GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G147727	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0548 x 10^-3	19	0	11	0	100.00%	0.00%	19	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0020548' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'B73'
GRMZM2G147727	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.6608 x 10^-3	41	7	26	10	85.42%	27.78%	48	36	RefGen V2	χ2 p-value for B73 x Mo17: '9.23e-07' χ2 p-value for Mo17 x B73: '.0076608' Biased in favor of strain: 'B73'
GRMZM2G147726	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.54 x 10^-12	953	650	857	596	59.45%	41.02%	1603	1453	RefGen V2	χ2 p-value for B73 x Mo17: '3.79e-14' χ2 p-value for Mo17 x B73: '7.54e-12' Biased in favor of strain: 'B73'
GRMZM2G147726	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.25 x 10^-5	1472	609	901	1165	70.74%	56.39%	2081	2066	RefGen V2	χ2 p-value for B73 x Mo17: '.0000825' χ2 p-value for Mo17 x B73: '3.78e-23' Biased in favor of strain: 'B73'
GRMZM2G147716	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	6.7063 x 10^-3	19	26	17	13	42.22%	43.33%	45	30	RefGen V2	χ2 p-value for B73 x Mo17: '.0005041' χ2 p-value for Mo17 x B73: '.0067063' Biased in favor of strain: ''
GRMZM2G147716	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	4	2	3	66.67%	60.00%	12	5	RefGen V2	χ2 p-value for B73 x Mo17: '.2482131' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G147712	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.664 x 10^-4	889	562	711	580	61.27%	44.93%	1451	1291	RefGen V2	χ2 p-value for B73 x Mo17: '9.12e-18' χ2 p-value for Mo17 x B73: '.0002664' Biased in favor of strain: 'B73'
GRMZM2G147712	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.37 x 10^-15	1116	344	563	592	76.44%	51.26%	1460	1155	RefGen V2	χ2 p-value for B73 x Mo17: '2.37e-15' χ2 p-value for Mo17 x B73: '1.11e-28' Biased in favor of strain: 'B73'
GRMZM2G147701	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.267995 x 10^-1	12	1	6	7	92.31%	53.85%	13	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0498614' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: ''
GRMZM2G147701	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.9195 x 10^-3	71	22	37	16	76.34%	30.19%	93	53	RefGen V2	χ2 p-value for B73 x Mo17: '3.75e-07' χ2 p-value for Mo17 x B73: '.0039195' Biased in favor of strain: 'B73'
GRMZM2G147687	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2153	1022	1878	1036	67.81%	35.55%	3175	2914	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G147687	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.597528 x 10^-1	2152	1020	1415	2462	67.84%	63.50%	3172	3877	RefGen V2	χ2 p-value for B73 x Mo17: '.1597528' χ2 p-value for Mo17 x B73: '.0000293' Biased in favor of strain: ''
GRMZM2G147685	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	12876	5242	5558	7967	71.07%	58.91%	18118	13525	RefGen V2	χ2 p-value for B73 x Mo17: '3.28e-36' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G147685	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.21 x 10^-17	2537	989	730	1090	71.95%	59.89%	3526	1820	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.21e-17' Biased in favor of strain: ''
GRMZM2G147671	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.53 x 10^-13	304	85	205	83	78.15%	28.82%	389	288	RefGen V2	χ2 p-value for B73 x Mo17: '1.20e-28' χ2 p-value for Mo17 x B73: '6.53e-13' Biased in favor of strain: 'B73'
GRMZM2G147671	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.73 x 10^-20	831	208	577	495	79.98%	46.18%	1039	1072	RefGen V2	χ2 p-value for B73 x Mo17: '8.73e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G147667	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.02237 x 10^-2	223	86	113	158	72.17%	58.30%	309	271	RefGen V2	χ2 p-value for B73 x Mo17: '.0402237' χ2 p-value for Mo17 x B73: '.0034908' Biased in favor of strain: ''
GRMZM2G147667	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.633333 x 10^-1	287	231	268	272	55.41%	50.37%	518	540	RefGen V2	χ2 p-value for B73 x Mo17: '.0138744' χ2 p-value for Mo17 x B73: '.8633333' Biased in favor of strain: ''
GRMZM2G147623	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.98 x 10^-8	442	272	374	237	61.90%	38.79%	714	611	RefGen V2	χ2 p-value for B73 x Mo17: '1.99e-10' χ2 p-value for Mo17 x B73: '2.98e-08' Biased in favor of strain: 'B73'
GRMZM2G147623	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.863201 x 10^-1	417	161	202	368	72.15%	64.56%	578	570	RefGen V2	χ2 p-value for B73 x Mo17: '.0052058' χ2 p-value for Mo17 x B73: '.2863201' Biased in favor of strain: ''
GRMZM2G147619	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.236301 x 10^-1	94	50	63	74	65.28%	54.01%	144	137	RefGen V2	χ2 p-value for B73 x Mo17: '.7236301' χ2 p-value for Mo17 x B73: '.0016812' Biased in favor of strain: ''
GRMZM2G147619	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.42924 x 10^-2	183	113	166	136	61.82%	45.03%	296	302	RefGen V2	χ2 p-value for B73 x Mo17: '.0000473' χ2 p-value for Mo17 x B73: '.0842924' Biased in favor of strain: ''
GRMZM2G147614	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.22 x 10^-5	52	9	57	22	85.25%	27.85%	61	79	RefGen V2	χ2 p-value for B73 x Mo17: '3.68e-08' χ2 p-value for Mo17 x B73: '.0000822' Biased in favor of strain: 'B73'
GRMZM2G147614	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.59 x 10^-6	68	5	35	16	93.15%	31.37%	73	51	RefGen V2	χ2 p-value for B73 x Mo17: '1.59e-06' χ2 p-value for Mo17 x B73: '8.95e-08' Biased in favor of strain: 'B73'
GRMZM2G147603	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G147603	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	1		33.33%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G147587	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	42	42	40	44	50.00%	52.38%	84	84	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.6625206' Biased in favor of strain: ''
GRMZM2G147587	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.40193 x 10^-2	37	44	29	97	45.68%	76.98%	81	126	RefGen V2	χ2 p-value for B73 x Mo17: '.0000615' χ2 p-value for Mo17 x B73: '.0140193' Biased in favor of strain: ''
GRMZM2G147579	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.267289 x 10^-1	630	313	361	682	66.81%	65.39%	943	1043	RefGen V2	χ2 p-value for B73 x Mo17: '.9267289' χ2 p-value for Mo17 x B73: '.3811402' Biased in favor of strain: ''
GRMZM2G147579	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.68996 x 10^-2	368	243	349	296	60.23%	45.89%	611	645	RefGen V2	χ2 p-value for B73 x Mo17: '4.26e-07' χ2 p-value for Mo17 x B73: '.0368996' Biased in favor of strain: 'B73'
GRMZM2G147560	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.02 x 10^-6	38	89	46	133	29.92%	74.30%	127	179	RefGen V2	χ2 p-value for B73 x Mo17: '6.02e-06' χ2 p-value for Mo17 x B73: '7.89e-11' Biased in favor of strain: 'Mo17'
GRMZM2G147560	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.289226 x 10^-1	94	43	41	25	68.61%	37.88%	137	66	RefGen V2	χ2 p-value for B73 x Mo17: '.6289226' χ2 p-value for Mo17 x B73: '7.01e-07' Biased in favor of strain: ''
GRMZM2G147544	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	7	100.00%	77.78%	3	9	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: ''
GRMZM2G147544	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1723	103	1587	89	94.36%	5.31%	1826	1676	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G147534	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.049851 x 10^-1	20	16	16	12	55.56%	42.86%	36	28	RefGen V2	χ2 p-value for B73 x Mo17: '.5049851' χ2 p-value for Mo17 x B73: '.4496918' Biased in favor of strain: ''
GRMZM2G147534	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999998 x 10^-1	16	10	6	12	61.54%	66.67%	26	18	RefGen V2	χ2 p-value for B73 x Mo17: '.579082' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: ''
GRMZM2G147503	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G147503	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	9	0	0.00%	0.00%	2	9	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G147500	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.36 x 10^-11	692	386	699	468	64.19%	40.10%	1078	1167	RefGen V2	χ2 p-value for B73 x Mo17: '1.16e-20' χ2 p-value for Mo17 x B73: '1.36e-11' Biased in favor of strain: 'B73'
GRMZM2G147500	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8156 x 10^-2	426	177	238	292	70.65%	55.09%	603	530	RefGen V2	χ2 p-value for B73 x Mo17: '.038156' χ2 p-value for Mo17 x B73: '1.59e-08' Biased in favor of strain: ''
GRMZM2G147491	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	4	100.00%	100.00%	1	4	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G147491	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G147475	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.49 x 10^-15	84	0	60	0	100.00%	0.00%	84	60	RefGen V2	χ2 p-value for B73 x Mo17: '4.95e-20' χ2 p-value for Mo17 x B73: '9.49e-15' Biased in favor of strain: 'B73'
GRMZM2G147475	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.89 x 10^-12	231	13	39	9	94.67%	18.75%	244	48	RefGen V2	χ2 p-value for B73 x Mo17: '1.70e-20' χ2 p-value for Mo17 x B73: '1.89e-12' Biased in favor of strain: 'B73'
GRMZM2G147454	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.25 x 10^-7	295	80	289	183	78.67%	38.77%	375	472	RefGen V2	χ2 p-value for B73 x Mo17: '8.25e-07' χ2 p-value for Mo17 x B73: '7.94e-38' Biased in favor of strain: 'B73'
GRMZM2G147454	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.0 x 10^-16	800	433	839	538	64.88%	39.07%	1233	1377	RefGen V2	χ2 p-value for B73 x Mo17: '1.44e-25' χ2 p-value for Mo17 x B73: '5.00e-16' Biased in favor of strain: 'B73'
GRMZM2G147452	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	7	0	83.33%	0.00%	6	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G147452	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G147450	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	3	100.00%	60.00%	1	5	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: ''
GRMZM2G147450	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	5	4	5	37.50%	55.56%	8	9	RefGen V2	χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: ''
GRMZM2G147446	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.059975 x 10^-1	22	8	20	11	73.33%	35.48%	30	31	RefGen V2	χ2 p-value for B73 x Mo17: '.0105871' χ2 p-value for Mo17 x B73: '.1059975' Biased in favor of strain: ''
GRMZM2G147446	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	5	2	87.50%	28.57%	8	7	RefGen V2	χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: ''
GRMZM2G147430	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7707 x 10^-3	18	49	15	71	26.87%	82.56%	67	86	RefGen V2	χ2 p-value for B73 x Mo17: '4.81e-12' χ2 p-value for Mo17 x B73: '.0017707' Biased in favor of strain: 'Mo17'
GRMZM2G147430	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.2979 x 10^-2	17	35	12	23	32.69%	65.71%	52	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0125549' χ2 p-value for Mo17 x B73: '.062979' Biased in favor of strain: ''
GRMZM2G147424	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4194	1665	2801	1755	71.58%	38.52%	5859	4556	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G147424	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	21916	4441	10983	8379	83.15%	43.28%	26357	19362	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G147422	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.295706 x 10^-1	99	37	66	84	72.79%	56.00%	136	150	RefGen V2	χ2 p-value for B73 x Mo17: '.1295706' χ2 p-value for Mo17 x B73: '.0055836' Biased in favor of strain: ''
GRMZM2G147422	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03 x 10^-8	1291	1016	1426	1118	55.96%	43.95%	2307	2544	RefGen V2	χ2 p-value for B73 x Mo17: '1.03e-08' χ2 p-value for Mo17 x B73: '1.02e-09' Biased in favor of strain: 'B73'
GRMZM2G147420	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.55 x 10^-6	86	35	149	49	71.07%	24.75%	121	198	RefGen V2	χ2 p-value for B73 x Mo17: '3.55e-06' χ2 p-value for Mo17 x B73: '1.19e-12' Biased in favor of strain: 'B73'
GRMZM2G147420	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	1	5	0.00%	83.33%	1	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: ''
GRMZM2G147418	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.316144 x 10^-1	12	5	12	39	70.59%	76.47%	17	51	RefGen V2	χ2 p-value for B73 x Mo17: '.7316144' χ2 p-value for Mo17 x B73: '.1374853' Biased in favor of strain: ''
GRMZM2G147418	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.24193 x 10^-2	56	24	42	22	70.00%	34.38%	80	64	RefGen V2	χ2 p-value for B73 x Mo17: '.0003466' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: 'B73'
GRMZM2G147402	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.784 x 10^-4	271	174	223	156	60.90%	41.16%	445	379	RefGen V2	χ2 p-value for B73 x Mo17: '4.26e-06' χ2 p-value for Mo17 x B73: '.0005784' Biased in favor of strain: 'B73'
GRMZM2G147402	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.37 x 10^-4	437	153	280	339	74.07%	54.77%	590	619	RefGen V2	χ2 p-value for B73 x Mo17: '.000137' χ2 p-value for Mo17 x B73: '3.36e-10' Biased in favor of strain: 'B73'
GRMZM2G147399	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4492	292	3289	474	93.90%	12.60%	4784	3763	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G147399	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.45 x 10^-26	543	64	259	68	89.46%	20.80%	607	327	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.45e-26' Biased in favor of strain: 'B73'
GRMZM2G147390	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	0	16	100.00%	100.00%	5	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: ''
GRMZM2G147390	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	1	100.00%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G147377	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.121786 x 10^-1	366	200	262	431	64.66%	62.19%	566	693	RefGen V2	χ2 p-value for B73 x Mo17: '.3121786' χ2 p-value for Mo17 x B73: '.0124878' Biased in favor of strain: ''
GRMZM2G147377	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.230633 x 10^-1	363	357	279	320	50.42%	53.42%	720	599	RefGen V2	χ2 p-value for B73 x Mo17: '.8230633' χ2 p-value for Mo17 x B73: '.0938921' Biased in favor of strain: ''
GRMZM2G147346	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.059032 x 10^-1	2	8	7	3	20.00%	30.00%	10	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: ''
GRMZM2G147346	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	5	3	100.00%	37.50%	3	8	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: ''
GRMZM2G147327	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.003482 x 10^-1	34	0	12	9	100.00%	42.86%	34	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0000374' χ2 p-value for Mo17 x B73: '.1003482' Biased in favor of strain: ''
GRMZM2G147327	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.7 x 10^-5	26	0	19	1	100.00%	5.00%	26	20	RefGen V2	χ2 p-value for B73 x Mo17: '3.41e-07' χ2 p-value for Mo17 x B73: '.000057' Biased in favor of strain: 'B73'
GRMZM2G147319	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	3	0	100.00%	0.00%	4	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G147319	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G147268	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.73 x 10^-7	414	111	100	100	78.86%	50.00%	525	200	RefGen V2	χ2 p-value for B73 x Mo17: '3.12e-09' χ2 p-value for Mo17 x B73: '5.73e-07' Biased in favor of strain: 'B73'
GRMZM2G147268	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.42 x 10^-8	224	94	287	170	70.44%	37.20%	318	457	RefGen V2	χ2 p-value for B73 x Mo17: '3.10e-13' χ2 p-value for Mo17 x B73: '4.42e-08' Biased in favor of strain: 'B73'
GRMZM2G147256	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.35 x 10^-5	112	26	91	41	81.16%	31.06%	138	132	RefGen V2	χ2 p-value for B73 x Mo17: '2.46e-13' χ2 p-value for Mo17 x B73: '.0000135' Biased in favor of strain: 'B73'
GRMZM2G147256	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.99 x 10^-11	424	104	111	84	80.30%	43.08%	528	195	RefGen V2	χ2 p-value for B73 x Mo17: '2.99e-11' χ2 p-value for Mo17 x B73: '2.79e-12' Biased in favor of strain: 'B73'
GRMZM2G147245	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G147245	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8924 x 10^-3	5	23	1	11	17.86%	91.67%	28	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0006697' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: 'Mo17'
GRMZM2G147241	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	6	0	83.33%	0.00%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G147241	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G147226	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	0.0	7600	281	905	3235	96.43%	78.14%	7881	4140	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G147226	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	841	104	92	395	88.99%	81.11%	945	487	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G147221	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	8	0	0.00%	0.00%	4	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G147221	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G147191	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.652324 x 10^-1	184	94	127	261	66.19%	67.27%	278	388	RefGen V2	χ2 p-value for B73 x Mo17: '.8652324' χ2 p-value for Mo17 x B73: '.8015943' Biased in favor of strain: ''
GRMZM2G147191	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.34643 x 10^-2	311	257	384	195	54.75%	33.68%	568	579	RefGen V2	χ2 p-value for B73 x Mo17: '.0234643' χ2 p-value for Mo17 x B73: '4.01e-15' Biased in favor of strain: 'B73'
GRMZM2G147158	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.45297 x 10^-1	244	219	217	294	52.70%	57.53%	463	511	RefGen V2	χ2 p-value for B73 x Mo17: '.245297' χ2 p-value for Mo17 x B73: '.0006585' Biased in favor of strain: ''
GRMZM2G147158	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.889196 x 10^-1	323	260	239	463	55.40%	65.95%	583	702	RefGen V2	χ2 p-value for B73 x Mo17: '7.96e-09' χ2 p-value for Mo17 x B73: '.6889196' Biased in favor of strain: ''
GRMZM2G147145	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.34 x 10^-8	164	219	133	448	42.82%	77.11%	383	581	RefGen V2	χ2 p-value for B73 x Mo17: '4.16e-23' χ2 p-value for Mo17 x B73: '9.34e-08' Biased in favor of strain: 'Mo17'
GRMZM2G147145	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.473 x 10^-4	354	265	314	202	57.19%	39.15%	619	516	RefGen V2	χ2 p-value for B73 x Mo17: '.0003473' χ2 p-value for Mo17 x B73: '8.20e-07' Biased in favor of strain: 'B73'
GRMZM2G147123	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.750505 x 10^-1	22	27	21	36	44.90%	63.16%	49	57	RefGen V2	χ2 p-value for B73 x Mo17: '.4750505' χ2 p-value for Mo17 x B73: '.0469447' Biased in favor of strain: ''
GRMZM2G147123	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.723709 x 10^-1	52	35	15	73	59.77%	82.95%	87	88	RefGen V2	χ2 p-value for B73 x Mo17: '.1723709' χ2 p-value for Mo17 x B73: '.0011901' Biased in favor of strain: ''
GRMZM2G147051	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.53 x 10^-21	493	87	287	220	85.00%	43.39%	580	507	RefGen V2	χ2 p-value for B73 x Mo17: '7.53e-21' χ2 p-value for Mo17 x B73: '1.04e-28' Biased in favor of strain: 'B73'
GRMZM2G147051	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	787	280	1280	529	73.76%	29.24%	1067	1809	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G147046	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	694	132	524	171	84.02%	24.60%	826	695	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G147046	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2852	267	1643	329	91.44%	16.68%	3119	1972	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'

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