Displaying data sets 14801 - 14900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G45600 GAS41 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.14188 x 10-1 35 9 79.55% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45600 GAS41 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 24 11 68.57% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.76471 x 10-1 3 0 1 5 100.00% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.438433'
Avg. expression score for this sample: '20.9131'
Avg. expression score in LCM sample: '7.65761'
Tissue used: 'pure endosperm, no chalazal'
AT5G45590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 1 4 66.67% 80.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.438433'
Avg. expression score for this sample: '19.5974'
Avg. expression score in LCM sample: '7.65761'
Tissue used: 'full endosperm'
AT5G45590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 1 1 0.00% 50.00% 2 2 TAIR8 Avg. embryo expression (dissected): '38.9273'
Avg. embryo expression (LCM): '22.8943'
AT5G45590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.78552 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.88018 x 10-1 12 5 70.59% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.21694'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G45580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45573 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.77331'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45573 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45573 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 7.6923 x 10-2 0 7 0 0 0.00% 7 0 TAIR8 Avg. embryo expression (dissected): '2.48989'
Avg. embryo expression (LCM): '0'
AT5G45573 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.85714 x 10-1 1 18 5.26% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45573 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45573 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.15151'
Avg. expression score in LCM sample: '.529125'
Tissue used: 'pure endosperm, no chalazal'
AT5G45570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.12528'
Avg. expression score in LCM sample: '.529125'
Tissue used: 'full endosperm'
AT5G45570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.18451'
Avg. embryo expression (LCM): '0'
AT5G45570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.11111 x 10-1 0 8 0.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.71911 x 10-1 17 11 13 20 60.71% 60.61% 28 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.239241'
Avg. expression score for this sample: '25.0778'
Avg. expression score in LCM sample: '36.7742'
Tissue used: 'pure endosperm, no chalazal'
AT5G45560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3129 x 10-2 38 8 14 48 82.61% 77.42% 46 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.239241'
Avg. expression score for this sample: '30.4825'
Avg. expression score in LCM sample: '36.7742'
Tissue used: 'full endosperm'
AT5G45560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.73246 x 10-1 20 13 7 5 60.61% 41.67% 33 12 TAIR8 Avg. embryo expression (dissected): '37.4431'
Avg. embryo expression (LCM): '18.9509'
AT5G45560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.20923 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.0909 x 10-2 21 2 91.30% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-7 76 1 98.70% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45550 MOB1-like endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.86439 x 10-1 15 15 5 36 50.00% 87.80% 30 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025128'
Avg. expression score for this sample: '54.0306'
Avg. expression score in LCM sample: '89.3339'
Tissue used: 'pure endosperm, no chalazal'
AT5G45550 MOB1-like endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1305 x 10-2 48 23 39 145 67.61% 78.80% 71 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025128'
Avg. expression score for this sample: '173.027'
Avg. expression score in LCM sample: '89.3339'
Tissue used: 'full endosperm'
AT5G45550 MOB1-like embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 7 1 3 30.00% 75.00% 10 4 TAIR8 Avg. embryo expression (dissected): '27.157'
Avg. embryo expression (LCM): '43.0885'
AT5G45550 MOB1-like endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.3934 x 10-2 45 6 88.24% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45550 MOB1-like endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.31 x 10-4 347 59 85.47% 406 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45550 MOB1-like endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2579 x 10-2 274 56 83.03% 330 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.485318'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'pure endosperm, no chalazal'
AT5G45540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.26101'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'full endosperm'
AT5G45540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G45540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '.209318'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 4 0 0 3 100.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '.573888'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.303851'
Avg. embryo expression (LCM): '0'
AT5G45530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6667 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.05261 x 10-1 16 21 20 43 43.24% 68.25% 37 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08307'
Avg. expression score for this sample: '8.57276'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.61194 x 10-1 39 41 24 53 48.75% 68.83% 80 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08307'
Avg. expression score for this sample: '10.9296'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G45520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.0655 x 10-2 25 65 11 21 27.78% 65.62% 90 32 TAIR8 Avg. embryo expression (dissected): '18.2547'
Avg. embryo expression (LCM): '11.1143'
AT5G45520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.72765 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.56 x 10-4 26 48 35.14% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2568 x 10-2 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.5827 x 10-1 22 10 3 27 68.75% 90.00% 32 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.4e-15'
Avg. expression score for this sample: '19.1185'
Avg. expression score in LCM sample: '1.76375'
Tissue used: 'pure endosperm, no chalazal'
AT5G45510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3 x 10-15 167 18 27 202 90.27% 88.21% 185 229 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.4e-15'
Avg. expression score for this sample: '63.725'
Avg. expression score in LCM sample: '1.76375'
Tissue used: 'full endosperm'
AT5G45510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2954 x 10-1 47 86 14 24 35.34% 63.16% 133 38 TAIR8 Avg. embryo expression (dissected): '64.4562'
Avg. embryo expression (LCM): '42.3475'
AT5G45510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.92 x 10-4 66 0 100.00% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4371 x 10-2 213 15 93.42% 228 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-8 617 23 96.41% 640 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.82043 x 10-1 9 0 1 0 100.00% 0.00% 9 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.163711'
Avg. expression score for this sample: '9.38315'
Avg. expression score in LCM sample: '1.11704'
Tissue used: 'pure endosperm, no chalazal'
AT5G45500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.07283 x 10-1 30 1 7 1 96.77% 12.50% 31 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.163711'
Avg. expression score for this sample: '15.0423'
Avg. expression score in LCM sample: '1.11704'
Tissue used: 'full endosperm'
AT5G45500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.35095 x 10-1 17 2 4 0 89.47% 0.00% 19 4 TAIR8 Avg. embryo expression (dissected): '41.0784'
Avg. embryo expression (LCM): '24.9539'
AT5G45500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.64072 x 10-1 21 7 75.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6464 x 10-2 67 3 95.71% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 33 2 16 0 94.29% 0.00% 35 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.079467'
Avg. expression score for this sample: '25.8897'
Avg. expression score in LCM sample: '5.27655'
Tissue used: 'pure endosperm, no chalazal'
AT5G45490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7746 x 10-2 64 1 18 20 98.46% 52.63% 65 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.079467'
Avg. expression score for this sample: '36.0994'
Avg. expression score in LCM sample: '5.27655'
Tissue used: 'full endosperm'
AT5G45490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.8 x 10-5 88 0 27 1 100.00% 3.57% 88 28 TAIR8 Avg. embryo expression (dissected): '69.07'
Avg. embryo expression (LCM): '37.839'
AT5G45490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.45161 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.29331 x 10-1 9 7 56.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.07085 x 10-1 24 3 88.89% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.6628 x 10-2 259 21 110 85 92.50% 43.59% 280 195 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000297'
Avg. expression score for this sample: '69.6189'
Avg. expression score in LCM sample: '29.0431'
Tissue used: 'pure endosperm, no chalazal'
AT5G45480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.834 x 10-3 431 44 142 106 90.74% 42.74% 475 248 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000297'
Avg. expression score for this sample: '76.3214'
Avg. expression score in LCM sample: '29.0431'
Tissue used: 'full endosperm'
AT5G45480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.1 x 10-7 320 60 116 18 84.21% 13.43% 380 134 TAIR8 Avg. embryo expression (dissected): '118.106'
Avg. embryo expression (LCM): '66.033'
AT5G45480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2 x 10-6 33 39 45.83% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2 x 10-17 144 160 47.37% 304 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 636 17 97.40% 653 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.28344 x 10-1 53 19 38 35 73.61% 47.95% 72 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.679008'
Avg. expression score for this sample: '57.3709'
Avg. expression score in LCM sample: '49.0469'
Tissue used: 'pure endosperm, no chalazal'
AT5G45470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.21763 x 10-1 68 18 39 54 79.07% 58.06% 86 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.679008'
Avg. expression score for this sample: '53.6977'
Avg. expression score in LCM sample: '49.0469'
Tissue used: 'full endosperm'
AT5G45470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4765 x 10-2 84 31 23 14 73.04% 37.84% 115 37 TAIR8 Avg. embryo expression (dissected): '106.053'
Avg. embryo expression (LCM): '75.5901'
AT5G45470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0091 x 10-2 24 3 88.89% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 36 19 65.45% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2 x 10-17 149 5 96.75% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45469 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.2395'
Avg. expression score in LCM sample: '6.74634'
Tissue used: 'pure endosperm, no chalazal'
AT5G45469 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '59.5099'
Avg. expression score in LCM sample: '6.74634'
Tissue used: 'full endosperm'
AT5G45469 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.8202'
Avg. embryo expression (LCM): '34.5612'
AT5G45469 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45469 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45469 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.25232 x 10-1 72 9 34 44 88.89% 56.41% 81 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0241'
Avg. expression score for this sample: '22.5261'
Avg. expression score in LCM sample: '10.2591'
Tissue used: 'pure endosperm, no chalazal'
AT5G45460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.3832 x 10-2 134 12 40 26 91.78% 39.39% 146 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0241'
Avg. expression score for this sample: '21.68'
Avg. expression score in LCM sample: '10.2591'
Tissue used: 'full endosperm'
AT5G45460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.45317 x 10-1 43 17 22 3 71.67% 12.00% 60 25 TAIR8 Avg. embryo expression (dissected): '21.9744'
Avg. embryo expression (LCM): '9.19288'
AT5G45460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.6507 x 10-2 9 8 52.94% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.56958 x 10-1 36 8 81.82% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-12 106 0 100.00% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G45450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.19604'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G45450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.92723'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'