Displaying data sets 144101 - 144200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G50610 PRK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.224767'
Avg. expression score in LCM sample: '.63201'
Tissue used: 'pure endosperm, no chalazal'
AT1G50610 PRK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.312214'
Avg. expression score in LCM sample: '.63201'
Tissue used: 'full endosperm'
AT1G50603 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G50603 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G50603 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G50603 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50603 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50603 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50600 SCL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1061 147 87.83% 1208 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50600 SCL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1204 x 10-2 636 440 319 1114 59.11% 77.74% 1076 1433 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-13'
Avg. expression score for this sample: '351.348'
Avg. expression score in LCM sample: '149.272'
Tissue used: 'pure endosperm, no chalazal'
AT1G50600 SCL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-13 1219 791 625 2657 60.65% 80.96% 2010 3282 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-13'
Avg. expression score for this sample: '551.142'
Avg. expression score in LCM sample: '149.272'
Tissue used: 'full endosperm'
AT1G50600 SCL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.04 x 10-4 380 94 80.17% 474 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50600 SCL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.91283 x 10-1 368 415 92 153 47.00% 62.45% 783 245 TAIR8 Avg. embryo expression (dissected): '231.867'
Avg. embryo expression (LCM): '97.6429'
AT1G50600 SCL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 898 28 96.98% 926 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G50590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.4457'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G50590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.31289'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G50580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 4 100.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '.9677'
Avg. expression score in LCM sample: '3.27764'
Tissue used: 'pure endosperm, no chalazal'
AT1G50580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 3 0.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '1.02409'
Avg. expression score in LCM sample: '3.27764'
Tissue used: 'full endosperm'
AT1G50580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G50580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50575 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7196 x 10-2 11 12 47.83% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50575 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.65322 x 10-1 6 2 1 14 75.00% 93.33% 8 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.450839'
Avg. expression score for this sample: '14.576'
Avg. expression score in LCM sample: '7.52533'
Tissue used: 'full endosperm'
AT1G50575 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 4 2 2 66.67% 50.00% 12 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.450839'
Avg. expression score for this sample: '10.3299'
Avg. expression score in LCM sample: '7.52533'
Tissue used: 'pure endosperm, no chalazal'
AT1G50575 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.85528 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50575 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 9 3 5 47.06% 62.50% 17 8 TAIR8 Avg. embryo expression (dissected): '33.0199'
Avg. embryo expression (LCM): '55.6722'
AT1G50575 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.98884 x 10-1 19 2 90.48% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.79366 x 10-1 106 23 82.17% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.17285 x 10-1 32 6 84.21% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-9 232 16 93.55% 248 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.98787 x 10-1 54 43 7 16 55.67% 69.57% 97 23 TAIR8 Avg. embryo expression (dissected): '77.618'
Avg. embryo expression (LCM): '86.8049'
AT1G50570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.51691 x 10-1 40 18 12 33 68.97% 73.33% 58 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003938'
Avg. expression score for this sample: '39.9464'
Avg. expression score in LCM sample: '20.3125'
Tissue used: 'pure endosperm, no chalazal'
AT1G50570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.276 x 10-3 122 19 42 97 86.52% 69.78% 141 139 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003938'
Avg. expression score for this sample: '99.4357'
Avg. expression score in LCM sample: '20.3125'
Tissue used: 'full endosperm'
AT1G50560 CYP705A25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.77684 x 10-1 22 10 5 18 68.75% 78.26% 32 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.861177'
Avg. expression score for this sample: '17.6452'
Avg. expression score in LCM sample: '.734896'
Tissue used: 'full endosperm'
AT1G50560 CYP705A25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 6 2 7 45.45% 77.78% 11 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.861177'
Avg. expression score for this sample: '7.42371'
Avg. expression score in LCM sample: '.734896'
Tissue used: 'pure endosperm, no chalazal'
AT1G50560 CYP705A25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.14143 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50560 CYP705A25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.8977 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50560 CYP705A25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 11 7 1 0 61.11% 0.00% 18 1 TAIR8 Avg. embryo expression (dissected): '8.04891'
Avg. embryo expression (LCM): '0'
AT1G50560 CYP705A25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.00758 x 10-1 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G50530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G50530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.488681'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G50530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50520 CYP705A27 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.27273 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50520 CYP705A27 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50520 CYP705A27 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 1 4 1 0 20.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '11.7272'
Avg. embryo expression (LCM): '2.86336'
AT1G50520 CYP705A27 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.27273 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50520 CYP705A27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 5 0 3 37.50% 100.00% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '14.5155'
Avg. expression score in LCM sample: '5.87917'
Tissue used: 'full endosperm'
AT1G50520 CYP705A27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 4 0 2 33.33% 100.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '10.5679'
Avg. expression score in LCM sample: '5.87917'
Tissue used: 'pure endosperm, no chalazal'
AT1G50510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.99472 x 10-1 36 9 11 22 80.00% 66.67% 45 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.320509'
Avg. expression score for this sample: '19.8535'
Avg. expression score in LCM sample: '13.9924'
Tissue used: 'pure endosperm, no chalazal'
AT1G50510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.98484 x 10-1 77 17 46 68 81.91% 59.65% 94 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.320509'
Avg. expression score for this sample: '32.6559'
Avg. expression score in LCM sample: '13.9924'
Tissue used: 'full endosperm'
AT1G50510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.21361 x 10-1 162 51 76.06% 213 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1423 x 10-2 21 1 95.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-6 216 29 88.16% 245 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.22065 x 10-1 32 22 11 13 59.26% 54.17% 54 24 TAIR8 Avg. embryo expression (dissected): '34.4419'
Avg. embryo expression (LCM): '33.0919'
AT1G50500 HIT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50500 HIT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.1209'
Avg. embryo expression (LCM): '30.6178'
AT1G50500 HIT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '45.9164'
Avg. expression score in LCM sample: '26.1035'
Tissue used: 'full endosperm'
AT1G50500 HIT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '38.2682'
Avg. expression score in LCM sample: '26.1035'
Tissue used: 'pure endosperm, no chalazal'
AT1G50500 HIT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50500 HIT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50490 UBC20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.40072 x 10-1 152 106 58.91% 258 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50490 UBC20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.08196 x 10-1 18 8 69.23% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50490 UBC20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.5098 x 10-2 412 306 95 62 57.38% 39.49% 718 157 TAIR8 Avg. embryo expression (dissected): '555.533'
Avg. embryo expression (LCM): '483.342'
AT1G50490 UBC20 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.75688 x 10-1 109 63 63.37% 172 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50490 UBC20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.67536 x 10-1 98 50 51 56 66.22% 52.34% 148 107 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002764'
Avg. expression score for this sample: '105.263'
Avg. expression score in LCM sample: '193.395'
Tissue used: 'pure endosperm, no chalazal'
AT1G50490 UBC20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.196 x 10-3 65 24 81 55 73.03% 40.44% 89 136 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002764'
Avg. expression score for this sample: '88.5491'
Avg. expression score in LCM sample: '193.395'
Tissue used: 'full endosperm'
AT1G50480 THFS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.6154 x 10-2 98 15 38 66 86.73% 63.46% 113 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009015'
Avg. expression score for this sample: '755.064'
Avg. expression score in LCM sample: '344.078'
Tissue used: 'full endosperm'
AT1G50480 THFS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.4269 x 10-2 61 8 16 23 88.41% 58.97% 69 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009015'
Avg. expression score for this sample: '582.091'
Avg. expression score in LCM sample: '344.078'
Tissue used: 'pure endosperm, no chalazal'
AT1G50480 THFS endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.92013 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50480 THFS endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4359 x 10-2 150 25 85.71% 175 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50480 THFS endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9 x 10-23 506 12 97.68% 518 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50480 THFS embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.3027 x 10-2 82 36 22 18 69.49% 45.00% 118 40 TAIR8 Avg. embryo expression (dissected): '1420.27'
Avg. embryo expression (LCM): '679.519'
AT1G50470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G50470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G50470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.459144'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G50470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50460 HKL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.2767 x 10-2 13 12 52.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50460 HKL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.05969 x 10-1 23 6 79.31% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50460 HKL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-14 253 25 91.01% 278 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50460 HKL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.34371 x 10-1 56 73 24 18 43.41% 42.86% 129 42 TAIR8 Avg. embryo expression (dissected): '282.095'
Avg. embryo expression (LCM): '111.294'
AT1G50460 HKL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.6776 x 10-1 146 77 57 136 65.47% 70.47% 223 193 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.379366'
Avg. expression score for this sample: '184.246'
Avg. expression score in LCM sample: '86.1298'
Tissue used: 'full endosperm'
AT1G50460 HKL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.65569 x 10-1 160 36 66 80 81.63% 54.79% 196 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.379366'
Avg. expression score for this sample: '204.74'
Avg. expression score in LCM sample: '86.1298'
Tissue used: 'pure endosperm, no chalazal'
AT1G50450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 2 0 0 3 100.00% 100.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.787875'
Avg. expression score for this sample: '46.3756'
Avg. expression score in LCM sample: '22.87'
Tissue used: 'pure endosperm, no chalazal'
AT1G50450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 14 3 6 4 82.35% 40.00% 17 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.787875'
Avg. expression score for this sample: '54.7115'
Avg. expression score in LCM sample: '22.87'
Tissue used: 'full endosperm'
AT1G50450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5764 x 10-2 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.08021 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.66667 x 10-1 4 0 0 1 100.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '101.577'
Avg. embryo expression (LCM): '56.8401'
AT1G50450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9302 x 10-1 14 2 87.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.116 x 10-3 25 2 92.59% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G50440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '40.5605'
Avg. embryo expression (LCM): '24.4013'