Displaying data sets 14201 - 14300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G46490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46470 RPS6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.63887 x 10-1 25 13 14 23 65.79% 62.16% 38 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001647'
Avg. expression score for this sample: '31.431'
Avg. expression score in LCM sample: '11.8465'
Tissue used: 'pure endosperm, no chalazal'
AT5G46470 RPS6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.59 x 10-4 167 48 34 135 77.67% 79.88% 215 169 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001647'
Avg. expression score for this sample: '88.2135'
Avg. expression score in LCM sample: '11.8465'
Tissue used: 'full endosperm'
AT5G46470 RPS6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.23544 x 10-1 32 20 9 3 61.54% 25.00% 52 12 TAIR8 Avg. embryo expression (dissected): '31.5833'
Avg. embryo expression (LCM): '8.82868'
AT5G46470 RPS6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.671 x 10-3 14 14 50.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46470 RPS6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.974 x 10-3 97 14 87.39% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46470 RPS6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8902 x 10-2 107 20 84.25% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.27386 x 10-1 12 1 1 6 92.31% 85.71% 13 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.1286'
Avg. expression score in LCM sample: '7.0256'
Tissue used: 'pure endosperm, no chalazal'
AT5G46460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.49897 x 10-1 5 9 2 7 35.71% 77.78% 14 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '31.4408'
Avg. expression score in LCM sample: '7.0256'
Tissue used: 'full endosperm'
AT5G46460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.37524 x 10-1 3 14 2 4 17.65% 66.67% 17 6 TAIR8 Avg. embryo expression (dissected): '66.3153'
Avg. embryo expression (LCM): '59.4021'
AT5G46460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.18182 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.754 x 10-3 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.28308 x 10-1 4 3 4 2 57.14% 33.33% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.204548'
Avg. expression score for this sample: '3.14423'
Avg. expression score in LCM sample: '6.98151'
Tissue used: 'pure endosperm, no chalazal'
AT5G46450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.15265 x 10-1 17 15 7 12 53.12% 63.16% 32 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.204548'
Avg. expression score for this sample: '9.57179'
Avg. expression score in LCM sample: '6.98151'
Tissue used: 'full endosperm'
AT5G46450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.37688 x 10-1 9 6 0 3 60.00% 100.00% 15 3 TAIR8 Avg. embryo expression (dissected): '5.4389'
Avg. embryo expression (LCM): '6.34208'
AT5G46450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.16783 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.1746 x 10-2 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.84 x 10-4 20 1 95.24% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.57308'
Avg. expression score in LCM sample: '20.1802'
Tissue used: 'pure endosperm, no chalazal'
AT5G46440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.366'
Avg. expression score in LCM sample: '20.1802'
Tissue used: 'full endosperm'
AT5G46440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '27.6167'
Avg. embryo expression (LCM): '46.7807'
AT5G46440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 3 2 6 50.00% 75.00% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688998'
Avg. expression score for this sample: '521.907'
Avg. expression score in LCM sample: '442.407'
Tissue used: 'pure endosperm, no chalazal'
AT5G46430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.71885 x 10-1 40 8 26 42 83.33% 61.76% 48 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688998'
Avg. expression score for this sample: '525.218'
Avg. expression score in LCM sample: '442.407'
Tissue used: 'full endosperm'
AT5G46430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.43374 x 10-1 7 14 0 1 33.33% 100.00% 21 1 TAIR8 Avg. embryo expression (dissected): '1085.14'
Avg. embryo expression (LCM): '1934.18'
AT5G46430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.55267 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.0141 x 10-2 96 22 81.36% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.77383 x 10-1 75 37 66.96% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 9 5 8 64.00% 61.54% 25 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.810941'
Avg. expression score for this sample: '52.2177'
Avg. expression score in LCM sample: '14.3011'
Tissue used: 'pure endosperm, no chalazal'
AT5G46420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.4952 42 9 27 44 82.35% 61.97% 51 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.810941'
Avg. expression score for this sample: '99.1149'
Avg. expression score in LCM sample: '14.3011'
Tissue used: 'full endosperm'
AT5G46420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.31689 x 10-1 54 33 14 11 62.07% 44.00% 87 25 TAIR8 Avg. embryo expression (dissected): '163.411'
Avg. embryo expression (LCM): '170.42'
AT5G46420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.57034 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1114 x 10-1 36 21 63.16% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-9 77 1 98.72% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46417 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.3964'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46417 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.38183'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46417 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 2 1 100.00% 33.33% 1 3 TAIR8 Avg. embryo expression (dissected): '23.5853'
Avg. embryo expression (LCM): '0'
AT5G46417 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46417 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46417 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46410 SSP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.57919 x 10-1 77 43 53 105 64.17% 66.46% 120 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100153'
Avg. expression score for this sample: '72.7363'
Avg. expression score in LCM sample: '26.5885'
Tissue used: 'pure endosperm, no chalazal'
AT5G46410 SSP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.25 x 10-3 92 25 47 142 78.63% 75.13% 117 189 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100153'
Avg. expression score for this sample: '84.2453'
Avg. expression score in LCM sample: '26.5885'
Tissue used: 'full endosperm'
AT5G46410 SSP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.21638 x 10-1 37 37 18 30 50.00% 62.50% 74 48 TAIR8 Avg. embryo expression (dissected): '52.6339'
Avg. embryo expression (LCM): '29.6257'
AT5G46410 SSP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8 x 10-5 77 7 91.67% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46410 SSP4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0001 149 25 85.63% 174 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46410 SSP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-19 372 26 93.47% 398 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46400 PRP39-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.94158 x 10-1 52 17 24 35 75.36% 59.32% 69 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.348713'
Avg. expression score for this sample: '75.0096'
Avg. expression score in LCM sample: '36.4361'
Tissue used: 'pure endosperm, no chalazal'
AT5G46400 PRP39-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.45514 x 10-1 123 38 55 100 76.40% 64.52% 161 155 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.348713'
Avg. expression score for this sample: '104.883'
Avg. expression score in LCM sample: '36.4361'
Tissue used: 'full endosperm'
AT5G46400 PRP39-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.5626 x 10-2 81 34 20 12 70.43% 37.50% 115 32 TAIR8 Avg. embryo expression (dissected): '121.018'
Avg. embryo expression (LCM): '64.212'
AT5G46400 PRP39-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.05231 x 10-1 24 5 82.76% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46400 PRP39-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.88777 x 10-1 125 46 73.10% 171 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46400 PRP39-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-16 305 24 92.71% 329 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.777097'
Avg. expression score for this sample: '10.6081'
Avg. expression score in LCM sample: '5.02669'
Tissue used: 'pure endosperm, no chalazal'
AT5G46390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 2 6 11 77.78% 64.71% 9 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.777097'
Avg. expression score for this sample: '24.8401'
Avg. expression score in LCM sample: '5.02669'
Tissue used: 'full endosperm'
AT5G46390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 1 2 40.00% 66.67% 5 3 TAIR8 Avg. embryo expression (dissected): '25.8957'
Avg. embryo expression (LCM): '17.1801'
AT5G46390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.03226 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.19383 x 10-1 25 20 55.56% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.76825 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.424061'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.3009'
Avg. embryo expression (LCM): '1.38144'
AT5G46380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46370 KCO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.541171'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46370 KCO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.39596'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46370 KCO2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.406328'
Avg. embryo expression (LCM): '.8791'
AT5G46370 KCO2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46370 KCO2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46370 KCO2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46360 KCO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46360 KCO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.14997'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46360 KCO3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G46360 KCO3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46360 KCO3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46360 KCO3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46350 WRKY8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.68813 x 10-1 8 9 1 7 47.06% 87.50% 17 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681853'
Avg. expression score for this sample: '22.3409'
Avg. expression score in LCM sample: '2.24878'
Tissue used: 'pure endosperm, no chalazal'
AT5G46350 WRKY8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.39871 x 10-1 36 14 13 33 72.00% 71.74% 50 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681853'
Avg. expression score for this sample: '40.9547'
Avg. expression score in LCM sample: '2.24878'
Tissue used: 'full endosperm'
AT5G46350 WRKY8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '.444937'
Avg. embryo expression (LCM): '0'
AT5G46350 WRKY8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46350 WRKY8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0941 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46350 WRKY8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.65329 x 10-1 23 8 74.19% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46340 RWA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '48.2272'
Avg. expression score in LCM sample: '44.3436'
Tissue used: 'pure endosperm, no chalazal'
AT5G46340 RWA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '76.9696'
Avg. expression score in LCM sample: '44.3436'
Tissue used: 'full endosperm'
AT5G46340 RWA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '23.5126'
Avg. embryo expression (LCM): '11.3027'
AT5G46340 RWA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46340 RWA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46340 RWA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46330 FLS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.418507'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46330 FLS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.26334'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46330 FLS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.355725'
Avg. embryo expression (LCM): '0'
AT5G46330 FLS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46330 FLS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.375 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46330 FLS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46325 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46325 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'