| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G50440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.81162 x 10-1 | 3 | 7 | 30.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 3 | 0 | 100.00% | 0.00% | 3 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.429569' Avg. expression score for this sample: '50.6521' Avg. expression score in LCM sample: '27.3675' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G50440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.55643 x 10-1 | 13 | 2 | 9 | 0 | 86.67% | 0.00% | 15 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.429569' Avg. expression score for this sample: '59.3426' Avg. expression score in LCM sample: '27.3675' Tissue used: 'full endosperm' |
|||||
| AT1G50440 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.116 x 10-3 | 25 | 2 | 92.59% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50430 | DWF5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5 x 10-23 | 339 | 26 | 92.88% | 365 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50430 | DWF5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.98969 x 10-1 | 119 | 61 | 106 | 241 | 66.11% | 69.45% | 180 | 347 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.953585' Avg. expression score for this sample: '240.971' Avg. expression score in LCM sample: '81.353' Tissue used: 'full endosperm' |
||||
| AT1G50430 | DWF5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.51528 x 10-1 | 42 | 25 | 28 | 43 | 62.69% | 60.56% | 67 | 71 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.953585' Avg. expression score for this sample: '219.389' Avg. expression score in LCM sample: '81.353' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G50430 | DWF5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.48 x 10-4 | 266 | 75 | 78.01% | 341 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50430 | DWF5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 28 | 13 | 68.29% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50430 | DWF5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.5127 x 10-2 | 63 | 102 | 29 | 20 | 38.18% | 40.82% | 165 | 49 | TAIR8 |
Avg. embryo expression (dissected): '498.897' Avg. embryo expression (LCM): '210.859' |
|||
| AT1G50420 | SCL3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 8 | 6 | 5 | 4 | 57.14% | 44.44% | 14 | 9 | TAIR8 |
Avg. embryo expression (dissected): '89.2582' Avg. embryo expression (LCM): '64.4381' |
|||
| AT1G50420 | SCL3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 14 | 3 | 82.35% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50420 | SCL3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 2 | 83.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50420 | SCL3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.38433 x 10-1 | 6 | 1 | 2 | 8 | 85.71% | 80.00% | 7 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.072353' Avg. expression score for this sample: '64.1902' Avg. expression score in LCM sample: '17.3435' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G50420 | SCL3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.63711 x 10-1 | 24 | 5 | 4 | 16 | 82.76% | 80.00% | 29 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.072353' Avg. expression score for this sample: '104.76' Avg. expression score in LCM sample: '17.3435' Tissue used: 'full endosperm' |
||||
| AT1G50420 | SCL3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.379 x 10-3 | 59 | 2 | 96.72% | 61 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50410 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.895 x 10-3 | 26 | 1 | 96.30% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 6 | 3 | 10 | 40.00% | 76.92% | 10 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '100.709' Avg. expression score in LCM sample: '37.6855' Tissue used: 'full endosperm' |
|||||
| AT1G50410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 9 | 2 | 4 | 6 | 81.82% | 60.00% | 11 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '65.3287' Avg. expression score in LCM sample: '37.6855' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G50410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.05695 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50410 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 4 | 5 | 1 | 2 | 44.44% | 66.67% | 9 | 3 | TAIR8 |
Avg. embryo expression (dissected): '76.5802' Avg. embryo expression (LCM): '56.074' |
||||
| AT1G50410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.03905 x 10-1 | 22 | 4 | 84.62% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50400 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50400 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G50400 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G50400 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G50400 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.449551' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G50400 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50390 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50390 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.828046' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G50390 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G50390 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G50390 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50390 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G50380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.33333 x 10-1 | 0 | 3 | 0.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50380 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 14 | 15 | 5 | 6 | 48.28% | 54.55% | 29 | 11 | TAIR8 |
Avg. embryo expression (dissected): '338.537' Avg. embryo expression (LCM): '235.046' |
||||
| AT1G50380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.4773 x 10-2 | 10 | 1 | 90.91% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.33222 x 10-1 | 3 | 6 | 2 | 7 | 33.33% | 77.78% | 9 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.266298' Avg. expression score for this sample: '91.1283' Avg. expression score in LCM sample: '32.9674' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G50380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.80129 x 10-1 | 4 | 8 | 4 | 8 | 33.33% | 66.67% | 12 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.266298' Avg. expression score for this sample: '249.191' Avg. expression score in LCM sample: '32.9674' Tissue used: 'full endosperm' |
|||||
| AT1G50380 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1674 x 10-1 | 7 | 1 | 87.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50370 | FYPP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.22728 x 10-1 | 9 | 5 | 64.29% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50370 | FYPP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.04715 x 10-1 | 15 | 5 | 4 | 12 | 75.00% | 75.00% | 20 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.668502' Avg. expression score for this sample: '106.27' Avg. expression score in LCM sample: '48.6207' Tissue used: 'full endosperm' |
||||
| AT1G50370 | FYPP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 5 | 0 | 10 | 16.67% | 100.00% | 6 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.668502' Avg. expression score for this sample: '108.047' Avg. expression score in LCM sample: '48.6207' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G50370 | FYPP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.42895 x 10-1 | 13 | 3 | 81.25% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50370 | FYPP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50370 | FYPP1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.57057 x 10-1 | 1 | 11 | 2 | 3 | 8.33% | 60.00% | 12 | 5 | TAIR8 |
Avg. embryo expression (dissected): '148.951' Avg. embryo expression (LCM): '111.646' |
|||
| AT1G50360 | VIIIA | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.41554 x 10-1 | 155 | 152 | 36 | 29 | 50.49% | 44.62% | 307 | 65 | TAIR8 |
Avg. embryo expression (dissected): '110.398' Avg. embryo expression (LCM): '98.0322' |
|||
| AT1G50360 | VIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.1 x 10-5 | 57 | 3 | 95.00% | 60 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50360 | VIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.86214 x 10-1 | 50 | 12 | 80.65% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50360 | VIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 57 | 26 | 35 | 68 | 68.67% | 66.02% | 83 | 103 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.006102' Avg. expression score for this sample: '49.729' Avg. expression score in LCM sample: '10.6854' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G50360 | VIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.126 x 10-3 | 167 | 59 | 41 | 164 | 73.89% | 80.00% | 226 | 205 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.006102' Avg. expression score for this sample: '71.4579' Avg. expression score in LCM sample: '10.6854' Tissue used: 'full endosperm' |
||||
| AT1G50360 | VIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.8 x 10-8 | 156 | 13 | 92.31% | 169 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50350 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G50350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.870142' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G50350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.30252' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G50350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G50350 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.725803' Avg. embryo expression (LCM): '0' |
|||||
| AT1G50350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G50340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G50340 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G50340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G50340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G50340 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G50325 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.31527 x 10-1 | 15 | 11 | 57.69% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50325 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.36098' Avg. expression score in LCM sample: '11.9641' Tissue used: 'full endosperm' |
||||||
| AT1G50325 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.09472' Avg. expression score in LCM sample: '11.9641' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G50325 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.472835' Avg. embryo expression (LCM): '0' |
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| AT1G50325 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 58 | 22 | 72.50% | 80 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50325 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G50320 | THX | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50320 | THX | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '479.28' Avg. embryo expression (LCM): '250.87' |
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| AT1G50320 | THX | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50320 | THX | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '336.501' Avg. expression score in LCM sample: '101.372' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G50320 | THX | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '380.602' Avg. expression score in LCM sample: '101.372' Tissue used: 'full endosperm' |
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| AT1G50320 | THX | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50310 | STP9 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 2 | 80.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50310 | STP9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 9 | 2 | 1 | 1 | 81.82% | 50.00% | 11 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.677617' Avg. expression score for this sample: '8.50431' Avg. expression score in LCM sample: '.955364' Tissue used: 'full endosperm' |
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| AT1G50310 | STP9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.677617' Avg. expression score for this sample: '3.99404' Avg. expression score in LCM sample: '.955364' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G50310 | STP9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50310 | STP9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50310 | STP9 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.82051 x 10-1 | 5 | 1 | 0 | 1 | 83.33% | 100.00% | 6 | 1 | TAIR8 |
Avg. embryo expression (dissected): '7.9389' Avg. embryo expression (LCM): '0' |
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| AT1G50300 | TAF15 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.22445 x 10-1 | 313 | 368 | 57 | 106 | 45.96% | 65.03% | 681 | 163 | TAIR8 |
Avg. embryo expression (dissected): '694.3' Avg. embryo expression (LCM): '426.828' |
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| AT1G50300 | TAF15 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.125 x 10-3 | 353 | 116 | 75.27% | 469 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50300 | TAF15 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.052 x 10-3 | 77 | 17 | 81.91% | 94 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50300 | TAF15 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.20012 x 10-1 | 262 | 187 | 116 | 251 | 58.35% | 68.39% | 449 | 367 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.47974' Avg. expression score for this sample: '597' Avg. expression score in LCM sample: '78.4575' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G50300 | TAF15 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.347 x 10-3 | 306 | 109 | 115 | 296 | 73.73% | 72.02% | 415 | 411 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.47974' Avg. expression score for this sample: '350.874' Avg. expression score in LCM sample: '78.4575' Tissue used: 'full endosperm' |
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| AT1G50300 | TAF15 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.9 x 10-20 | 452 | 65 | 87.43% | 517 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G50290 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.29434 x 10-1 | 6 | 2 | 75.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.3 x 10-6 | 16 | 48 | 5 | 245 | 25.00% | 98.00% | 64 | 250 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '6.7e-07' Avg. expression score for this sample: '99.2117' Avg. expression score in LCM sample: '3.36582' Tissue used: 'full endosperm' |
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| AT1G50290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.9608 x 10-1 | 4 | 5 | 2 | 29 | 44.44% | 93.55% | 9 | 31 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '6.7e-07' Avg. expression score for this sample: '17.2117' Avg. expression score in LCM sample: '3.36582' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G50290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-4 | 53 | 0 | 100.00% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50290 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.9859 x 10-2 | 2 | 21 | 0 | 3 | 8.70% | 100.00% | 23 | 3 | TAIR8 |
Avg. embryo expression (dissected): '17.0068' Avg. embryo expression (LCM): '4.30759' |
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| AT1G50290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.7 x 10-9 | 126 | 0 | 100.00% | 126 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 3 | 66.67% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G50280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G50280 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 4 | 0 | 0 | 42.86% | 7 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.91956' Avg. embryo expression (LCM): '4.78482' |
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| AT1G50280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.81838' Avg. expression score in LCM sample: '2.39576' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G50280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.2' Avg. expression score in LCM sample: '2.39576' Tissue used: 'full endosperm' |
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| AT1G50280 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |