Displaying data sets 148401 - 148500 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G34280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.51404'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G34280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.07286'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G34280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '105.863'
Avg. embryo expression (LCM): '61.9766'
AT1G34270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '148.377'
Avg. expression score in LCM sample: '31.7328'
Tissue used: 'pure endosperm, no chalazal'
AT1G34270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '230.496'
Avg. expression score in LCM sample: '31.7328'
Tissue used: 'full endosperm'
AT1G34260 FAB1D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.1 x 10-6 215 81 114 430 72.64% 79.04% 296 544 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000027'
Avg. expression score for this sample: '228.857'
Avg. expression score in LCM sample: '309.568'
Tissue used: 'full endosperm'
AT1G34260 FAB1D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.63955 x 10-1 74 30 42 81 71.15% 65.85% 104 123 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000027'
Avg. expression score for this sample: '214.847'
Avg. expression score in LCM sample: '309.568'
Tissue used: 'pure endosperm, no chalazal'
AT1G34260 FAB1D endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.097 x 10-3 422 93 81.94% 515 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34260 FAB1D endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.206 x 10-3 53 4 92.98% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34260 FAB1D embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.81251 x 10-1 9 14 1 2 39.13% 66.67% 23 3 TAIR8 Avg. embryo expression (dissected): '48.3396'
Avg. embryo expression (LCM): '31.5974'
AT1G34260 FAB1D endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.65164 x 10-1 504 172 74.56% 676 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34245 EPF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34245 EPF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.69925'
Avg. embryo expression (LCM): '0'
AT1G34245 EPF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34245 EPF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.2'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G34245 EPF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.1506'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G34245 EPF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.8899 x 10-2 41 6 87.23% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.53007 x 10-1 14 21 13 7 40.00% 35.00% 35 20 TAIR8 Avg. embryo expression (dissected): '44.086'
Avg. embryo expression (LCM): '35.164'
AT1G34220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4617 x 10-2 444 194 69.59% 638 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.66 x 10-4 108 23 32 115 82.44% 78.23% 131 147 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003565'
Avg. expression score for this sample: '85.7354'
Avg. expression score in LCM sample: '36.6419'
Tissue used: 'full endosperm'
AT1G34220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 43 23 22 51 65.15% 69.86% 66 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003565'
Avg. expression score for this sample: '66.9667'
Avg. expression score in LCM sample: '36.6419'
Tissue used: 'pure endosperm, no chalazal'
AT1G34220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.02451 x 10-1 384 129 74.85% 513 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34210 SERK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-8 125 21 85.62% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34210 SERK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 117 48 43 64 70.91% 59.81% 165 107 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.22845'
Avg. expression score for this sample: '35.3473'
Avg. expression score in LCM sample: '47.6506'
Tissue used: 'pure endosperm, no chalazal'
AT1G34210 SERK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2022 x 10-1 108 38 116 134 73.97% 53.60% 146 250 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.22845'
Avg. expression score for this sample: '30.2631'
Avg. expression score in LCM sample: '47.6506'
Tissue used: 'full endosperm'
AT1G34210 SERK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2783 x 10-2 6 11 35.29% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34210 SERK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.5 x 10-6 20 42 32.26% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34210 SERK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 81 93 26 39 46.55% 60.00% 174 65 TAIR8 Avg. embryo expression (dissected): '37.551'
Avg. embryo expression (LCM): '49.4682'
AT1G34200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.31282 x 10-1 30 36 10 5 45.45% 33.33% 66 15 TAIR8 Avg. embryo expression (dissected): '52.9464'
Avg. embryo expression (LCM): '58.95'
AT1G34200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.53 x 10-4 28 3 90.32% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.49752 x 10-1 34 19 34 37 64.15% 52.11% 53 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.256571'
Avg. expression score for this sample: '35.5933'
Avg. expression score in LCM sample: '11.8024'
Tissue used: 'full endosperm'
AT1G34200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 5 9 13 76.19% 59.09% 21 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.256571'
Avg. expression score for this sample: '20.0719'
Avg. expression score in LCM sample: '11.8024'
Tissue used: 'pure endosperm, no chalazal'
AT1G34200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-5 79 14 84.95% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.2949 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34190 NAC017 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34190 NAC017 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34190 NAC017 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '237.771'
Avg. embryo expression (LCM): '159.293'
AT1G34190 NAC017 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34190 NAC017 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '289.882'
Avg. expression score in LCM sample: '251.952'
Tissue used: 'pure endosperm, no chalazal'
AT1G34190 NAC017 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '481.153'
Avg. expression score in LCM sample: '251.952'
Tissue used: 'full endosperm'
AT1G34180 NAC016 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 6.7 x 10-5 9 0 10 79 100.00% 88.76% 9 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000071'
Avg. expression score for this sample: '22.0981'
Avg. expression score in LCM sample: '14.5803'
Tissue used: 'full endosperm'
AT1G34180 NAC016 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 3.52023 x 10-1 2 0 5 20 100.00% 80.00% 2 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000071'
Avg. expression score for this sample: '8.62518'
Avg. expression score in LCM sample: '14.5803'
Tissue used: 'pure endosperm, no chalazal'
AT1G34180 NAC016 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.07 x 10-3 111 44 71.61% 155 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G34180 NAC016 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.93497 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G34180 NAC016 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 0 1 0 4 0.00% 100.00% 1 4 TAIR8 Avg. embryo expression (dissected): '3.3049'
Avg. embryo expression (LCM): '0'
AT1G34180 NAC016 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.0355 x 10-2 202 49 80.48% 251 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G34170 ARF13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 35 11 76.09% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34170 ARF13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G34170 ARF13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 6 60.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34170 ARF13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G34170 ARF13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G34170 ARF13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 16 4 80.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1168 x 10-2 333 223 74 60 59.89% 44.78% 556 134 TAIR8 Avg. embryo expression (dissected): '133.725'
Avg. embryo expression (LCM): '94.5284'
AT1G34160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-6 197 123 61.56% 320 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.476 x 10-3 168 15 57 77 91.80% 57.46% 183 134 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000098'
Avg. expression score for this sample: '41.7972'
Avg. expression score in LCM sample: '13.1693'
Tissue used: 'full endosperm'
AT1G34160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.08 x 10-3 200 43 53 93 82.30% 63.70% 243 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000098'
Avg. expression score for this sample: '56.9434'
Avg. expression score in LCM sample: '13.1693'
Tissue used: 'pure endosperm, no chalazal'
AT1G34160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-16 558 44 92.69% 602 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.40225 x 10-1 14 2 87.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.46965'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'pure endosperm, no chalazal'
AT1G34150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 2 3 75.00% 60.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.6922'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'full endosperm'
AT1G34150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.8042 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '19.227'
Avg. embryo expression (LCM): '17.5192'
AT1G34140 PAB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G34140 PAB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34140 PAB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.02564 x 10-1 1 6 0 0 14.29% 7 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.669921'
Avg. expression score for this sample: '1.77816'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G34140 PAB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.669921'
Avg. expression score for this sample: '1.26672'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G34140 PAB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34140 PAB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34130 STT3B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.718 x 10-3 66 9 88.00% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34130 STT3B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.79192 x 10-1 715 284 71.57% 999 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34130 STT3B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.21578 x 10-1 79 131 35 65 37.62% 65.00% 210 100 TAIR8 Avg. embryo expression (dissected): '722.657'
Avg. embryo expression (LCM): '459.895'
AT1G34130 STT3B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-12 480 64 88.24% 544 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34130 STT3B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.9338 83 64 43 138 56.46% 76.24% 147 181 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002735'
Avg. expression score for this sample: '575.159'
Avg. expression score in LCM sample: '539.414'
Tissue used: 'pure endosperm, no chalazal'
AT1G34130 STT3B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.55 x 10-4 133 65 85 342 67.17% 80.09% 198 427 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002735'
Avg. expression score for this sample: '564.332'
Avg. expression score in LCM sample: '539.414'
Tissue used: 'full endosperm'
AT1G34120 IP5PI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 4 1 7 55.56% 87.50% 9 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '82.3784'
Avg. expression score in LCM sample: '30.8509'
Tissue used: 'full endosperm'
AT1G34120 IP5PI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 1 1 50.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '52.1482'
Avg. expression score in LCM sample: '30.8509'
Tissue used: 'pure endosperm, no chalazal'
AT1G34120 IP5PI endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.62 x 10-3 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34120 IP5PI endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34120 IP5PI embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 3 0 0 25.00% 4 0 TAIR8 Avg. embryo expression (dissected): '77.0117'
Avg. embryo expression (LCM): '33.4435'
AT1G34120 IP5PI endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.59624 x 10-1 5 8 38.46% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.0111 x 10-2 28 6 82.35% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.36531 x 10-1 9 12 8 6 42.86% 42.86% 21 14 TAIR8 Avg. embryo expression (dissected): '222.274'
Avg. embryo expression (LCM): '110.289'
AT1G34110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-6 56 3 94.92% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 23 4 17 17 85.19% 50.00% 27 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.911495'
Avg. expression score for this sample: '193.733'
Avg. expression score in LCM sample: '69.2272'
Tissue used: 'pure endosperm, no chalazal'
AT1G34110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 42 10 31 37 80.77% 54.41% 52 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.911495'
Avg. expression score for this sample: '196.158'
Avg. expression score in LCM sample: '69.2272'
Tissue used: 'full endosperm'
AT1G34110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.51959 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34095 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34095 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.89761'
Avg. embryo expression (LCM): '0'
AT1G34095 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G34095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G34095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.8427'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G34095 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'