χ2 p-value for Mo17 x B73: '.0001334' Biased in favor of strain: 'B73' |
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| GRMZM5G840909 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8 x 10-10 | 659 | 297 | 507 | 325 | 68.93% | 39.06% | 956 | 832 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.16e-31' χ2 p-value for Mo17 x B73: '2.80e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G840909 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1161 | 264 | 733 | 564 | 81.47% | 43.48% | 1425 | 1297 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.98e-32' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G840887 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 6 | 8 | 100.00% | 57.14% | 7 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.4496917' Biased in favor of strain: '' |
|||||
| GRMZM5G840887 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 3 | 11 | 100.00% | 78.57% | 8 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: '' |
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| GRMZM5G840699 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 16 | 16 | 35 | 26 | 50.00% | 42.62% | 32 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2491847' Biased in favor of strain: '' |
||||
| GRMZM5G840699 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.445321 x 10-1 | 9 | 4 | 9 | 16 | 69.23% | 64.00% | 13 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8445321' χ2 p-value for Mo17 x B73: '.7772972' Biased in favor of strain: '' |
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| GRMZM5G840614 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
|||||
| GRMZM5G840614 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 1 | 0 | 50.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G840610 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.473148 x 10-1 | 22 | 15 | 23 | 20 | 59.46% | 46.51% | 37 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2498174' χ2 p-value for Mo17 x B73: '.6473148' Biased in favor of strain: '' |
||||
| GRMZM5G840610 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.020281 x 10-1 | 9 | 9 | 10 | 13 | 50.00% | 56.52% | 18 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1336079' χ2 p-value for Mo17 x B73: '.3020281' Biased in favor of strain: '' |
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| GRMZM5G840582 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.87383 x 10-2 | 7 | 18 | 6 | 25 | 28.00% | 80.65% | 25 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000411' χ2 p-value for Mo17 x B73: '.0987383' Biased in favor of strain: '' |
||||
| GRMZM5G840582 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.14 x 10-11 | 30 | 131 | 30 | 108 | 18.63% | 78.26% | 161 | 138 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.72e-15' χ2 p-value for Mo17 x B73: '3.14e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM5G840560 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.216236 x 10-1 | 35 | 46 | 27 | 51 | 43.21% | 65.38% | 81 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2216236' χ2 p-value for Mo17 x B73: '.0065784' Biased in favor of strain: '' |
||||
| GRMZM5G840560 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3 x 10-6 | 84 | 9 | 81 | 63 | 90.32% | 43.75% | 93 | 144 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.30e-06' χ2 p-value for Mo17 x B73: '5.42e-09' Biased in favor of strain: 'B73' |
||||
| GRMZM5G840538 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM5G840538 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.32 x 10-8 | 30 | 0 | 49 | 0 | 100.00% | 0.00% | 30 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.32e-08' χ2 p-value for Mo17 x B73: '2.56e-12' Biased in favor of strain: 'B73' |
||||
| GRMZM5G840487 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.571 x 10-4 | 139 | 52 | 103 | 60 | 72.77% | 36.81% | 191 | 163 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.07e-10' χ2 p-value for Mo17 x B73: '.0007571' Biased in favor of strain: 'B73' |
||||
| GRMZM5G840487 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 725 | 79 | 265 | 100 | 90.17% | 27.40% | 804 | 365 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM5G840435 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.12 x 10-20 | 562 | 106 | 277 | 251 | 84.13% | 47.54% | 668 | 528 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.01e-21' χ2 p-value for Mo17 x B73: '1.12e-20' Biased in favor of strain: 'B73' |
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| GRMZM5G840435 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.21 x 10-14 | 368 | 139 | 301 | 142 | 72.58% | 32.05% | 507 | 443 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.69e-24' χ2 p-value for Mo17 x B73: '4.21e-14' Biased in favor of strain: 'B73' |
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| GRMZM5G840225 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.71 x 10-24 | 883 | 506 | 824 | 443 | 63.57% | 34.96% | 1389 | 1267 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.71e-24' χ2 p-value for Mo17 x B73: '9.77e-27' Biased in favor of strain: 'B73' |
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| GRMZM5G840225 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 3.92 x 10-12 | 243 | 228 | 271 | 249 | 51.59% | 47.88% | 471 | 520 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.92e-12' χ2 p-value for Mo17 x B73: '1.03e-19' Biased in favor of strain: '' |
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| GRMZM5G840013 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.69 x 10-5 | 414 | 142 | 209 | 250 | 74.46% | 54.47% | 556 | 459 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000969' χ2 p-value for Mo17 x B73: '2.94e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G840013 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5 x 10-6 | 424 | 295 | 373 | 252 | 58.97% | 40.32% | 719 | 625 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.50e-06' χ2 p-value for Mo17 x B73: '1.30e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G840002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.49322 x 10-2 | 1502 | 985 | 1203 | 1289 | 60.39% | 51.73% | 2487 | 2492 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.50e-25' χ2 p-value for Mo17 x B73: '.0849322' Biased in favor of strain: '' |
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| GRMZM5G840002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.15418 x 10-2 | 1688 | 987 | 976 | 2084 | 63.10% | 68.10% | 2675 | 3060 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000922' χ2 p-value for Mo17 x B73: '.0915418' Biased in favor of strain: '' |
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| GRMZM5G839920 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.65 x 10-27 | 249 | 3 | 76 | 5 | 98.81% | 6.17% | 252 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.65e-27' χ2 p-value for Mo17 x B73: '7.43e-31' Biased in favor of strain: 'B73' |
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| GRMZM5G839920 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.93 x 10-16 | 93 | 11 | 116 | 1 | 89.42% | 0.85% | 104 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.93e-16' χ2 p-value for Mo17 x B73: '2.12e-26' Biased in favor of strain: 'B73' |
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| GRMZM5G839812 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.65003 x 10-2 | 210 | 258 | 159 | 279 | 44.87% | 63.70% | 468 | 438 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0265003' χ2 p-value for Mo17 x B73: '9.82e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM5G839812 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.65 x 10-5 | 66 | 80 | 45 | 177 | 45.21% | 79.73% | 146 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.78e-08' χ2 p-value for Mo17 x B73: '.0000365' Biased in favor of strain: 'Mo17' |
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| GRMZM5G839794 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.257421 x 10-1 | 45 | 32 | 72 | 200 | 58.44% | 73.53% | 77 | 272 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1257421' χ2 p-value for Mo17 x B73: '.0163513' Biased in favor of strain: '' |
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| GRMZM5G839794 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.0343 x 10-3 | 76 | 28 | 61 | 94 | 73.08% | 60.65% | 104 | 155 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.52e-06' χ2 p-value for Mo17 x B73: '.0080343' Biased in favor of strain: '' |
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| GRMZM5G839640 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 19 | 0 | 66.67% | 0.00% | 6 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.0000131' Biased in favor of strain: '' |
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| GRMZM5G839640 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G839593 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1500 | 211 | 756 | 366 | 87.67% | 32.62% | 1711 | 1122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G839593 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.3495 x 10-3 | 663 | 552 | 588 | 693 | 54.57% | 54.10% | 1215 | 1281 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0014503' χ2 p-value for Mo17 x B73: '.0033495' Biased in favor of strain: '' |
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| GRMZM5G839518 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.12 x 10-6 | 435 | 240 | 398 | 281 | 64.44% | 41.38% | 675 | 679 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.12e-14' χ2 p-value for Mo17 x B73: '7.12e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G839518 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.78 x 10-12 | 784 | 233 | 332 | 392 | 77.09% | 54.14% | 1017 | 724 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.78e-12' χ2 p-value for Mo17 x B73: '8.80e-13' Biased in favor of strain: 'B73' |
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| GRMZM5G839512 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.5926 x 10-3 | 1179 | 505 | 804 | 992 | 70.01% | 55.23% | 1684 | 1796 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0035926' χ2 p-value for Mo17 x B73: '8.85e-25' Biased in favor of strain: 'B73' |
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| GRMZM5G839512 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.88 x 10-5 | 920 | 721 | 842 | 685 | 56.06% | 44.86% | 1641 | 1527 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.99e-07' χ2 p-value for Mo17 x B73: '.0000588' Biased in favor of strain: 'B73' |
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| GRMZM5G839422 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.192434 x 10-1 | 255 | 228 | 281 | 230 | 52.80% | 45.01% | 483 | 511 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2192434' χ2 p-value for Mo17 x B73: '.0240639' Biased in favor of strain: '' |
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| GRMZM5G839422 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 9.88 x 10-15 | 211 | 219 | 176 | 81 | 49.07% | 31.52% | 430 | 257 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.88e-15' χ2 p-value for Mo17 x B73: '6.24e-33' Biased in favor of strain: '' |
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| GRMZM5G839416 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G839416 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 50 | 58 | 41 | 41 | 46.30% | 50.00% | 108 | 82 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4414183' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G839411 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 3 | 8 | 1 | 66.67% | 11.11% | 9 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: '' |
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| GRMZM5G839411 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G839384 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 8 | 0.00% | 100.00% | 2 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM5G839384 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G839349 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6998 x 10-3 | 83 | 18 | 27 | 9 | 82.18% | 25.00% | 101 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.95e-11' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: 'B73' |
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| GRMZM5G839349 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.98 x 10-9 | 98 | 5 | 42 | 19 | 95.15% | 31.15% | 103 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.72e-10' χ2 p-value for Mo17 x B73: '3.98e-09' Biased in favor of strain: 'B73' |
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| GRMZM5G839114 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 4 | 0.00% | 100.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G839114 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G839014 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5 x 10-29 | 464 | 178 | 482 | 160 | 72.27% | 24.92% | 642 | 642 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.51e-29' χ2 p-value for Mo17 x B73: '5.32e-37' Biased in favor of strain: 'B73' |
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| GRMZM5G839014 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.11 x 10-10 | 191 | 28 | 123 | 51 | 87.21% | 29.31% | 219 | 174 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.11e-10' χ2 p-value for Mo17 x B73: '1.42e-25' Biased in favor of strain: 'B73' |
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| GRMZM5G838910 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 6 | 0.00% | 100.00% | 6 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM5G838910 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.09213 x 10-2 | 2 | 10 | 1 | 19 | 16.67% | 95.00% | 12 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0209213' χ2 p-value for Mo17 x B73: '.000057' Biased in favor of strain: 'Mo17' |
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| GRMZM5G838907 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.233396 x 10-1 | 22 | 17 | 21 | 8 | 56.41% | 27.59% | 39 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4233396' χ2 p-value for Mo17 x B73: '.0157768' Biased in favor of strain: '' |
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| GRMZM5G838907 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G838853 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 1 | 0 | 0 | 90.00% | 10 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G838853 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G838812 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.402 x 10-4 | 16 | 42 | 2 | 64 | 27.59% | 96.97% | 58 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006402' χ2 p-value for Mo17 x B73: '2.32e-14' Biased in favor of strain: 'Mo17' |
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| GRMZM5G838812 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.93 x 10-10 | 104 | 5 | 45 | 8 | 95.41% | 15.09% | 109 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.93e-10' χ2 p-value for Mo17 x B73: '1.66e-15' Biased in favor of strain: 'B73' |
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| GRMZM5G838754 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G838754 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 5 | 0 | 100.00% | 0.00% | 4 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM5G838671 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.2904 x 10-3 | 35 | 66 | 28 | 52 | 34.65% | 65.00% | 101 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020382' χ2 p-value for Mo17 x B73: '.0072904' Biased in favor of strain: 'Mo17' |
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| GRMZM5G838671 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0204 x 10-3 | 22 | 61 | 18 | 79 | 26.51% | 81.44% | 83 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.39e-15' χ2 p-value for Mo17 x B73: '.0020204' Biased in favor of strain: 'Mo17' |
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| GRMZM5G838435 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1541 x 10-3 | 0 | 13 | 2 | 30 | 0.00% | 93.75% | 13 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.41e-07' χ2 p-value for Mo17 x B73: '.0011541' Biased in favor of strain: 'Mo17' |
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| GRMZM5G838435 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 0 | 3 | 0.00% | 100.00% | 8 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM5G838414 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.57899 x 10-1 | 41 | 10 | 29 | 21 | 80.39% | 42.00% | 51 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000142' χ2 p-value for Mo17 x B73: '.257899' Biased in favor of strain: '' |
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| GRMZM5G838414 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.84481 x 10-1 | 70 | 37 | 27 | 40 | 65.42% | 59.70% | 107 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.784481' χ2 p-value for Mo17 x B73: '.226503' Biased in favor of strain: '' |
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| GRMZM5G838285 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G838285 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.967056 x 10-1 | 5 | 10 | 2 | 9 | 33.33% | 81.82% | 15 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1967056' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |
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| GRMZM5G838098 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.138463 x 10-1 | 55 | 26 | 25 | 15 | 67.90% | 37.50% | 81 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001272' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: '' |
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| GRMZM5G838098 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.28 x 10-23 | 528 | 58 | 210 | 152 | 90.10% | 41.99% | 586 | 362 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.34e-33' χ2 p-value for Mo17 x B73: '2.28e-23' Biased in favor of strain: 'B73' |
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| GRMZM5G837872 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.6512 x 10-3 | 72 | 13 | 30 | 31 | 84.71% | 50.82% | 85 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004187' χ2 p-value for Mo17 x B73: '.0086512' Biased in favor of strain: 'B73' |
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| GRMZM5G837872 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.22036 x 10-2 | 92 | 61 | 63 | 37 | 60.13% | 37.00% | 153 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0122036' χ2 p-value for Mo17 x B73: '.0093224' Biased in favor of strain: 'B73' |
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| GRMZM5G837869 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.371178 x 10-1 | 73 | 69 | 78 | 85 | 51.41% | 52.15% | 142 | 163 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7371178' χ2 p-value for Mo17 x B73: '.5834981' Biased in favor of strain: '' |
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| GRMZM5G837869 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.49548 x 10-2 | 90 | 27 | 57 | 82 | 76.92% | 58.99% | 117 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0186051' χ2 p-value for Mo17 x B73: '.0549548' Biased in favor of strain: '' |
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| GRMZM5G837822 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G837822 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 5 | 1 | 100.00% | 16.67% | 2 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM5G837626 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.004147 x 10-1 | 723 | 627 | 502 | 529 | 53.56% | 51.31% | 1350 | 1031 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0089807' χ2 p-value for Mo17 x B73: '.4004147' Biased in favor of strain: '' |
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| GRMZM5G837626 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.4888 x 10-3 | 570 | 224 | 283 | 461 | 71.79% | 61.96% | 794 | 744 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0022032' χ2 p-value for Mo17 x B73: '.0064888' Biased in favor of strain: 'B73' |
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| GRMZM5G837606 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G837606 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 1 | 0 | 0.00% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G837364 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1062 x 10-3 | 348 | 207 | 218 | 155 | 62.70% | 41.55% | 555 | 373 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.16e-09' χ2 p-value for Mo17 x B73: '.0011062' Biased in favor of strain: 'B73' |
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| GRMZM5G837364 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.575498 x 10-1 | 374 | 184 | 287 | 363 | 67.03% | 55.85% | 558 | 650 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8575498' χ2 p-value for Mo17 x B73: '4.85e-09' Biased in favor of strain: '' |
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| GRMZM5G837108 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.971598 x 10-1 | 34 | 12 | 11 | 48 | 73.91% | 81.36% | 46 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2971598' χ2 p-value for Mo17 x B73: '.0166888' Biased in favor of strain: '' |
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| GRMZM5G837108 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.4063 x 10-3 | 135 | 61 | 84 | 49 | 68.88% | 36.84% | 196 | 133 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.25e-07' χ2 p-value for Mo17 x B73: '.0024063' Biased in favor of strain: 'B73' |
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| GRMZM5G837058 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.583697 x 10-1 | 204 | 188 | 184 | 183 | 52.04% | 49.86% | 392 | 367 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4190203' χ2 p-value for Mo17 x B73: '.9583697' Biased in favor of strain: '' |
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| GRMZM5G837058 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.444292 x 10-1 | 150 | 61 | 81 | 149 | 71.09% | 64.78% | 211 | 230 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1728969' χ2 p-value for Mo17 x B73: '.5444292' Biased in favor of strain: '' |
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| GRMZM5G837018 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.7 x 10-5 | 78 | 12 | 85 | 39 | 86.67% | 31.45% | 90 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000057' χ2 p-value for Mo17 x B73: '8.91e-17' Biased in favor of strain: 'B73' |
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| GRMZM5G837018 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.98 x 10-11 | 436 | 264 | 382 | 199 | 62.29% | 34.25% | 700 | 581 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.98e-11' χ2 p-value for Mo17 x B73: '3.15e-14' Biased in favor of strain: 'B73' |
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| GRMZM5G836977 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G836977 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.15563 x 10-2 | 5 | 9 | 1 | 15 | 35.71% | 93.75% | 14 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0140183' χ2 p-value for Mo17 x B73: '.0215563' Biased in favor of strain: '' |
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| GRMZM5G836910 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.0 x 10-30 | 2323 | 718 | 1020 | 913 | 76.39% | 47.23% | 3041 | 1933 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.67e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G836910 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5371 | 3506 | 4688 | 3185 | 60.50% | 40.45% | 8877 | 7873 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |