Displaying data sets 149601 - 149700 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G32210 ATDAD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '341.066'
Avg. expression score in LCM sample: '201.553'
Tissue used: 'pure endosperm, no chalazal'
AT1G32210 ATDAD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32210 ATDAD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '635.238'
Avg. embryo expression (LCM): '400.556'
AT1G32210 ATDAD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32200 ATS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32200 ATS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.82043 x 10-1 2 0 1 7 100.00% 87.50% 2 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.134614'
Avg. expression score for this sample: '28.0512'
Avg. expression score in LCM sample: '9.11271'
Tissue used: 'full endosperm'
AT1G32200 ATS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32200 ATS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 6 4 6 0 60.00% 0.00% 10 6 TAIR8 Avg. embryo expression (dissected): '50.8382'
Avg. embryo expression (LCM): '45.3113'
AT1G32200 ATS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32200 ATS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 3 1 0 4 75.00% 100.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.134614'
Avg. expression score for this sample: '13.3877'
Avg. expression score in LCM sample: '9.11271'
Tissue used: 'pure endosperm, no chalazal'
AT1G32190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1165.51'
Avg. expression score in LCM sample: '291.416'
Tissue used: 'pure endosperm, no chalazal'
AT1G32190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1110.66'
Avg. embryo expression (LCM): '486.369'
AT1G32190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '325.849'
Avg. expression score in LCM sample: '291.416'
Tissue used: 'full endosperm'
AT1G32180 CSLD6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.65414'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'full endosperm'
AT1G32180 CSLD6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32180 CSLD6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G32180 CSLD6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.20973 x 10-1 93 52 64.14% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32180 CSLD6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.4108'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'pure endosperm, no chalazal'
AT1G32180 CSLD6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.70933 x 10-1 187 63 74.80% 250 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32172 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7649 x 10-1 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32172 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32172 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4472 x 10-1 9 1 1 2 90.00% 66.67% 10 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232547'
Avg. expression score for this sample: '1.73913'
Avg. expression score in LCM sample: '2.16059'
Tissue used: 'full endosperm'
AT1G32172 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 3 0 3 70.00% 100.00% 10 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232547'
Avg. expression score for this sample: '2.52266'
Avg. expression score in LCM sample: '2.16059'
Tissue used: 'pure endosperm, no chalazal'
AT1G32172 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32172 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 3 1 50.00% 25.00% 4 4 TAIR8 Avg. embryo expression (dissected): '3.5489'
Avg. embryo expression (LCM): '3.07685'
AT1G32170 XTH30 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '4.09924'
Avg. embryo expression (LCM): '4.86017'
AT1G32170 XTH30 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 35 1 97.22% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32170 XTH30 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.963 x 10-3 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32170 XTH30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-06'
Avg. expression score for this sample: '32.2654'
Avg. expression score in LCM sample: '14.7714'
Tissue used: 'pure endosperm, no chalazal'
AT1G32170 XTH30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-5 24 0 2 37 100.00% 94.87% 24 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-06'
Avg. expression score for this sample: '141.32'
Avg. expression score in LCM sample: '14.7714'
Tissue used: 'full endosperm'
AT1G32170 XTH30 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.95504 x 10-1 12 6 66.67% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.54264 x 10-1 66 19 53 99 77.65% 65.13% 85 152 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.480681'
Avg. expression score for this sample: '37.2545'
Avg. expression score in LCM sample: '12.5961'
Tissue used: 'full endosperm'
AT1G32160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0001 105 15 87.50% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.04379 x 10-1 44 36 9 14 55.00% 60.87% 80 23 TAIR8 Avg. embryo expression (dissected): '38.2846'
Avg. embryo expression (LCM): '73.5556'
AT1G32160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.43991 x 10-1 18 14 4 23 56.25% 85.19% 32 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.480681'
Avg. expression score for this sample: '13.6498'
Avg. expression score in LCM sample: '12.5961'
Tissue used: 'pure endosperm, no chalazal'
AT1G32160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3 x 10-8 83 4 95.40% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32150 bZIP68 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.73825 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32150 bZIP68 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.26954 x 10-1 24 3 14 5 88.89% 26.32% 27 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.099775'
Avg. expression score for this sample: '39.4792'
Avg. expression score in LCM sample: '24.7366'
Tissue used: 'pure endosperm, no chalazal'
AT1G32150 bZIP68 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3764 x 10-2 108 26 33 72 80.60% 68.57% 134 105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.099775'
Avg. expression score for this sample: '65.4535'
Avg. expression score in LCM sample: '24.7366'
Tissue used: 'full endosperm'
AT1G32150 bZIP68 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32150 bZIP68 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5336 x 10-1 19 2 5 0 90.48% 0.00% 21 5 TAIR8 Avg. embryo expression (dissected): '31.8422'
Avg. embryo expression (LCM): '35.2268'
AT1G32150 bZIP68 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.41 x 10-4 63 4 94.03% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.327308'
Avg. embryo expression (LCM): '0'
AT1G32140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G32140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6667 x 10-2 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.101989'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G32130 IWS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 898 293 332 1640 75.40% 83.16% 1191 1972 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-28'
Avg. expression score for this sample: '1621.42'
Avg. expression score in LCM sample: '343.108'
Tissue used: 'full endosperm'
AT1G32130 IWS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.2 x 10-7 320 46 87.43% 366 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32130 IWS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 235 271 68 105 46.44% 60.69% 506 173 TAIR8 Avg. embryo expression (dissected): '831.892'
Avg. embryo expression (LCM): '486.796'
AT1G32130 IWS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1970 236 89.30% 2206 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32130 IWS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.4 x 10-11 1755 339 83.81% 2094 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32130 IWS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.3163 x 10-2 435 272 192 646 61.53% 77.09% 707 838 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-28'
Avg. expression score for this sample: '1370.72'
Avg. expression score in LCM sample: '343.108'
Tissue used: 'pure endosperm, no chalazal'
AT1G32120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.5976 x 10-2 72 34 26 107 67.92% 80.45% 106 133 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.077121'
Avg. expression score for this sample: '77.7197'
Avg. expression score in LCM sample: '23.6783'
Tissue used: 'pure endosperm, no chalazal'
AT1G32120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.99476 x 10-1 268 91 74.65% 359 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.26 x 10-4 56 6 90.32% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.90163 x 10-1 107 86 34 164 55.44% 82.83% 193 198 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.077121'
Avg. expression score for this sample: '97.165'
Avg. expression score in LCM sample: '23.6783'
Tissue used: 'full endosperm'
AT1G32120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.469 x 10-3 332 195 63.00% 527 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 149 158 73 80 48.53% 52.29% 307 153 TAIR8 Avg. embryo expression (dissected): '162.857'
Avg. embryo expression (LCM): '101.838'
AT1G32100 PRR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G32100 PRR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32100 PRR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32100 PRR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G32100 PRR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.3493'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G32100 PRR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '109.336'
Avg. expression score in LCM sample: '65.9495'
Tissue used: 'full endosperm'
AT1G32090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '207.358'
Avg. embryo expression (LCM): '153.805'
AT1G32090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '63.7422'
Avg. expression score in LCM sample: '65.9495'
Tissue used: 'pure endosperm, no chalazal'
AT1G32090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32080 LrgB endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32080 LrgB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.02896'
Avg. expression score in LCM sample: '6.51118'
Tissue used: 'pure endosperm, no chalazal'
AT1G32080 LrgB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.97038'
Avg. expression score in LCM sample: '6.51118'
Tissue used: 'full endosperm'
AT1G32080 LrgB endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32080 LrgB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '30.3297'
Avg. embryo expression (LCM): '18.0844'
AT1G32080 LrgB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32070 NSI endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7717 x 10-1 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32070 NSI embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 5 0 3 44.44% 100.00% 9 3 TAIR8 Avg. embryo expression (dissected): '133.423'
Avg. embryo expression (LCM): '125.724'
AT1G32070 NSI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.407547'
Avg. expression score for this sample: '56.2666'
Avg. expression score in LCM sample: '27.4851'
Tissue used: 'pure endosperm, no chalazal'
AT1G32070 NSI endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.74992 x 10-1 31 7 81.58% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32070 NSI endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.61194 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32070 NSI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84447 x 10-1 11 2 4 14 84.62% 77.78% 13 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.407547'
Avg. expression score for this sample: '68.2052'
Avg. expression score in LCM sample: '27.4851'
Tissue used: 'full endosperm'
AT1G32060 PRK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8877 x 10-2 2114 1301 919 1950 61.90% 67.97% 3415 2869 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000342'
Avg. expression score for this sample: '1769.29'
Avg. expression score in LCM sample: '1306.81'
Tissue used: 'full endosperm'
AT1G32060 PRK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.703 x 10-2 409 194 67.83% 603 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32060 PRK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.01972 x 10-1 1955 2328 724 918 45.65% 55.91% 4283 1642 TAIR8 Avg. embryo expression (dissected): '3104.4'
Avg. embryo expression (LCM): '1621.85'
AT1G32060 PRK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.69299 x 10-1 369 190 66.01% 559 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32060 PRK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.56979 x 10-1 198 112 63.87% 310 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32060 PRK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.297 x 10-3 2137 1162 801 1378 64.78% 63.24% 3299 2179 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000342'
Avg. expression score for this sample: '1802.73'
Avg. expression score in LCM sample: '1306.81'
Tissue used: 'pure endosperm, no chalazal'
AT1G32050 SCAMP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.4504 x 10-2 566 294 288 744 65.81% 72.09% 860 1032 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-25'
Avg. expression score for this sample: '525.8'
Avg. expression score in LCM sample: '149.199'
Tissue used: 'pure endosperm, no chalazal'
AT1G32050 SCAMP5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 951 55 94.53% 1006 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32050 SCAMP5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2677 x 10-1 370 107 77.57% 477 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32050 SCAMP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0 x 10-30 1585 532 470 1869 74.87% 79.91% 2117 2339 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-25'
Avg. expression score for this sample: '773.401'
Avg. expression score in LCM sample: '149.199'
Tissue used: 'full endosperm'
AT1G32050 SCAMP5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1041 57 94.81% 1098 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G32050 SCAMP5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.65263 x 10-1 251 304 25 45 45.23% 64.29% 555 70 TAIR8 Avg. embryo expression (dissected): '254.095'
Avg. embryo expression (LCM): '317.694'