Displaying data sets 149801 - 149900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G31870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6 x 10-13 403 63 86.48% 466 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.91 x 10-3 135 23 59 128 85.44% 68.45% 158 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.49647'
Avg. expression score for this sample: '122.858'
Avg. expression score in LCM sample: '53.956'
Tissue used: 'full endosperm'
AT1G31860 AT-IE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 28 11 25 43 71.79% 63.24% 39 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '44.5305'
Avg. expression score in LCM sample: '4.15951'
Tissue used: 'full endosperm'
AT1G31860 AT-IE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0628 x 10-2 49 11 81.67% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31860 AT-IE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 6 3 12 60.00% 80.00% 15 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '29.4899'
Avg. expression score in LCM sample: '4.15951'
Tissue used: 'pure endosperm, no chalazal'
AT1G31860 AT-IE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 30 28 6 5 51.72% 45.45% 58 11 TAIR8 Avg. embryo expression (dissected): '86.8584'
Avg. embryo expression (LCM): '144.537'
AT1G31860 AT-IE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.10923 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31860 AT-IE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0301 x 10-2 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7737 x 10-2 149 31 82.78% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4 x 10-25 522 33 94.05% 555 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.49331 x 10-1 175 57 86 177 75.43% 67.30% 232 263 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.3e-09'
Avg. expression score for this sample: '59.4301'
Avg. expression score in LCM sample: '34.2608'
Tissue used: 'pure endosperm, no chalazal'
AT1G31850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 947 39 96.04% 986 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9 x 10-9 414 126 172 589 76.67% 77.40% 540 761 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.3e-09'
Avg. expression score for this sample: '107.836'
Avg. expression score in LCM sample: '34.2608'
Tissue used: 'full endosperm'
AT1G31850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.84548 x 10-1 61 101 16 33 37.65% 67.35% 162 49 TAIR8 Avg. embryo expression (dissected): '39.1521'
Avg. embryo expression (LCM): '30.8941'
AT1G31840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.80032 x 10-1 21 9 5 6 70.00% 54.55% 30 11 TAIR8 Avg. embryo expression (dissected): '10.3975'
Avg. embryo expression (LCM): '15.761'
AT1G31840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7047 x 10-1 39 8 82.98% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.3978 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.39854 x 10-1 9 7 10 30 56.25% 75.00% 16 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.360765'
Avg. expression score for this sample: '8.40645'
Avg. expression score in LCM sample: '5.6734'
Tissue used: 'full endosperm'
AT1G31840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3193 x 10-2 64 6 91.43% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.5449 x 10-2 7 1 0 9 87.50% 100.00% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.360765'
Avg. expression score for this sample: '3.86198'
Avg. expression score in LCM sample: '5.6734'
Tissue used: 'pure endosperm, no chalazal'
AT1G31835 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 17 3 10 7 85.00% 41.18% 20 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.351629'
Avg. expression score for this sample: '18.1628'
Avg. expression score in LCM sample: '18.8133'
Tissue used: 'pure endosperm, no chalazal'
AT1G31835 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.311 x 10-3 42 2 95.45% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31835 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.59112 x 10-1 35 7 6 11 83.33% 64.71% 42 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.351629'
Avg. expression score for this sample: '17.0158'
Avg. expression score in LCM sample: '18.8133'
Tissue used: 'full endosperm'
AT1G31835 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.91053 x 10-1 42 16 13 4 72.41% 23.53% 58 17 TAIR8 Avg. embryo expression (dissected): '52.8839'
Avg. embryo expression (LCM): '78.3655'
AT1G31835 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.2618 x 10-2 4 7 36.36% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31835 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.1619 x 10-2 9 9 50.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31830 PUT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1615 74 95.62% 1689 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31830 PUT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1 x 10-7 350 64 84.54% 414 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31830 PUT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-16 1125 645 402 1997 63.56% 83.24% 1770 2399 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.1e-16'
Avg. expression score for this sample: '788.046'
Avg. expression score in LCM sample: '304.35'
Tissue used: 'full endosperm'
AT1G31830 PUT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1979 225 89.79% 2204 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31830 PUT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9421 x 10-2 485 393 191 891 55.24% 82.35% 878 1082 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.1e-16'
Avg. expression score for this sample: '592.792'
Avg. expression score in LCM sample: '304.35'
Tissue used: 'pure endosperm, no chalazal'
AT1G31830 PUT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2761 x 10-2 985 1180 279 289 45.50% 50.88% 2165 568 TAIR8 Avg. embryo expression (dissected): '1279.11'
Avg. embryo expression (LCM): '675.89'
AT1G31820 PUT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.41979 x 10-1 18 28 5 4 39.13% 44.44% 46 9 TAIR8 Avg. embryo expression (dissected): '11.3777'
Avg. embryo expression (LCM): '3.64199'
AT1G31820 PUT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.38673 x 10-1 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31820 PUT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.8 x 10-5 154 7 95.65% 161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31820 PUT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.0122 x 10-1 29 14 4 17 67.44% 80.95% 43 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-06'
Avg. expression score for this sample: '9.10482'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'pure endosperm, no chalazal'
AT1G31820 PUT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-23 660 4 99.40% 664 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31820 PUT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5 x 10-7 162 27 10 66 85.71% 86.84% 189 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-06'
Avg. expression score for this sample: '25.5409'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'full endosperm'
AT1G31817 NFD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.56265 x 10-1 83 26 63 105 76.15% 62.50% 109 168 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205181'
Avg. expression score for this sample: '81.5106'
Avg. expression score in LCM sample: '38.7437'
Tissue used: 'full endosperm'
AT1G31817 NFD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.509 x 10-3 220 49 81.78% 269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31817 NFD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.6015 x 10-2 80 15 18 29 84.21% 61.70% 95 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205181'
Avg. expression score for this sample: '83.5363'
Avg. expression score in LCM sample: '38.7437'
Tissue used: 'pure endosperm, no chalazal'
AT1G31817 NFD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.82841 x 10-1 114 74 22 12 60.64% 35.29% 188 34 TAIR8 Avg. embryo expression (dissected): '147.492'
Avg. embryo expression (LCM): '220.34'
AT1G31817 NFD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.392 x 10-2 350 106 76.75% 456 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31817 NFD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.29452 x 10-1 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31814 FRL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31814 FRL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 34 13 72.34% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31814 FRL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.97226 x 10-1 18 3 7 7 85.71% 50.00% 21 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352677'
Avg. expression score for this sample: '28.3798'
Avg. expression score in LCM sample: '10.0828'
Tissue used: 'pure endosperm, no chalazal'
AT1G31814 FRL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.751 x 10-3 65 6 91.55% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31814 FRL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.32657 x 10-1 23 4 12 23 85.19% 65.71% 27 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352677'
Avg. expression score for this sample: '47.8161'
Avg. expression score in LCM sample: '10.0828'
Tissue used: 'full endosperm'
AT1G31814 FRL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.96004 x 10-1 11 3 2 1 78.57% 33.33% 14 3 TAIR8 Avg. embryo expression (dissected): '31.8247'
Avg. embryo expression (LCM): '26.5237'
AT1G31812 ACBP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1212.93'
Avg. embryo expression (LCM): '1019.28'
AT1G31812 ACBP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31812 ACBP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31812 ACBP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '715.057'
Avg. expression score in LCM sample: '572.234'
Tissue used: 'full endosperm'
AT1G31812 ACBP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31812 ACBP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '987.07'
Avg. expression score in LCM sample: '572.234'
Tissue used: 'pure endosperm, no chalazal'
AT1G31810 AFH14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.422 x 10-2 48 21 10 65 69.57% 86.67% 69 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055555'
Avg. expression score for this sample: '56.6861'
Avg. expression score in LCM sample: '46.6365'
Tissue used: 'pure endosperm, no chalazal'
AT1G31810 AFH14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-6 132 14 90.41% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31810 AFH14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.51845 x 10-1 95 32 46 89 74.80% 65.93% 127 135 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055555'
Avg. expression score for this sample: '73.4142'
Avg. expression score in LCM sample: '46.6365'
Tissue used: 'full endosperm'
AT1G31810 AFH14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.27477 x 10-1 49 37 26 23 56.98% 46.94% 86 49 TAIR8 Avg. embryo expression (dissected): '106.565'
Avg. embryo expression (LCM): '45.55'
AT1G31810 AFH14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.59363 x 10-1 27 13 67.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31810 AFH14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.51252 x 10-1 61 14 81.33% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31800 CYP97A3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31800 CYP97A3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31800 CYP97A3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.5671 1 2 2 1 33.33% 33.33% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409859'
Avg. expression score for this sample: '52.6011'
Avg. expression score in LCM sample: '7.15788'
Tissue used: 'full endosperm'
AT1G31800 CYP97A3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31800 CYP97A3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 2 100.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409859'
Avg. expression score for this sample: '27.3803'
Avg. expression score in LCM sample: '7.15788'
Tissue used: 'pure endosperm, no chalazal'
AT1G31800 CYP97A3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 1 0.00% 50.00% 1 2 TAIR8 Avg. embryo expression (dissected): '83.5095'
Avg. embryo expression (LCM): '83.1127'
AT1G31790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '77.1106'
Avg. embryo expression (LCM): '68.0926'
AT1G31790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '16.1152'
Avg. expression score in LCM sample: '3.32173'
Tissue used: 'pure endosperm, no chalazal'
AT1G31790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.82043 x 10-1 3 0 1 6 100.00% 85.71% 3 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '40.5525'
Avg. expression score in LCM sample: '3.32173'
Tissue used: 'full endosperm'
AT1G31780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-19 1993 573 821 2078 77.67% 71.68% 2566 2899 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-21'
Avg. expression score for this sample: '435.088'
Avg. expression score in LCM sample: '381.279'
Tissue used: 'full endosperm'
AT1G31780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6208 774 88.91% 6982 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.0 x 10-5 1675 598 770 1636 73.69% 68.00% 2273 2406 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-21'
Avg. expression score for this sample: '520.916'
Avg. expression score in LCM sample: '381.279'
Tissue used: 'pure endosperm, no chalazal'
AT1G31780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.377 x 10-3 1186 864 493 419 57.85% 45.94% 2050 912 TAIR8 Avg. embryo expression (dissected): '550.213'
Avg. embryo expression (LCM): '291.171'
AT1G31780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.56 x 10-4 6381 2695 70.31% 9076 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.2769 x 10-1 476 176 73.01% 652 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31772 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31772 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31772 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G31772 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31772 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G31772 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G31770 ABCG14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 2 4 0 77.78% 0.00% 9 4 TAIR8 Avg. embryo expression (dissected): '52.7659'
Avg. embryo expression (LCM): '58.9248'
AT1G31770 ABCG14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31770 ABCG14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31770 ABCG14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02941 x 10-1 5 0 0 4 100.00% 100.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087683'
Avg. expression score for this sample: '20.1911'
Avg. expression score in LCM sample: '19.7834'
Tissue used: 'full endosperm'
AT1G31770 ABCG14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31770 ABCG14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.76471 x 10-1 4 1 0 4 80.00% 100.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087683'
Avg. expression score for this sample: '19.7201'
Avg. expression score in LCM sample: '19.7834'
Tissue used: 'pure endosperm, no chalazal'
AT1G31760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685082'
Avg. expression score for this sample: '69.9685'
Avg. expression score in LCM sample: '52.9419'
Tissue used: 'pure endosperm, no chalazal'
AT1G31760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.48872 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.81659 x 10-1 11 2 1 1 84.62% 50.00% 13 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685082'
Avg. expression score for this sample: '98.6196'
Avg. expression score in LCM sample: '52.9419'
Tissue used: 'full endosperm'
AT1G31760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 3 1 0 2 75.00% 100.00% 4 2 TAIR8 Avg. embryo expression (dissected): '281.374'
Avg. embryo expression (LCM): '510.531'
AT1G31760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.30444 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.54799 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.01512 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G31750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.5 x 10-5 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'