| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G148213 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.76 x 10-6 | 130 | 19 | 83 | 82 | 87.25% | 49.70% | 149 | 165 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.86e-08' χ2 p-value for Mo17 x B73: '3.76e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G148213 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.16494 x 10-2 | 88 | 67 | 81 | 49 | 56.77% | 37.69% | 155 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0916494' χ2 p-value for Mo17 x B73: '.005007' Biased in favor of strain: '' |
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| GRMZM2G148211 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.78056 x 10-2 | 118 | 149 | 86 | 144 | 44.19% | 62.61% | 267 | 230 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0578056' χ2 p-value for Mo17 x B73: '.0001311' Biased in favor of strain: '' |
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| GRMZM2G148211 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.10508 x 10-2 | 145 | 48 | 108 | 168 | 75.13% | 60.87% | 193 | 276 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0126321' χ2 p-value for Mo17 x B73: '.0410508' Biased in favor of strain: '' |
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| GRMZM2G148200 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.99984 x 10-1 | 8 | 4 | 3 | 10 | 66.67% | 76.92% | 12 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999984' χ2 p-value for Mo17 x B73: '.4327677' Biased in favor of strain: '' |
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| GRMZM2G148200 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.907458 x 10-1 | 18 | 20 | 26 | 27 | 47.37% | 50.94% | 38 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7456028' χ2 p-value for Mo17 x B73: '.8907458' Biased in favor of strain: '' |
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| GRMZM2G148198 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5654 x 10-3 | 16 | 0 | 10 | 0 | 100.00% | 0.00% | 16 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'B73' |
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| GRMZM2G148198 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G148194 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.049583 x 10-1 | 167 | 66 | 104 | 154 | 71.67% | 59.69% | 233 | 258 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1049583' χ2 p-value for Mo17 x B73: '.0174438' Biased in favor of strain: '' |
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| GRMZM2G148194 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.7733 x 10-3 | 539 | 324 | 543 | 460 | 62.46% | 45.86% | 863 | 1003 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.50e-13' χ2 p-value for Mo17 x B73: '.0087733' Biased in favor of strain: 'B73' |
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| GRMZM2G148180 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.083652 x 10-1 | 9 | 8 | 7 | 9 | 52.94% | 56.25% | 17 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8083652' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: '' |
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| GRMZM2G148180 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 4 | 1 | 100.00% | 20.00% | 4 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: '' |
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| GRMZM2G148176 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.434292 x 10-1 | 60 | 23 | 26 | 58 | 72.29% | 69.05% | 83 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2772264' χ2 p-value for Mo17 x B73: '.6434292' Biased in favor of strain: '' |
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| GRMZM2G148176 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.22 x 10-26 | 257 | 66 | 263 | 64 | 79.57% | 19.57% | 323 | 327 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.22e-26' χ2 p-value for Mo17 x B73: '3.63e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G148167 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.18 x 10-26 | 426 | 166 | 433 | 139 | 71.96% | 24.30% | 592 | 572 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-26' χ2 p-value for Mo17 x B73: '9.91e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G148167 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G148147 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 4 | 0 | 1 | 20.00% | 100.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0268555' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G148147 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 2 | 6 | 0.00% | 75.00% | 1 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G148144 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G148144 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 0 | 0.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G148133 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.020281 x 10-1 | 3 | 8 | 10 | 13 | 27.27% | 56.52% | 11 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0055776' χ2 p-value for Mo17 x B73: '.3020281' Biased in favor of strain: '' |
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| GRMZM2G148133 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.59 x 10-19 | 212 | 63 | 212 | 41 | 77.09% | 16.21% | 275 | 253 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.59e-19' χ2 p-value for Mo17 x B73: '5.88e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G148130 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.274396 x 10-1 | 147 | 122 | 182 | 127 | 54.65% | 41.10% | 269 | 309 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1274396' χ2 p-value for Mo17 x B73: '.001755' Biased in favor of strain: '' |
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| GRMZM2G148130 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.21632 x 10-2 | 117 | 75 | 101 | 93 | 60.94% | 47.94% | 192 | 194 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0921632' χ2 p-value for Mo17 x B73: '3.14e-08' Biased in favor of strain: '' |
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| GRMZM2G148118 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.193143 x 10-1 | 41 | 14 | 22 | 37 | 74.55% | 62.71% | 55 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2151714' χ2 p-value for Mo17 x B73: '.5193143' Biased in favor of strain: '' |
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| GRMZM2G148118 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.30954 x 10-1 | 99 | 62 | 75 | 81 | 61.49% | 51.92% | 161 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0035454' χ2 p-value for Mo17 x B73: '.630954' Biased in favor of strain: '' |
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| GRMZM2G148106 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 6 | 4 | 0 | 33.33% | 0.00% | 9 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G148106 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 1 | 2 | 4 | 91.67% | 66.67% | 12 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0661941' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G148098 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.060476 x 10-1 | 38 | 11 | 41 | 6 | 77.55% | 12.77% | 49 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1060476' χ2 p-value for Mo17 x B73: '4.55e-15' Biased in favor of strain: '' |
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| GRMZM2G148098 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.25 x 10-5 | 32 | 7 | 36 | 3 | 82.05% | 7.69% | 39 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000625' χ2 p-value for Mo17 x B73: '1.26e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G148087 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.857506 x 10-1 | 18 | 25 | 16 | 7 | 41.86% | 30.43% | 43 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2857506' χ2 p-value for Mo17 x B73: '.0605689' Biased in favor of strain: '' |
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| GRMZM2G148087 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.911817 x 10-1 | 13 | 4 | 0 | 12 | 76.47% | 100.00% | 17 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3911817' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G148074 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G148074 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.16 x 10-6 | 262 | 153 | 246 | 156 | 63.13% | 38.81% | 415 | 402 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.77e-08' χ2 p-value for Mo17 x B73: '7.16e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G148060 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 94 | 94 | 83 | 99 | 50.00% | 54.40% | 188 | 182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2356227' Biased in favor of strain: '' |
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| GRMZM2G148060 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0909 x 10-3 | 26 | 1 | 20 | 1 | 96.30% | 4.76% | 27 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010909' χ2 p-value for Mo17 x B73: '1.77e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G148057 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.51 x 10-25 | 367 | 37 | 153 | 55 | 90.84% | 26.44% | 404 | 208 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.51e-25' χ2 p-value for Mo17 x B73: '8.38e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G148057 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.72 x 10-18 | 366 | 167 | 349 | 120 | 68.67% | 25.59% | 533 | 469 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.72e-18' χ2 p-value for Mo17 x B73: '3.92e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G148056 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.5087 x 10-3 | 25 | 4 | 13 | 2 | 86.21% | 13.33% | 29 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000964' χ2 p-value for Mo17 x B73: '.0045087' Biased in favor of strain: 'B73' |
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| GRMZM2G148056 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 8 | 5 | 80.00% | 38.46% | 5 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.030984' Biased in favor of strain: '' |
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| GRMZM2G148052 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 4 | 0.00% | 100.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G148052 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G148022 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.23 x 10-12 | 71 | 1 | 59 | 4 | 98.61% | 6.35% | 72 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.59e-16' χ2 p-value for Mo17 x B73: '4.23e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G148022 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G147966 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.589057 x 10-1 | 506 | 259 | 360 | 661 | 66.14% | 64.74% | 765 | 1021 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7589057' χ2 p-value for Mo17 x B73: '.1916737' Biased in favor of strain: '' |
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| GRMZM2G147966 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.69962 x 10-2 | 227 | 178 | 191 | 234 | 56.05% | 55.06% | 405 | 425 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0148988' χ2 p-value for Mo17 x B73: '.0369962' Biased in favor of strain: '' |
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| GRMZM2G147961 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.920615 x 10-1 | 81 | 55 | 53 | 49 | 59.56% | 48.04% | 136 | 102 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0257819' χ2 p-value for Mo17 x B73: '.6920615' Biased in favor of strain: '' |
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| GRMZM2G147961 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.58474 x 10-2 | 105 | 37 | 66 | 80 | 73.94% | 54.79% | 142 | 146 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0658474' χ2 p-value for Mo17 x B73: '.0023418' Biased in favor of strain: '' |
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| GRMZM2G147955 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.649876 x 10-1 | 15 | 9 | 0 | 23 | 62.50% | 100.00% | 24 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6649876' χ2 p-value for Mo17 x B73: '.000696' Biased in favor of strain: '' |
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| GRMZM2G147955 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.621255 x 10-1 | 26 | 33 | 15 | 32 | 44.07% | 68.09% | 59 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3621255' χ2 p-value for Mo17 x B73: '.0131491' Biased in favor of strain: '' |
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| GRMZM2G147942 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.017876 x 10-1 | 293 | 198 | 297 | 294 | 59.67% | 49.75% | 491 | 591 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000181' χ2 p-value for Mo17 x B73: '.9017876' Biased in favor of strain: '' |
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| GRMZM2G147942 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.18881 x 10-2 | 351 | 133 | 154 | 364 | 72.52% | 70.27% | 484 | 518 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0062969' χ2 p-value for Mo17 x B73: '.0818881' Biased in favor of strain: '' |
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| GRMZM2G147920 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.01367 x 10-2 | 20 | 1 | 16 | 14 | 95.24% | 46.67% | 21 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0054788' χ2 p-value for Mo17 x B73: '.0201367' Biased in favor of strain: '' |
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| GRMZM2G147920 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.2 x 10-5 | 40 | 9 | 37 | 10 | 81.63% | 21.28% | 49 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.49e-06' χ2 p-value for Mo17 x B73: '.000082' Biased in favor of strain: 'B73' |
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| GRMZM2G147910 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.25 x 10-14 | 56 | 0 | 56 | 0 | 100.00% | 0.00% | 56 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.25e-14' χ2 p-value for Mo17 x B73: '7.25e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G147910 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.64 x 10-7 | 53 | 0 | 18 | 0 | 100.00% | 0.00% | 53 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.64e-07' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G147894 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.816402 x 10-1 | 93 | 54 | 38 | 93 | 63.27% | 70.99% | 147 | 131 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3816402' χ2 p-value for Mo17 x B73: '.2935972' Biased in favor of strain: '' |
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| GRMZM2G147894 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.316006 x 10-1 | 70 | 66 | 85 | 69 | 51.47% | 44.81% | 136 | 154 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7316006' χ2 p-value for Mo17 x B73: '.197288' Biased in favor of strain: '' |
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| GRMZM2G147891 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.55 x 10-5 | 289 | 147 | 145 | 84 | 66.28% | 36.68% | 436 | 229 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.04e-11' χ2 p-value for Mo17 x B73: '.0000555' Biased in favor of strain: 'B73' |
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| GRMZM2G147891 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.541279 x 10-1 | 138 | 55 | 111 | 147 | 71.50% | 56.98% | 193 | 258 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1541279' χ2 p-value for Mo17 x B73: '.000961' Biased in favor of strain: '' |
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| GRMZM2G147885 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.94 x 10-9 | 22 | 46 | 121 | 18 | 32.35% | 12.95% | 68 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.94e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G147885 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.68 x 10-4 | 266 | 186 | 255 | 132 | 58.85% | 34.11% | 452 | 387 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000168' χ2 p-value for Mo17 x B73: '4.04e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G147884 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.23335 x 10-1 | 181 | 193 | 199 | 192 | 48.40% | 49.10% | 374 | 391 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5349252' χ2 p-value for Mo17 x B73: '.723335' Biased in favor of strain: '' |
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| GRMZM2G147884 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.016992 x 10-1 | 121 | 34 | 98 | 172 | 78.06% | 63.70% | 155 | 270 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026112' χ2 p-value for Mo17 x B73: '.3016992' Biased in favor of strain: '' |
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| GRMZM2G147882 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.59 x 10-11 | 715 | 217 | 430 | 427 | 76.72% | 49.82% | 932 | 857 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.59e-11' χ2 p-value for Mo17 x B73: '1.34e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G147882 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.83 x 10-5 | 402 | 276 | 366 | 264 | 59.29% | 41.90% | 678 | 630 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.30e-06' χ2 p-value for Mo17 x B73: '.0000483' Biased in favor of strain: 'B73' |
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| GRMZM2G147880 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 104 | 44 | 44 | 44 | 70.27% | 50.00% | 148 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.14e-07' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G147880 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.299 x 10-4 | 103 | 23 | 50 | 38 | 81.75% | 43.18% | 126 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003299' χ2 p-value for Mo17 x B73: '2.96e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G147867 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 4 | 2 | 66.67% | 33.33% | 3 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
|||||
| GRMZM2G147867 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 6 | 6 | 3 | 7 | 50.00% | 70.00% | 12 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G147862 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9049 x 10-2 | 127 | 67 | 90 | 63 | 65.46% | 41.18% | 194 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000165' χ2 p-value for Mo17 x B73: '.029049' Biased in favor of strain: 'B73' |
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| GRMZM2G147862 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15 x 10-6 | 168 | 35 | 106 | 101 | 82.76% | 48.79% | 203 | 207 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.15e-06' χ2 p-value for Mo17 x B73: '4.89e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G147857 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.40586 x 10-2 | 166 | 31 | 31 | 34 | 84.26% | 52.31% | 197 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.61e-07' χ2 p-value for Mo17 x B73: '.0140586' Biased in favor of strain: '' |
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| GRMZM2G147857 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.29 x 10-23 | 658 | 340 | 652 | 337 | 65.93% | 34.07% | 998 | 989 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.80e-24' χ2 p-value for Mo17 x B73: '1.29e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G147856 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.665 x 10-4 | 97 | 54 | 84 | 41 | 64.24% | 32.80% | 151 | 125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004665' χ2 p-value for Mo17 x B73: '.00012' Biased in favor of strain: 'B73' |
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| GRMZM2G147856 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.8513 x 10-3 | 94 | 23 | 43 | 48 | 80.34% | 52.75% | 117 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017021' χ2 p-value for Mo17 x B73: '.0048513' Biased in favor of strain: 'B73' |
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| GRMZM2G147854 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.025693 x 10-1 | 536 | 263 | 274 | 290 | 67.08% | 51.42% | 799 | 564 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8025693' χ2 p-value for Mo17 x B73: '1.57e-14' Biased in favor of strain: '' |
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| GRMZM2G147854 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.2772 x 10-3 | 353 | 265 | 246 | 189 | 57.12% | 43.45% | 618 | 435 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004003' χ2 p-value for Mo17 x B73: '.0062772' Biased in favor of strain: 'B73' |
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| GRMZM2G147849 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.83 x 10-7 | 991 | 458 | 726 | 545 | 68.39% | 42.88% | 1449 | 1271 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.83e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G147849 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.74 x 10-10 | 4502 | 1894 | 2530 | 4036 | 70.39% | 61.47% | 6396 | 6566 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.74e-10' χ2 p-value for Mo17 x B73: '4.04e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G147840 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G147840 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.088094 x 10-1 | 23 | 5 | 10 | 4 | 82.14% | 28.57% | 28 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006697' χ2 p-value for Mo17 x B73: '.1088094' Biased in favor of strain: '' |
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| GRMZM2G147819 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.24 x 10-7 | 109 | 33 | 92 | 35 | 76.76% | 27.56% | 142 | 127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.80e-10' χ2 p-value for Mo17 x B73: '4.24e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G147819 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.810747 x 10-1 | 37 | 11 | 23 | 51 | 77.08% | 68.92% | 48 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1257933' χ2 p-value for Mo17 x B73: '.6810747' Biased in favor of strain: '' |
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| GRMZM2G147811 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.118 x 10-4 | 65 | 9 | 29 | 9 | 87.84% | 23.68% | 74 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001118' χ2 p-value for Mo17 x B73: '1.90e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G147811 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.607 x 10-4 | 34 | 3 | 25 | 5 | 91.89% | 16.67% | 37 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.46e-07' χ2 p-value for Mo17 x B73: '.0002607' Biased in favor of strain: 'B73' |
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| GRMZM2G147809 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.33422 x 10-2 | 7 | 23 | 8 | 20 | 23.33% | 71.43% | 30 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.003487' χ2 p-value for Mo17 x B73: '.0233422' Biased in favor of strain: 'Mo17' |
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| GRMZM2G147809 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.1699 x 10-3 | 10 | 23 | 10 | 50 | 30.30% | 83.33% | 33 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.37e-06' χ2 p-value for Mo17 x B73: '.0061699' Biased in favor of strain: 'Mo17' |
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| GRMZM2G147804 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 13 | 11 | 100.00% | 45.83% | 4 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0303828' Biased in favor of strain: '' |
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| GRMZM2G147804 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.62 x 10-8 | 231 | 129 | 205 | 81 | 64.17% | 28.32% | 360 | 286 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.62e-08' χ2 p-value for Mo17 x B73: '2.26e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G147780 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.21 x 10-11 | 196 | 87 | 192 | 64 | 69.26% | 25.00% | 283 | 256 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.21e-11' χ2 p-value for Mo17 x B73: '1.24e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G147780 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.386 x 10-4 | 27 | 0 | 40 | 10 | 100.00% | 20.00% | 27 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002386' χ2 p-value for Mo17 x B73: '2.56e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G147775 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.59 x 10-8 | 121 | 16 | 106 | 16 | 88.32% | 13.11% | 137 | 122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.59e-08' χ2 p-value for Mo17 x B73: '4.10e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G147775 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.962534 x 10-1 | 8 | 7 | 4 | 7 | 53.33% | 63.64% | 15 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7962534' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G147772 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929801 x 10-1 | 6 | 8 | 10 | 5 | 42.86% | 33.33% | 14 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: '' |
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| GRMZM2G147772 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 1 | 0 | 100.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G147756 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518449 x 10-1 | 14 | 6 | 25 | 33 | 70.00% | 56.90% | 20 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518449' χ2 p-value for Mo17 x B73: '.1144713' Biased in favor of strain: '' |
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| GRMZM2G147756 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.549441 x 10-1 | 715 | 732 | 679 | 707 | 49.41% | 51.01% | 1447 | 1386 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6549441' χ2 p-value for Mo17 x B73: '.4519901' Biased in favor of strain: '' |
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| GRMZM2G147752 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 9 | 3 | 0 | 62.50% | 0.00% | 24 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206714' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G147752 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |