Displaying data sets 145901 - 146000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G47680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.816606'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.6744'
Avg. expression score in LCM sample: '23.1933'
Tissue used: 'full endosperm'
AT1G47670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.2779'
Avg. expression score in LCM sample: '23.1933'
Tissue used: 'pure endosperm, no chalazal'
AT1G47670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '131.092'
Avg. embryo expression (LCM): '245.646'
AT1G47670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.315763'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.125 1 14 6.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.219306'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G47660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.351904'
Avg. embryo expression (LCM): '0'
AT1G47660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47655 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47655 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28656 x 10-1 16 6 5 2 72.73% 28.57% 22 7 TAIR8 Avg. embryo expression (dissected): '167.072'
Avg. embryo expression (LCM): '173.497'
AT1G47655 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.48824 x 10-1 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47655 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.3614 24 1 26 13 96.00% 33.33% 25 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.722041'
Avg. expression score for this sample: '75.0758'
Avg. expression score in LCM sample: '134.324'
Tissue used: 'full endosperm'
AT1G47655 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.73701 x 10-1 55 14 14 8 79.71% 36.36% 69 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.722041'
Avg. expression score for this sample: '210.061'
Avg. expression score in LCM sample: '134.324'
Tissue used: 'pure endosperm, no chalazal'
AT1G47655 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.91629 x 10-1 58 33 63.74% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.406 x 10-2 266 57 138 245 82.35% 63.97% 323 383 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.174514'
Avg. expression score for this sample: '220.498'
Avg. expression score in LCM sample: '206.711'
Tissue used: 'full endosperm'
AT1G47640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.07481 x 10-1 210 108 89 163 66.04% 64.68% 318 252 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.174514'
Avg. expression score for this sample: '261.473'
Avg. expression score in LCM sample: '206.711'
Tissue used: 'pure endosperm, no chalazal'
AT1G47640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.696 x 10-2 256 178 77 82 58.99% 51.57% 434 159 TAIR8 Avg. embryo expression (dissected): '403.996'
Avg. embryo expression (LCM): '317.92'
AT1G47640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.194 x 10-3 651 379 63.20% 1030 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 867 84 91.17% 951 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47620 CYP96A8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 65 4 94.20% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47620 CYP96A8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 4.44444 x 10-1 5 0 0 0 100.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '1.16552'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47620 CYP96A8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47620 CYP96A8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '.40336'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G47620 CYP96A8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47620 CYP96A8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G47610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.8865'
Avg. embryo expression (LCM): '0'
AT1G47610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-07'
Avg. expression score for this sample: '188.066'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 44 0 100.00% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7 x 10-7 56 0 0 3 100.00% 100.00% 56 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-07'
Avg. expression score for this sample: '574.024'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G47610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47603 PUP19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47603 PUP19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.153329'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G47603 PUP19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47603 PUP19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47603 PUP19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G47603 PUP19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47600 BGLU34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47600 BGLU34 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47600 BGLU34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G47600 BGLU34 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47600 BGLU34 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47600 BGLU34 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G47580 DYW1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.35902 x 10-1 6 9 4 2 40.00% 33.33% 15 6 TAIR8 Avg. embryo expression (dissected): '120.318'
Avg. embryo expression (LCM): '40.8154'
AT1G47580 DYW1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9573 x 10-2 2 7 22.22% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47580 DYW1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9003 x 10-1 8 9 47.06% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47580 DYW1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.77234 x 10-1 7 7 5 8 50.00% 61.54% 14 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.598184'
Avg. expression score for this sample: '73.492'
Avg. expression score in LCM sample: '16.6674'
Tissue used: 'pure endosperm, no chalazal'
AT1G47580 DYW1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.99782 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47580 DYW1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.67357 x 10-1 25 23 12 39 52.08% 76.47% 48 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.598184'
Avg. expression score for this sample: '127.151'
Avg. expression score in LCM sample: '16.6674'
Tissue used: 'full endosperm'
AT1G47570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.783 x 10-3 101 48 42 189 67.79% 81.82% 149 231 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.200103'
Avg. expression score for this sample: '73.1118'
Avg. expression score in LCM sample: '22.914'
Tissue used: 'full endosperm'
AT1G47570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.994 x 10-2 32 5 86.49% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.9 x 10-10 167 17 90.76% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.84668 x 10-1 107 104 18 36 50.71% 66.67% 211 54 TAIR8 Avg. embryo expression (dissected): '111.203'
Avg. embryo expression (LCM): '49.6064'
AT1G47570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.51203 x 10-1 102 71 63 128 58.96% 67.02% 173 191 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.200103'
Avg. expression score for this sample: '107.804'
Avg. expression score in LCM sample: '22.914'
Tissue used: 'pure endosperm, no chalazal'
AT1G47570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-5 142 23 86.06% 165 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47560 SEC3B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47560 SEC3B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.54645'
Avg. expression score in LCM sample: '4.45347'
Tissue used: 'pure endosperm, no chalazal'
AT1G47560 SEC3B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47560 SEC3B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12.8086'
Avg. expression score in LCM sample: '4.45347'
Tissue used: 'full endosperm'
AT1G47560 SEC3B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.9357'
Avg. embryo expression (LCM): '13.8019'
AT1G47560 SEC3B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47550 SEC3A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.71195 x 10-1 14 4 77.78% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47550 SEC3A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 7 6 4 58.82% 40.00% 17 10 TAIR8 Avg. embryo expression (dissected): '65.2214'
Avg. embryo expression (LCM): '47.1072'
AT1G47550 SEC3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.40644 x 10-1 6 4 7 3 60.00% 30.00% 10 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.84768'
Avg. expression score for this sample: '51.5094'
Avg. expression score in LCM sample: '49.5614'
Tissue used: 'pure endosperm, no chalazal'
AT1G47550 SEC3A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6606 x 10-2 25 4 86.21% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47550 SEC3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.06561 x 10-1 15 1 10 13 93.75% 56.52% 16 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.84768'
Avg. expression score for this sample: '84.0509'
Avg. expression score in LCM sample: '49.5614'
Tissue used: 'full endosperm'
AT1G47550 SEC3A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.4147 x 10-2 1 5 16.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17862.7'
Avg. expression score in LCM sample: '495.981'
Tissue used: 'full endosperm'
AT1G47540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12885.8'
Avg. embryo expression (LCM): '2405.77'
AT1G47540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12379.1'
Avg. expression score in LCM sample: '495.981'
Tissue used: 'pure endosperm, no chalazal'
AT1G47530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 571 169 216 197 77.16% 47.70% 740 413 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019745'
Avg. expression score for this sample: '234.378'
Avg. expression score in LCM sample: '79.1189'
Tissue used: 'pure endosperm, no chalazal'
AT1G47530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 754 59 92.74% 813 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.297 x 10-3 854 150 332 360 85.06% 52.02% 1004 692 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019745'
Avg. expression score for this sample: '301.719'
Avg. expression score in LCM sample: '79.1189'
Tissue used: 'full endosperm'
AT1G47530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.032 x 10-3 95 67 58.64% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-5 102 15 87.18% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.87 x 10-4 1467 1003 471 288 59.39% 37.94% 2470 759 TAIR8 Avg. embryo expression (dissected): '1017.02'
Avg. embryo expression (LCM): '765.219'
AT1G47510 5PTASE11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 2 0 50.00% 0.00% 2 2 TAIR8 Avg. embryo expression (dissected): '1.3908'
Avg. embryo expression (LCM): '0'
AT1G47510 5PTASE11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47510 5PTASE11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.45455 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47510 5PTASE11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.347392'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G47510 5PTASE11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47510 5PTASE11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.467818'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G47500 RBP47C' endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.05583 x 10-1 276 193 165 334 58.85% 66.93% 469 499 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.1e-06'
Avg. expression score for this sample: '214.677'
Avg. expression score in LCM sample: '123.756'
Tissue used: 'full endosperm'
AT1G47500 RBP47C' endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.46939 x 10-1 90 47 65.69% 137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47500 RBP47C' endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-26 834 227 78.61% 1061 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47500 RBP47C' embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.111 x 10-3 346 517 59 91 40.09% 60.67% 863 150 TAIR8 Avg. embryo expression (dissected): '501.715'
Avg. embryo expression (LCM): '606.78'
AT1G47500 RBP47C' endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.6 x 10-7 181 161 151 175 52.92% 53.68% 342 326 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.1e-06'
Avg. expression score for this sample: '236.532'
Avg. expression score in LCM sample: '123.756'
Tissue used: 'pure endosperm, no chalazal'
AT1G47500 RBP47C' endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2 x 10-22 200 364 35.46% 564 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47497 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G47497 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.228127'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'