GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G148925	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.93 x 10^-14	109	22	146	26	83.21%	15.12%	131	172	RefGen V2	χ2 p-value for B73 x Mo17: '2.93e-14' χ2 p-value for Mo17 x B73: '5.70e-20' Biased in favor of strain: 'B73'
GRMZM2G148925	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.53 x 10^-8	98	9	65	15	91.59%	18.75%	107	80	RefGen V2	χ2 p-value for B73 x Mo17: '4.53e-08' χ2 p-value for Mo17 x B73: '9.76e-20' Biased in favor of strain: 'B73'
GRMZM2G148924	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	3.5 x 10^-29	2	122	85	13	1.61%	13.27%	124	98	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.47e-29' Biased in favor of strain: ''
GRMZM2G148924	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.597243 x 10^-1	243	275	198	230	46.91%	53.74%	518	428	RefGen V2	χ2 p-value for B73 x Mo17: '.1597243' χ2 p-value for Mo17 x B73: '.1219167' Biased in favor of strain: ''
GRMZM2G148913	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.67 x 10^-9	572	384	536	356	59.83%	39.91%	956	892	RefGen V2	χ2 p-value for B73 x Mo17: '1.20e-09' χ2 p-value for Mo17 x B73: '1.67e-09' Biased in favor of strain: 'B73'
GRMZM2G148913	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.69 x 10^-5	341	93	155	196	78.57%	55.84%	434	351	RefGen V2	χ2 p-value for B73 x Mo17: '1.43e-07' χ2 p-value for Mo17 x B73: '.0000169' Biased in favor of strain: 'B73'
GRMZM2G148908	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.701412 x 10^-1	86	36	60	80	70.49%	57.14%	122	140	RefGen V2	χ2 p-value for B73 x Mo17: '.3701412' χ2 p-value for Mo17 x B73: '.0168274' Biased in favor of strain: ''
GRMZM2G148908	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.373948 x 10^-1	66	50	90	62	56.90%	40.79%	116	152	RefGen V2	χ2 p-value for B73 x Mo17: '.1373948' χ2 p-value for Mo17 x B73: '.0231409' Biased in favor of strain: ''
GRMZM2G148896	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.7775 x 10^-3	200	116	182	132	63.29%	42.04%	316	314	RefGen V2	χ2 p-value for B73 x Mo17: '2.30e-06' χ2 p-value for Mo17 x B73: '.0047775' Biased in favor of strain: 'B73'
GRMZM2G148896	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.40085 x 10^-2	217	133	142	230	62.00%	61.83%	350	372	RefGen V2	χ2 p-value for B73 x Mo17: '.0640085' χ2 p-value for Mo17 x B73: '.0477331' Biased in favor of strain: ''
GRMZM2G148884	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G148884	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	0	66.67%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G148872	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.864762 x 10^-1	21	27	10	17	43.75%	62.96%	48	27	RefGen V2	χ2 p-value for B73 x Mo17: '.3864762' χ2 p-value for Mo17 x B73: '.1779317' Biased in favor of strain: ''
GRMZM2G148872	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	2	0	9	75.00%	100.00%	8	9	RefGen V2	χ2 p-value for B73 x Mo17: '.6170834' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM2G148867	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.780535 x 10^-1	56	29	23	31	65.88%	57.41%	85	54	RefGen V2	χ2 p-value for B73 x Mo17: '.8780535' χ2 p-value for Mo17 x B73: '.1489146' Biased in favor of strain: ''
GRMZM2G148867	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	20	17	11	11	54.05%	50.00%	37	22	RefGen V2	χ2 p-value for B73 x Mo17: '.6218734' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G148864	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	40	40	51	53	50.00%	50.96%	80	104	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.8445193' Biased in favor of strain: ''
GRMZM2G148864	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	6	2	0.00%	25.00%	2	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: ''
GRMZM2G148855	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.444016 x 10^-1	456	214	249	384	68.06%	60.66%	670	633	RefGen V2	χ2 p-value for B73 x Mo17: '.4444016' χ2 p-value for Mo17 x B73: '.0013555' Biased in favor of strain: ''
GRMZM2G148855	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.29648 x 10^-2	87	53	65	88	62.14%	57.52%	140	153	RefGen V2	χ2 p-value for B73 x Mo17: '.0040592' χ2 p-value for Mo17 x B73: '.0629648' Biased in favor of strain: ''
GRMZM2G148831	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.3 x 10^-8	332	200	309	187	62.41%	37.70%	532	496	RefGen V2	χ2 p-value for B73 x Mo17: '1.05e-08' χ2 p-value for Mo17 x B73: '4.30e-08' Biased in favor of strain: 'B73'
GRMZM2G148831	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.02427 x 10^-2	104	34	73	60	75.36%	45.11%	138	133	RefGen V2	χ2 p-value for B73 x Mo17: '.0302427' χ2 p-value for Mo17 x B73: '1.34e-07' Biased in favor of strain: ''
GRMZM2G148811	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.841915 x 10^-1	32	23	19	41	58.18%	68.33%	55	60	RefGen V2	χ2 p-value for B73 x Mo17: '.1819133' χ2 p-value for Mo17 x B73: '.7841915' Biased in favor of strain: ''
GRMZM2G148811	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.14151 x 10^-2	118	65	86	60	64.48%	41.10%	183	146	RefGen V2	χ2 p-value for B73 x Mo17: '.0000893' χ2 p-value for Mo17 x B73: '.0314151' Biased in favor of strain: 'B73'
GRMZM2G148810	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.773705 x 10^-1	85	83	99	79	50.60%	44.38%	168	178	RefGen V2	χ2 p-value for B73 x Mo17: '.8773705' χ2 p-value for Mo17 x B73: '.1338572' Biased in favor of strain: ''
GRMZM2G148810	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.56398 x 10^-2	149	113	166	279	56.87%	62.70%	262	445	RefGen V2	χ2 p-value for B73 x Mo17: '.0007686' χ2 p-value for Mo17 x B73: '.0756398' Biased in favor of strain: ''
GRMZM2G148807	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.710757 x 10^-1	24	16	7	23	60.00%	76.67%	40	30	RefGen V2	χ2 p-value for B73 x Mo17: '.3710757' χ2 p-value for Mo17 x B73: '.2452782' Biased in favor of strain: ''
GRMZM2G148807	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.7447 x 10^-3	114	59	98	65	65.90%	39.88%	173	163	RefGen V2	χ2 p-value for B73 x Mo17: '.000029' χ2 p-value for Mo17 x B73: '.0097447' Biased in favor of strain: 'B73'
GRMZM2G148800	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.410348 x 10^-1	235	225	215	159	51.09%	42.51%	460	374	RefGen V2	χ2 p-value for B73 x Mo17: '.6410348' χ2 p-value for Mo17 x B73: '.0037832' Biased in favor of strain: ''
GRMZM2G148800	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	2		40.00%	0	5	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G148796	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.206822 x 10^-1	36	12	10	34	75.00%	77.27%	48	44	RefGen V2	χ2 p-value for B73 x Mo17: '.2206822' χ2 p-value for Mo17 x B73: '.1355931' Biased in favor of strain: ''
GRMZM2G148796	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.314059 x 10^-1	58	48	49	31	54.72%	38.75%	106	80	RefGen V2	χ2 p-value for B73 x Mo17: '.3314059' χ2 p-value for Mo17 x B73: '.0441713' Biased in favor of strain: ''
GRMZM2G148790	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G148790	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	0	0	60.00%		5	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G148783	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.779154 x 10^-1	190	100	74	167	65.52%	69.29%	290	241	RefGen V2	χ2 p-value for B73 x Mo17: '.6779154' χ2 p-value for Mo17 x B73: '.3868053' Biased in favor of strain: ''
GRMZM2G148783	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2163	1441	2164	1337	60.02%	38.19%	3604	3501	RefGen V2	χ2 p-value for B73 x Mo17: '2.57e-33' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G148773	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.51494 x 10^-1	53	28	29	41	65.43%	58.57%	81	70	RefGen V2	χ2 p-value for B73 x Mo17: '.0054732' χ2 p-value for Mo17 x B73: '.151494' Biased in favor of strain: ''
GRMZM2G148773	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.897067 x 10^-1	20	24	9	17	45.45%	65.38%	44	26	RefGen V2	χ2 p-value for B73 x Mo17: '.0028372' χ2 p-value for Mo17 x B73: '.8897067' Biased in favor of strain: ''
GRMZM2G148751	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03649 x 10^-1	108	40	50	71	72.97%	58.68%	148	121	RefGen V2	χ2 p-value for B73 x Mo17: '.103649' χ2 p-value for Mo17 x B73: '.0622949' Biased in favor of strain: ''
GRMZM2G148751	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.827832 x 10^-1	141	98	91	93	59.00%	50.54%	239	184	RefGen V2	χ2 p-value for B73 x Mo17: '.0054119' χ2 p-value for Mo17 x B73: '.8827832' Biased in favor of strain: ''
GRMZM2G148744	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	12391	5952	12398	5730	67.55%	31.61%	18343	18128	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G148744	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	11057	2752	5736	5252	80.07%	47.80%	13809	10988	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G148723	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.153492 x 10^-1	265	134	144	206	66.42%	58.86%	399	350	RefGen V2	χ2 p-value for B73 x Mo17: '.9153492' χ2 p-value for Mo17 x B73: '.0019397' Biased in favor of strain: ''
GRMZM2G148723	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.087794 x 10^-1	260	127	178	149	67.18%	45.57%	387	327	RefGen V2	χ2 p-value for B73 x Mo17: '1.37e-11' χ2 p-value for Mo17 x B73: '.1087794' Biased in favor of strain: ''
GRMZM2G148721	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	2	3	50.00%	60.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G148721	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	1	1	0.00%	50.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G148709	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.45 x 10^-20	267	23	158	62	92.07%	28.18%	290	220	RefGen V2	χ2 p-value for B73 x Mo17: '4.45e-20' χ2 p-value for Mo17 x B73: '9.47e-34' Biased in favor of strain: 'B73'
GRMZM2G148709	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5 x 10^-29	256	13	154	10	95.17%	6.10%	269	164	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.46e-29' Biased in favor of strain: 'B73'
GRMZM2G148702	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.86 x 10^-9	339	202	322	151	62.66%	31.92%	541	473	RefGen V2	χ2 p-value for B73 x Mo17: '3.86e-09' χ2 p-value for Mo17 x B73: '3.76e-15' Biased in favor of strain: 'B73'
GRMZM2G148702	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.844346 x 10^-1	321	126	132	235	71.81%	64.03%	447	367	RefGen V2	χ2 p-value for B73 x Mo17: '.0210207' χ2 p-value for Mo17 x B73: '.2844346' Biased in favor of strain: ''
GRMZM2G148633	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.590767 x 10^-1	65	50	42	53	56.52%	55.79%	115	95	RefGen V2	χ2 p-value for B73 x Mo17: '.1618858' χ2 p-value for Mo17 x B73: '.2590767' Biased in favor of strain: ''
GRMZM2G148633	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.340739 x 10^-1	49	24	32	40	67.12%	55.56%	73	72	RefGen V2	χ2 p-value for B73 x Mo17: '.9340739' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G148621	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	16		94.12%	0	17	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G148621	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	0	4	25.00%	100.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G148594	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	1	3	0.00%	75.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G148594	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	6	2	5	50.00%	71.43%	12	7	RefGen V2	χ2 p-value for B73 x Mo17: '.2206636' χ2 p-value for Mo17 x B73: '.7892681' Biased in favor of strain: ''
GRMZM2G148561	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	24	20	100.00%	45.45%	9	44	RefGen V2	χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.0028375' Biased in favor of strain: ''
GRMZM2G148561	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.02 x 10^-7	161	82	131	47	66.26%	26.40%	243	178	RefGen V2	χ2 p-value for B73 x Mo17: '4.02e-07' χ2 p-value for Mo17 x B73: '3.05e-10' Biased in favor of strain: 'B73'
GRMZM2G148555	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.73 x 10^-13	1272	931	1200	832	57.74%	40.94%	2203	2032	RefGen V2	χ2 p-value for B73 x Mo17: '3.73e-13' χ2 p-value for Mo17 x B73: '3.25e-16' Biased in favor of strain: 'B73'
GRMZM2G148555	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.435188 x 10^-1	629	298	396	606	67.85%	60.48%	927	1002	RefGen V2	χ2 p-value for B73 x Mo17: '.4435188' χ2 p-value for Mo17 x B73: '.0000325' Biased in favor of strain: ''
GRMZM2G148538	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	3.999 x 10^-4	1311	784	846	1452	62.58%	63.19%	2095	2298	RefGen V2	χ2 p-value for B73 x Mo17: '.0000717' χ2 p-value for Mo17 x B73: '.0003999' Biased in favor of strain: ''
GRMZM2G148538	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1824	837	1482	813	68.55%	35.42%	2661	2295	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G148536	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.863 x 10^-4	2437	2183	2319	2024	52.75%	46.60%	4620	4343	RefGen V2	χ2 p-value for B73 x Mo17: '.0001863' χ2 p-value for Mo17 x B73: '7.59e-06' Biased in favor of strain: 'B73'
GRMZM2G148536	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.99999 x 10^-1	241	176	154	308	57.79%	66.67%	417	462	RefGen V2	χ2 p-value for B73 x Mo17: '.0001212' χ2 p-value for Mo17 x B73: '.999999' Biased in favor of strain: ''
GRMZM2G148532	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.53473 x 10^-2	0	13	0	10	0.00%	100.00%	13	10	RefGen V2	χ2 p-value for B73 x Mo17: '3.41e-07' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G148532	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.482131 x 10^-1	8	4	4	9	66.67%	69.23%	12	13	RefGen V2	χ2 p-value for B73 x Mo17: '.2482131' χ2 p-value for Mo17 x B73: '.1655179' Biased in favor of strain: ''
GRMZM2G148506	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.49 x 10^-15	0	60	1	64	0.00%	98.46%	60	65	RefGen V2	χ2 p-value for B73 x Mo17: '9.49e-15' χ2 p-value for Mo17 x B73: '5.53e-15' Biased in favor of strain: 'Mo17'
GRMZM2G148506	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.206636 x 10^-1	6	6	0	22	50.00%	100.00%	12	22	RefGen V2	χ2 p-value for B73 x Mo17: '.2206636' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: ''
GRMZM2G148499	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	4	6	80.00%	60.00%	5	10	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.6547207' Biased in favor of strain: ''
GRMZM2G148499	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	3	1	1	70.00%	50.00%	10	2	RefGen V2	χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G148495	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.980247 x 10^-1	15	20	12	23	42.86%	65.71%	35	35	RefGen V2	χ2 p-value for B73 x Mo17: '.3980247' χ2 p-value for Mo17 x B73: '.062979' Biased in favor of strain: ''
GRMZM2G148495	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05449 x 10^-2	32	5	17	3	86.49%	15.00%	37	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0105449' χ2 p-value for Mo17 x B73: '9.51e-07' Biased in favor of strain: ''
GRMZM2G148492	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173106 x 10^-1	12	2	4	14	85.71%	77.78%	14	18	RefGen V2	χ2 p-value for B73 x Mo17: '.1305732' χ2 p-value for Mo17 x B73: '.3173106' Biased in favor of strain: ''
GRMZM2G148492	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.136267 x 10^-1	46	41	43	42	52.87%	49.41%	87	85	RefGen V2	χ2 p-value for B73 x Mo17: '.5919197' χ2 p-value for Mo17 x B73: '.9136267' Biased in favor of strain: ''
GRMZM2G148485	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.27 x 10^-4	56	100	53	201	35.90%	79.13%	156	254	RefGen V2	χ2 p-value for B73 x Mo17: '.000427' χ2 p-value for Mo17 x B73: '1.60e-20' Biased in favor of strain: 'Mo17'
GRMZM2G148485	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	717	705	319	1345	50.42%	80.83%	1422	1664	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-38' χ2 p-value for Mo17 x B73: '1.57e-34' Biased in favor of strain: 'Mo17'
GRMZM2G148475	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G148475	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	0	5	0	100.00%	0.00%	10	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G148467	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.43122 x 10^-2	72	45	120	93	61.54%	43.66%	117	213	RefGen V2	χ2 p-value for B73 x Mo17: '.0125549' χ2 p-value for Mo17 x B73: '.0643122' Biased in favor of strain: ''
GRMZM2G148467	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G148460	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.711473 x 10^-1	13	6	7	10	68.42%	58.82%	19	17	RefGen V2	χ2 p-value for B73 x Mo17: '.8711473' χ2 p-value for Mo17 x B73: '.4927165' Biased in favor of strain: ''
GRMZM2G148460	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.02 x 10^-16	26	126	33	146	17.11%	81.56%	152	179	RefGen V2	χ2 p-value for B73 x Mo17: '5.02e-16' χ2 p-value for Mo17 x B73: '3.01e-17' Biased in favor of strain: 'Mo17'
GRMZM2G148404	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.189 x 10^-4	262	181	296	174	59.14%	37.02%	443	470	RefGen V2	χ2 p-value for B73 x Mo17: '.0001189' χ2 p-value for Mo17 x B73: '1.83e-08' Biased in favor of strain: 'B73'
GRMZM2G148404	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.259829 x 10^-1	90	33	21	8	73.17%	27.59%	123	29	RefGen V2	χ2 p-value for B73 x Mo17: '.1259829' χ2 p-value for Mo17 x B73: '8.03e-06' Biased in favor of strain: ''
GRMZM2G148370	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.132769 x 10^-1	564	314	332	620	64.24%	65.13%	878	952	RefGen V2	χ2 p-value for B73 x Mo17: '.1266561' χ2 p-value for Mo17 x B73: '.3132769' Biased in favor of strain: ''
GRMZM2G148370	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.680197 x 10^-1	340	275	270	303	55.28%	52.88%	615	573	RefGen V2	χ2 p-value for B73 x Mo17: '.0087659' χ2 p-value for Mo17 x B73: '.1680197' Biased in favor of strain: ''
GRMZM2G148323	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.355 x 10^-4	700	455	431	326	60.61%	43.06%	1155	757	RefGen V2	χ2 p-value for B73 x Mo17: '5.64e-13' χ2 p-value for Mo17 x B73: '.0001355' Biased in favor of strain: 'B73'
GRMZM2G148323	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.16 x 10^-9	1120	399	638	878	73.73%	57.92%	1519	1516	RefGen V2	χ2 p-value for B73 x Mo17: '5.16e-09' χ2 p-value for Mo17 x B73: '4.90e-13' Biased in favor of strain: 'B73'
GRMZM2G148281	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.789878 x 10^-1	47	26	32	43	64.38%	57.33%	73	75	RefGen V2	χ2 p-value for B73 x Mo17: '.6789878' χ2 p-value for Mo17 x B73: '.0864106' Biased in favor of strain: ''
GRMZM2G148281	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.76 x 10^-8	152	55	150	67	73.43%	30.88%	207	217	RefGen V2	χ2 p-value for B73 x Mo17: '1.56e-11' χ2 p-value for Mo17 x B73: '1.76e-08' Biased in favor of strain: 'B73'
GRMZM2G148277	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.91 x 10^-4	53	18	74	36	74.65%	32.73%	71	110	RefGen V2	χ2 p-value for B73 x Mo17: '.0000327' χ2 p-value for Mo17 x B73: '.000291' Biased in favor of strain: 'B73'
GRMZM2G148277	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	6	1	100.00%	14.29%	9	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: ''
GRMZM2G148272	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.163842 x 10^-1	48	28	9	42	63.16%	82.35%	76	51	RefGen V2	χ2 p-value for B73 x Mo17: '.5163842' χ2 p-value for Mo17 x B73: '.0174847' Biased in favor of strain: ''
GRMZM2G148272	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.316006 x 10^-1	16	18	18	11	47.06%	37.93%	34	29	RefGen V2	χ2 p-value for B73 x Mo17: '.7316006' χ2 p-value for Mo17 x B73: '.1936464' Biased in favor of strain: ''
GRMZM2G148249	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.935403 x 10^-1	78	83	94	83	48.45%	46.89%	161	177	RefGen V2	χ2 p-value for B73 x Mo17: '.6935403' χ2 p-value for Mo17 x B73: '.4083444' Biased in favor of strain: ''
GRMZM2G148249	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.434122 x 10^-1	13	8	33	11	61.90%	25.00%	21	44	RefGen V2	χ2 p-value for B73 x Mo17: '.6434122' χ2 p-value for Mo17 x B73: '4.55e-09' Biased in favor of strain: ''
GRMZM2G148229	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.187577 x 10^-1	61	24	40	50	71.76%	55.56%	85	90	RefGen V2	χ2 p-value for B73 x Mo17: '.3187577' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G148229	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.91099 x 10^-2	103	72	96	59	58.86%	38.06%	175	155	RefGen V2	χ2 p-value for B73 x Mo17: '.0191099' χ2 p-value for Mo17 x B73: '.0029595' Biased in favor of strain: 'B73'
GRMZM2G148216	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.886378 x 10^-1	17	21	25	26	44.74%	50.98%	38	51	RefGen V2	χ2 p-value for B73 x Mo17: '.5164123' χ2 p-value for Mo17 x B73: '.8886378' Biased in favor of strain: ''
GRMZM2G148216	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	3	7	100.00%	70.00%	5	10	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.8230634' Biased in favor of strain: ''

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