Displaying data sets 144601 - 144700 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G49750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.3741'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G49750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.740692'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G49750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.26136'
Avg. embryo expression (LCM): '1.43168'
AT1G49740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.38262 x 10-1 21 16 6 4 56.76% 40.00% 37 10 TAIR8 Avg. embryo expression (dissected): '228.996'
Avg. embryo expression (LCM): '131.94'
AT1G49740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.768 x 10-3 38 2 95.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.64683 x 10-1 19 10 65.52% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.9723 x 10-2 22 6 13 56 78.57% 81.16% 28 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004926'
Avg. expression score for this sample: '281.63'
Avg. expression score in LCM sample: '55.2054'
Tissue used: 'pure endosperm, no chalazal'
AT1G49740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.0106 x 10-2 66 25 15 63 72.53% 80.77% 91 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004926'
Avg. expression score for this sample: '356.434'
Avg. expression score in LCM sample: '55.2054'
Tissue used: 'full endosperm'
AT1G49740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-6 99 3 97.06% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.67234 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 3 7 10 76.92% 58.82% 13 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.63191'
Avg. expression score for this sample: '310.342'
Avg. expression score in LCM sample: '35.6277'
Tissue used: 'full endosperm'
AT1G49730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.10777 x 10-1 6 1 0 4 85.71% 100.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.63191'
Avg. expression score for this sample: '217.638'
Avg. expression score in LCM sample: '35.6277'
Tissue used: 'pure endosperm, no chalazal'
AT1G49730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.18245 x 10-1 16 7 3 2 69.57% 40.00% 23 5 TAIR8 Avg. embryo expression (dissected): '565.344'
Avg. embryo expression (LCM): '248.019'
AT1G49720 ABF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '99.2816'
Avg. embryo expression (LCM): '58.8369'
AT1G49720 ABF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49720 ABF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49720 ABF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '57.3546'
Avg. expression score in LCM sample: '38.5526'
Tissue used: 'pure endosperm, no chalazal'
AT1G49720 ABF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '73.0759'
Avg. expression score in LCM sample: '38.5526'
Tissue used: 'full endosperm'
AT1G49720 ABF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49715 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49715 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G49715 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G49715 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49715 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49715 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G49710 FUT12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '52.654'
Avg. embryo expression (LCM): '53.4493'
AT1G49710 FUT12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.34084 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49710 FUT12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49710 FUT12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '63.2244'
Avg. expression score in LCM sample: '22.8112'
Tissue used: 'pure endosperm, no chalazal'
AT1G49710 FUT12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.81659 x 10-1 5 1 2 7 83.33% 77.78% 6 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '123.493'
Avg. expression score in LCM sample: '22.8112'
Tissue used: 'full endosperm'
AT1G49710 FUT12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.503 x 10-3 25 0 100.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.18262 x 10-1 78 1 22 1 98.73% 4.35% 79 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159833'
Avg. expression score for this sample: '155.025'
Avg. expression score in LCM sample: '74.298'
Tissue used: 'full endosperm'
AT1G49700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 0 7 0 100.00% 0.00% 15 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159833'
Avg. expression score for this sample: '28.5581'
Avg. expression score in LCM sample: '74.298'
Tissue used: 'pure endosperm, no chalazal'
AT1G49700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6366 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.248 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.36531 x 10-1 20 0 15 0 100.00% 0.00% 20 15 TAIR8 Avg. embryo expression (dissected): '79.2127'
Avg. embryo expression (LCM): '65.1916'
AT1G49690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G49690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G49690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G49690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '39.1271'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G49680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.871252'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G49680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G49670 NQR embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.82205 x 10-1 29 17 10 10 63.04% 50.00% 46 20 TAIR8 Avg. embryo expression (dissected): '35.4869'
Avg. embryo expression (LCM): '15.3466'
AT1G49670 NQR endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.16647 x 10-1 413 153 72.97% 566 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49670 NQR endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.85312 x 10-1 53 17 75.71% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49670 NQR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 72 50 35 101 59.02% 74.26% 122 136 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003868'
Avg. expression score for this sample: '75.8126'
Avg. expression score in LCM sample: '59.6441'
Tissue used: 'pure endosperm, no chalazal'
AT1G49670 NQR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0015 385 97 207 432 79.88% 67.61% 482 639 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003868'
Avg. expression score for this sample: '198.882'
Avg. expression score in LCM sample: '59.6441'
Tissue used: 'full endosperm'
AT1G49670 NQR endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-17 517 66 88.68% 583 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49660 CXE5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0 x 10-22 451 7 98.47% 458 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49660 CXE5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0 x 10-30 599 46 68 246 92.87% 78.34% 645 314 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.2e-33'
Avg. expression score for this sample: '234.039'
Avg. expression score in LCM sample: '64.0241'
Tissue used: 'full endosperm'
AT1G49660 CXE5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.9 x 10-8 487 56 114 151 89.69% 56.98% 543 265 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.2e-33'
Avg. expression score for this sample: '242.854'
Avg. expression score in LCM sample: '64.0241'
Tissue used: 'pure endosperm, no chalazal'
AT1G49660 CXE5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.04562 x 10-1 116 23 83.45% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49660 CXE5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.03 x 10-4 201 67 75.00% 268 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49660 CXE5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.813 x 10-3 192 91 46 20 67.84% 30.30% 283 66 TAIR8 Avg. embryo expression (dissected): '165.273'
Avg. embryo expression (LCM): '53.5623'
AT1G49650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.40271 x 10-1 179 135 29 26 57.01% 47.27% 314 55 TAIR8 Avg. embryo expression (dissected): '134.912'
Avg. embryo expression (LCM): '102.691'
AT1G49650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9 x 10-25 364 13 96.55% 377 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.85 x 10-4 69 8 89.61% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 67 27 21 26 71.28% 55.32% 94 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089982'
Avg. expression score for this sample: '55.775'
Avg. expression score in LCM sample: '4.2477'
Tissue used: 'pure endosperm, no chalazal'
AT1G49650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6144 x 10-2 145 51 45 129 73.98% 74.14% 196 174 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089982'
Avg. expression score for this sample: '72.6825'
Avg. expression score in LCM sample: '4.2477'
Tissue used: 'full endosperm'
AT1G49650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 458 9 98.07% 467 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.226 x 10-3 481 22 95.63% 503 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-21 79 0 1 118 100.00% 99.16% 79 119 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.1e-29'
Avg. expression score for this sample: '26.2513'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G49640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3 x 10-7 36 0 0 27 100.00% 100.00% 36 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.1e-29'
Avg. expression score for this sample: '18.1602'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G49640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 72 0 100.00% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.223 x 10-3 480 22 95.62% 502 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.0206 x 10-2 9 1 0 3 90.00% 100.00% 10 3 TAIR8 Avg. embryo expression (dissected): '4.28149'
Avg. embryo expression (LCM): '0'
AT1G49630 PREP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.436 x 10-3 173 82 51 33 67.84% 39.29% 255 84 TAIR8 Avg. embryo expression (dissected): '83.8825'
Avg. embryo expression (LCM): '93.4358'
AT1G49630 PREP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.74862 x 10-1 17 5 77.27% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49630 PREP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.3879 x 10-2 12 18 40.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49630 PREP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 69 12 32 23 85.19% 41.82% 81 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.093636'
Avg. expression score for this sample: '21.4354'
Avg. expression score in LCM sample: '14.8596'
Tissue used: 'pure endosperm, no chalazal'
AT1G49630 PREP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9497 x 10-2 69 29 74 64 70.41% 46.38% 98 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.093636'
Avg. expression score for this sample: '31.215'
Avg. expression score in LCM sample: '14.8596'
Tissue used: 'full endosperm'
AT1G49630 PREP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.1 x 10-11 107 11 90.68% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49620 ICK5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.4915 x 10-2 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49620 ICK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.46935 x 10-1 2 0 6 1 100.00% 14.29% 2 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36985'
Avg. expression score for this sample: '2.39467'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G49620 ICK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36985'
Avg. expression score for this sample: '.99035'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G49620 ICK5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49620 ICK5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54545 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49620 ICK5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.90529 x 10-1 8 5 1 3 61.54% 75.00% 13 4 TAIR8 Avg. embryo expression (dissected): '11.5599'
Avg. embryo expression (LCM): '27.2019'
AT1G49610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 0 0 3 100.00% 0 3 TAIR8 Avg. embryo expression (dissected): '2.38078'
Avg. embryo expression (LCM): '0'
AT1G49610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.952 x 10-2 6 6 50.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.54545 x 10-1 5 0 0 1 100.00% 100.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '1.45526'
Avg. expression score in LCM sample: '9.70062'
Tissue used: 'pure endosperm, no chalazal'
AT1G49610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 2 4 100.00% 66.67% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '2.91614'
Avg. expression score in LCM sample: '9.70062'
Tissue used: 'full endosperm'
AT1G49610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.36504 x 10-1 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49600 RBP47A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.84 x 10-4 6 19 24.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G49600 RBP47A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 13 5 22 58.06% 81.48% 31 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.364087'
Avg. expression score for this sample: '93.3383'
Avg. expression score in LCM sample: '93.4934'
Tissue used: 'full endosperm'
AT1G49600 RBP47A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1284 x 10-1 15 33 14 49 31.25% 77.78% 48 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.364087'
Avg. expression score for this sample: '196.713'
Avg. expression score in LCM sample: '93.4934'
Tissue used: 'pure endosperm, no chalazal'
AT1G49600 RBP47A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.90596 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'