Displaying data sets 145401 - 145500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G48460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 19 9 15 33 67.86% 68.75% 28 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '101.595'
Avg. expression score in LCM sample: '44.373'
Tissue used: 'full endosperm'
AT1G48460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 4 3 7 50.00% 70.00% 8 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '118.185'
Avg. expression score in LCM sample: '44.373'
Tissue used: 'pure endosperm, no chalazal'
AT1G48460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.72854 x 10-1 29 17 2 6 63.04% 75.00% 46 8 TAIR8 Avg. embryo expression (dissected): '337.697'
Avg. embryo expression (LCM): '334.372'
AT1G48450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.74383 x 10-1 571 490 93 67 53.82% 41.88% 1061 160 TAIR8 Avg. embryo expression (dissected): '733.262'
Avg. embryo expression (LCM): '832.558'
AT1G48450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-10 707 154 82.11% 861 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.38952 x 10-1 165 66 71.43% 231 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-10 713 155 82.14% 868 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.73716 x 10-1 318 149 121 211 68.09% 63.55% 467 332 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005231'
Avg. expression score for this sample: '344.386'
Avg. expression score in LCM sample: '163.529'
Tissue used: 'pure endosperm, no chalazal'
AT1G48450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-4 414 105 196 446 79.77% 69.47% 519 642 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005231'
Avg. expression score for this sample: '267.428'
Avg. expression score in LCM sample: '163.529'
Tissue used: 'full endosperm'
AT1G48440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 2 1 5 60.00% 83.33% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '337.871'
Avg. expression score in LCM sample: '254.671'
Tissue used: 'full endosperm'
AT1G48440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '537.644'
Avg. expression score in LCM sample: '254.671'
Tissue used: 'pure endosperm, no chalazal'
AT1G48440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '337.101'
Avg. embryo expression (LCM): '175.192'
AT1G48440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.22 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.85714 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.21 x 10-4 31 3 91.18% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.51 x 10-4 25 1 96.15% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.25566 x 10-1 31 16 65.96% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 23 18 17 48 56.10% 73.85% 41 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.270113'
Avg. expression score for this sample: '118.956'
Avg. expression score in LCM sample: '33.3202'
Tissue used: 'pure endosperm, no chalazal'
AT1G48430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.22611 x 10-1 32 55 9 55 36.78% 85.94% 87 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.270113'
Avg. expression score for this sample: '145.084'
Avg. expression score in LCM sample: '33.3202'
Tissue used: 'full endosperm'
AT1G48430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.6106 x 10-2 20 51 9 11 28.17% 55.00% 71 20 TAIR8 Avg. embryo expression (dissected): '177.877'
Avg. embryo expression (LCM): '61.0975'
AT1G48420 D-CDES embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80168 x 10-1 52 39 10 5 57.14% 33.33% 91 15 TAIR8 Avg. embryo expression (dissected): '96.013'
Avg. embryo expression (LCM): '77.1097'
AT1G48420 D-CDES endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.3 x 10-11 100 1 99.01% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48420 D-CDES endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.89598 x 10-1 14 4 77.78% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48420 D-CDES endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.47 x 10-4 53 4 92.98% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48420 D-CDES endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1523 x 10-2 83 24 18 65 77.57% 78.31% 107 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088339'
Avg. expression score for this sample: '154.909'
Avg. expression score in LCM sample: '23.6342'
Tissue used: 'full endosperm'
AT1G48420 D-CDES endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 41 23 23 51 64.06% 68.92% 64 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088339'
Avg. expression score for this sample: '91.0714'
Avg. expression score in LCM sample: '23.6342'
Tissue used: 'pure endosperm, no chalazal'
AT1G48410 AGO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 7 1 9 53.33% 90.00% 15 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-06'
Avg. expression score for this sample: '507.135'
Avg. expression score in LCM sample: '139.41'
Tissue used: 'pure endosperm, no chalazal'
AT1G48410 AGO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.0 x 10-7 60 21 15 153 74.07% 91.07% 81 168 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-06'
Avg. expression score for this sample: '459.176'
Avg. expression score in LCM sample: '139.41'
Tissue used: 'full endosperm'
AT1G48410 AGO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 8 1 4 38.46% 80.00% 13 5 TAIR8 Avg. embryo expression (dissected): '847.108'
Avg. embryo expression (LCM): '315.497'
AT1G48410 AGO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.18 x 10-4 243 16 93.82% 259 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48410 AGO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.53221 x 10-1 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48410 AGO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.168 x 10-2 205 20 91.11% 225 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48405 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48405 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48405 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '34.4852'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G48405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.96629'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G48405 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '24.9866'
Avg. embryo expression (LCM): '0'
AT1G48400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '176.065'
Avg. embryo expression (LCM): '100.368'
AT1G48400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '189.048'
Avg. expression score in LCM sample: '62.084'
Tissue used: 'pure endosperm, no chalazal'
AT1G48400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.037'
Avg. expression score in LCM sample: '62.084'
Tissue used: 'full endosperm'
AT1G48390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.5863'
Avg. expression score in LCM sample: '10.6707'
Tissue used: 'full endosperm'
AT1G48390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '19.7991'
Avg. expression score in LCM sample: '10.6707'
Tissue used: 'pure endosperm, no chalazal'
AT1G48390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.5434'
Avg. embryo expression (LCM): '15.2084'
AT1G48390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48380 RHL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48380 RHL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48380 RHL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48380 RHL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '51.506'
Avg. expression score in LCM sample: '35.8188'
Tissue used: 'pure endosperm, no chalazal'
AT1G48380 RHL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '125.046'
Avg. expression score in LCM sample: '35.8188'
Tissue used: 'full endosperm'
AT1G48380 RHL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '85.3061'
Avg. embryo expression (LCM): '155.827'
AT1G48370 YSL8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '36.5455'
Avg. embryo expression (LCM): '30.8941'
AT1G48370 YSL8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48370 YSL8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48370 YSL8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48370 YSL8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '31.5157'
Avg. expression score in LCM sample: '23.061'
Tissue used: 'full endosperm'
AT1G48370 YSL8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.236'
Avg. expression score in LCM sample: '23.061'
Tissue used: 'pure endosperm, no chalazal'
AT1G48360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '69.7612'
Avg. expression score in LCM sample: '15.5651'
Tissue used: 'pure endosperm, no chalazal'
AT1G48360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '42.4542'
Avg. expression score in LCM sample: '15.5651'
Tissue used: 'full endosperm'
AT1G48360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '103.933'
Avg. embryo expression (LCM): '62.0645'
AT1G48360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48350 EMB3105 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.25866 x 10-1 36 27 57.14% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48350 EMB3105 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.1975 x 10-2 66 59 52.80% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48350 EMB3105 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4 x 10-6 60 7 89.55% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48350 EMB3105 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.36547 x 10-1 98 84 82 169 53.85% 67.33% 182 251 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.033671'
Avg. expression score for this sample: '443.28'
Avg. expression score in LCM sample: '280.554'
Tissue used: 'full endosperm'
AT1G48350 EMB3105 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.1426 241 157 81 157 60.55% 65.97% 398 238 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.033671'
Avg. expression score for this sample: '846.374'
Avg. expression score in LCM sample: '280.554'
Tissue used: 'pure endosperm, no chalazal'
AT1G48350 EMB3105 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7084 x 10-2 482 605 143 149 44.34% 51.03% 1087 292 TAIR8 Avg. embryo expression (dissected): '2850.3'
Avg. embryo expression (LCM): '2418.69'
AT1G48330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 2 2 25.00% 50.00% 4 4 TAIR8 Avg. embryo expression (dissected): '14.7801'
Avg. embryo expression (LCM): '4.57132'
AT1G48330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G48330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.608846'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G48325 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G48325 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G48325 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G48325 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48325 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48325 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48320 DHNAT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48320 DHNAT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48320 DHNAT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48320 DHNAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '279.854'
Avg. expression score in LCM sample: '72.6518'
Tissue used: 'pure endosperm, no chalazal'
AT1G48320 DHNAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '527.696'
Avg. expression score in LCM sample: '72.6518'
Tissue used: 'full endosperm'
AT1G48320 DHNAT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '245.461'
Avg. embryo expression (LCM): '186.231'
AT1G48315 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.31163 x 10-1 20 15 5 4 57.14% 44.44% 35 9 TAIR8 Avg. embryo expression (dissected): '38.0904'
Avg. embryo expression (LCM): '37.1859'
AT1G48315 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.96 x 10-4 30 1 96.77% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48315 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48315 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.76047 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G48315 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 40 12 25 35 76.92% 58.33% 52 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '47.0352'
Avg. expression score in LCM sample: '19.3425'
Tissue used: 'full endosperm'
AT1G48315 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 4 9 12 75.00% 57.14% 16 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '25.0909'
Avg. expression score in LCM sample: '19.3425'
Tissue used: 'pure endosperm, no chalazal'