Displaying data sets 146101 - 146200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G47317 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 359 0 100.00% 359 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47317 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 10 1338 0.74% 1348 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47317 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 3 0 281 1 100.00% 0.35% 3 282 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-16'
Avg. expression score for this sample: '167.801'
Avg. expression score in LCM sample: '388.789'
Tissue used: 'full endosperm'
AT1G47317 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.929 x 10-3 1357 3 819 1 99.78% 0.12% 1360 820 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-16'
Avg. expression score for this sample: '1839.79'
Avg. expression score in LCM sample: '388.789'
Tissue used: 'pure endosperm, no chalazal'
AT1G47317 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47317 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.773 x 10-3 56 1 20 0 98.25% 0.00% 57 20 TAIR8 Avg. embryo expression (dissected): '102.346'
Avg. embryo expression (LCM): '0'
AT1G47310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 5 4 3 54.55% 42.86% 11 7 TAIR8 Avg. embryo expression (dissected): '140.355'
Avg. embryo expression (LCM): '88.2491'
AT1G47310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.51829 x 10-1 8 5 61.54% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.97226 x 10-1 16 6 4 9 72.73% 69.23% 22 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.337501'
Avg. expression score for this sample: '280.717'
Avg. expression score in LCM sample: '151.095'
Tissue used: 'pure endosperm, no chalazal'
AT1G47310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2 x 10-7 60 0 100.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.33968 x 10-1 36 7 17 32 83.72% 65.31% 43 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.337501'
Avg. expression score for this sample: '279.901'
Avg. expression score in LCM sample: '151.095'
Tissue used: 'full endosperm'
AT1G47310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.92998 x 10-1 31 7 81.58% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.25 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.39812'
Avg. expression score in LCM sample: '1.60207'
Tissue used: 'pure endosperm, no chalazal'
AT1G47300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.36608'
Avg. expression score in LCM sample: '1.60207'
Tissue used: 'full endosperm'
AT1G47300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.6332'
Avg. embryo expression (LCM): '0'
AT1G47290 3BETAHSD/D1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 5 9 3 4 35.71% 57.14% 14 7 TAIR8 Avg. embryo expression (dissected): '138.899'
Avg. embryo expression (LCM): '138.973'
AT1G47290 3BETAHSD/D1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.9669 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47290 3BETAHSD/D1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.08884 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47290 3BETAHSD/D1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.49338 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47290 3BETAHSD/D1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 4 0 7 55.56% 100.00% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.851898'
Avg. expression score for this sample: '102.27'
Avg. expression score in LCM sample: '95.2131'
Tissue used: 'full endosperm'
AT1G47290 3BETAHSD/D1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69906 x 10-1 9 14 5 19 39.13% 79.17% 23 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.851898'
Avg. expression score for this sample: '83.1346'
Avg. expression score in LCM sample: '95.2131'
Tissue used: 'pure endosperm, no chalazal'
AT1G47280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.64034'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G47280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G47278 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 15 3 8 42.31% 72.73% 26 11 TAIR8 Avg. embryo expression (dissected): '213.335'
Avg. embryo expression (LCM): '230.274'
AT1G47278 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.34345 x 10-1 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47278 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.9898 x 10-2 105 11 90.52% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47278 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.8379 x 10-1 10 8 3 23 55.56% 88.46% 18 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000445'
Avg. expression score for this sample: '167.242'
Avg. expression score in LCM sample: '38.9054'
Tissue used: 'pure endosperm, no chalazal'
AT1G47278 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.12 x 10-4 39 22 4 97 63.93% 96.04% 61 101 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000445'
Avg. expression score for this sample: '231.231'
Avg. expression score in LCM sample: '38.9054'
Tissue used: 'full endosperm'
AT1G47278 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.9122 x 10-2 47 19 71.21% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47271 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47271 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47271 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.34781'
Avg. expression score in LCM sample: '9.48015'
Tissue used: 'full endosperm'
AT1G47271 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.66748'
Avg. expression score in LCM sample: '9.48015'
Tissue used: 'pure endosperm, no chalazal'
AT1G47271 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47271 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.2007'
Avg. embryo expression (LCM): '0'
AT1G47270 TLP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 22 20 9 8 52.38% 47.06% 42 17 TAIR8 Avg. embryo expression (dissected): '35.0529'
Avg. embryo expression (LCM): '27.0386'
AT1G47270 TLP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.58348 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47270 TLP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.38537 x 10-1 49 12 15 22 80.33% 59.46% 61 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.459103'
Avg. expression score for this sample: '39.5067'
Avg. expression score in LCM sample: '73.8423'
Tissue used: 'pure endosperm, no chalazal'
AT1G47270 TLP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.04737 x 10-1 97 42 69.78% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47270 TLP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.73154 x 10-1 37 9 25 39 80.43% 60.94% 46 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.459103'
Avg. expression score for this sample: '25.4561'
Avg. expression score in LCM sample: '73.8423'
Tissue used: 'full endosperm'
AT1G47270 TLP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.09309 x 10-1 103 30 77.44% 133 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47265 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47265 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47265 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 0 1 75.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.19715'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G47265 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47265 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5112 x 10-2 3 13 18.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47265 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '.489581'
Avg. embryo expression (LCM): '0'
AT1G47260 GAMMA CA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.6767 x 10-2 499 416 97 106 54.54% 52.22% 915 203 TAIR8 Avg. embryo expression (dissected): '985.897'
Avg. embryo expression (LCM): '831.202'
AT1G47260 GAMMA CA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2027 x 10-2 110 26 80.88% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47260 GAMMA CA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1495 194 88.51% 1689 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47260 GAMMA CA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.51507 x 10-1 1340 487 73.34% 1827 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47260 GAMMA CA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.4 x 10-6 299 81 182 511 78.68% 73.74% 380 693 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001286'
Avg. expression score for this sample: '419.427'
Avg. expression score in LCM sample: '296.457'
Tissue used: 'full endosperm'
AT1G47260 GAMMA CA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.13562 x 10-1 282 135 122 222 67.63% 64.53% 417 344 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001286'
Avg. expression score for this sample: '500.15'
Avg. expression score in LCM sample: '296.457'
Tissue used: 'pure endosperm, no chalazal'
AT1G47250 PAF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.7524 x 10-2 236 55 100 160 81.10% 61.54% 291 260 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.096204'
Avg. expression score for this sample: '110.124'
Avg. expression score in LCM sample: '44.8433'
Tissue used: 'pure endosperm, no chalazal'
AT1G47250 PAF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-21 304 17 94.70% 321 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47250 PAF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.50492 x 10-1 125 10 72 49 92.59% 40.50% 135 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.096204'
Avg. expression score for this sample: '74.5435'
Avg. expression score in LCM sample: '44.8433'
Tissue used: 'full endosperm'
AT1G47250 PAF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.0 x 10-15 115 149 43.56% 264 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47250 PAF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.36042 x 10-1 36 9 80.00% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47250 PAF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.9 x 10-6 274 111 55 29 71.17% 34.52% 385 84 TAIR8 Avg. embryo expression (dissected): '154.242'
Avg. embryo expression (LCM): '135.281'
AT1G47240 NRAMP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '74.4115'
Avg. embryo expression (LCM): '41.2549'
AT1G47240 NRAMP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47240 NRAMP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47240 NRAMP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '123.821'
Avg. expression score in LCM sample: '97.3149'
Tissue used: 'pure endosperm, no chalazal'
AT1G47240 NRAMP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '213.226'
Avg. expression score in LCM sample: '97.3149'
Tissue used: 'full endosperm'
AT1G47240 NRAMP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47230 CYCA3;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 2 3 3 77.78% 50.00% 9 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177543'
Avg. expression score for this sample: '87.2907'
Avg. expression score in LCM sample: '124.859'
Tissue used: 'pure endosperm, no chalazal'
AT1G47230 CYCA3;4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.88097 x 10-1 39 14 73.58% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47230 CYCA3;4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.079 x 10-3 12 13 48.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47230 CYCA3;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.4232 x 10-2 15 1 4 16 93.75% 80.00% 16 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177543'
Avg. expression score for this sample: '81.9952'
Avg. expression score in LCM sample: '124.859'
Tissue used: 'full endosperm'
AT1G47230 CYCA3;4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47230 CYCA3;4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.08285 x 10-1 14 12 7 1 53.85% 12.50% 26 8 TAIR8 Avg. embryo expression (dissected): '137.318'
Avg. embryo expression (LCM): '244.327'
AT1G47220 CYCA3;3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G47220 CYCA3;3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47220 CYCA3;3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G47220 CYCA3;3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47220 CYCA3;3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47220 CYCA3;3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47210 CYCA3;2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-5 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47210 CYCA3;2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 11 0.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47210 CYCA3;2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.423 x 10-3 1 0 11 0 100.00% 0.00% 1 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009423'
Avg. expression score for this sample: '18.9962'
Avg. expression score in LCM sample: '32.6882'
Tissue used: 'full endosperm'
AT1G47210 CYCA3;2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009423'
Avg. expression score for this sample: '18.47'
Avg. expression score in LCM sample: '32.6882'
Tissue used: 'pure endosperm, no chalazal'
AT1G47210 CYCA3;2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47210 CYCA3;2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '50.5627'
Avg. embryo expression (LCM): '99.489'
AT1G47200 WPP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1 x 10-9 595 1023 72 132 36.77% 64.71% 1618 204 TAIR8 Avg. embryo expression (dissected): '1166.52'
Avg. embryo expression (LCM): '1565.83'
AT1G47200 WPP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1537 x 10-2 445 125 78.07% 570 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47200 WPP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0852 570 469 202 935 54.86% 82.23% 1039 1137 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-16'
Avg. expression score for this sample: '1068.67'
Avg. expression score in LCM sample: '542.294'
Tissue used: 'pure endosperm, no chalazal'
AT1G47200 WPP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.6 x 10-26 1372 235 85.38% 1607 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47200 WPP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.7 x 10-13 857 170 83.45% 1027 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47200 WPP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9 x 10-19 1019 557 549 2339 64.66% 80.99% 1576 2888 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-16'
Avg. expression score for this sample: '1250.9'
Avg. expression score in LCM sample: '542.294'
Tissue used: 'full endosperm'
AT1G47128 RD21A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 189 0 3 141 100.00% 97.92% 189 144 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '211.047'
Avg. expression score in LCM sample: '10.8618'
Tissue used: 'full endosperm'
AT1G47128 RD21A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-9 350 34 91.15% 384 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47128 RD21A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9 x 10-18 146 0 1 21 100.00% 95.45% 146 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '97.6555'
Avg. expression score in LCM sample: '10.8618'
Tissue used: 'pure endosperm, no chalazal'
AT1G47128 RD21A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.82081 x 10-1 1503 7 99.54% 1510 TAIR8 Mutant effect: 'N/A (not a MEG)'