Displaying data sets 142201 - 142300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G53520 FAP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.8 x 10-10 450 828 91 135 35.21% 59.73% 1278 226 TAIR8 Avg. embryo expression (dissected): '964.251'
Avg. embryo expression (LCM): '881.298'
AT1G53520 FAP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.56684 x 10-1 260 192 213 495 57.52% 69.92% 452 708 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.166081'
Avg. expression score for this sample: '421.05'
Avg. expression score in LCM sample: '178.991'
Tissue used: 'full endosperm'
AT1G53520 FAP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.57811 x 10-1 264 241 145 429 52.28% 74.74% 505 574 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.166081'
Avg. expression score for this sample: '545.886'
Avg. expression score in LCM sample: '178.991'
Tissue used: 'pure endosperm, no chalazal'
AT1G53520 FAP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4482 x 10-2 40 10 80.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53520 FAP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8039 x 10-2 69 21 76.67% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53520 FAP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.81761 x 10-1 39 17 69.64% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53510 MPK18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.12 x 10-4 127 24 84.11% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53510 MPK18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.517 x 10-3 56 8 87.50% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53510 MPK18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4 x 10-9 84 3 96.55% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53510 MPK18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 84 138 48 101 37.84% 67.79% 222 149 TAIR8 Avg. embryo expression (dissected): '354.841'
Avg. embryo expression (LCM): '131.413'
AT1G53510 MPK18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.03556 x 10-1 115 54 44 144 68.05% 76.60% 169 188 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.263913'
Avg. expression score for this sample: '176.533'
Avg. expression score in LCM sample: '39.0671'
Tissue used: 'pure endosperm, no chalazal'
AT1G53510 MPK18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 98 82 45 155 54.44% 77.50% 180 200 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.263913'
Avg. expression score for this sample: '225.587'
Avg. expression score in LCM sample: '39.0671'
Tissue used: 'full endosperm'
AT1G53500 MUM4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '710.787'
Avg. expression score in LCM sample: '110.102'
Tissue used: 'full endosperm'
AT1G53500 MUM4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '804.515'
Avg. expression score in LCM sample: '110.102'
Tissue used: 'pure endosperm, no chalazal'
AT1G53500 MUM4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53500 MUM4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53500 MUM4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53500 MUM4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '220.416'
Avg. embryo expression (LCM): '91.5897'
AT1G53490 HEI10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.79752 x 10-1 132 83 48 27 61.40% 36.00% 215 75 TAIR8 Avg. embryo expression (dissected): '268.171'
Avg. embryo expression (LCM): '129.517'
AT1G53490 HEI10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.35462 x 10-1 89 30 58 40 74.79% 40.82% 119 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.194161'
Avg. expression score for this sample: '105.114'
Avg. expression score in LCM sample: '58.189'
Tissue used: 'pure endosperm, no chalazal'
AT1G53490 HEI10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 32 2 37 42 94.12% 53.16% 34 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.194161'
Avg. expression score for this sample: '52.9917'
Avg. expression score in LCM sample: '58.189'
Tissue used: 'full endosperm'
AT1G53490 HEI10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.5 x 10-12 265 46 85.21% 311 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53490 HEI10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.03182 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53490 HEI10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.05085 x 10-1 99 49 66.89% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53480 MRD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4 x 10-9 50 0 100.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53480 MRD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.8675 x 10-2 29 26 52.73% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53480 MRD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-13 208 22 90.43% 230 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53480 MRD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0097 x 10-2 0 90 0 47 0.00% 100.00% 90 47 TAIR8 Avg. embryo expression (dissected): '849.339'
Avg. embryo expression (LCM): '1197.17'
AT1G53480 MRD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.30547 x 10-1 4 45 3 108 8.16% 97.30% 49 111 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.639286'
Avg. expression score for this sample: '444.138'
Avg. expression score in LCM sample: '384.615'
Tissue used: 'full endosperm'
AT1G53480 MRD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.57317 x 10-1 6 72 8 118 7.69% 93.65% 78 126 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.639286'
Avg. expression score for this sample: '723.442'
Avg. expression score in LCM sample: '384.615'
Tissue used: 'pure endosperm, no chalazal'
AT1G53470 MSL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.972449'
Avg. expression score in LCM sample: '.558521'
Tissue used: 'pure endosperm, no chalazal'
AT1G53470 MSL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.21372'
Avg. expression score in LCM sample: '.558521'
Tissue used: 'full endosperm'
AT1G53470 MSL4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53470 MSL4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53470 MSL4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53470 MSL4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.6732'
Avg. embryo expression (LCM): '10.9385'
AT1G53460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.62855 x 10-1 18 21 10 5 46.15% 33.33% 39 15 TAIR8 Avg. embryo expression (dissected): '269.852'
Avg. embryo expression (LCM): '191.757'
AT1G53460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.29585 x 10-1 41 8 30 57 83.67% 65.52% 49 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.421517'
Avg. expression score for this sample: '257.614'
Avg. expression score in LCM sample: '27.2352'
Tissue used: 'full endosperm'
AT1G53460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 19 5 8 9 79.17% 52.94% 24 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.421517'
Avg. expression score for this sample: '120.655'
Avg. expression score in LCM sample: '27.2352'
Tissue used: 'pure endosperm, no chalazal'
AT1G53460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.42585 x 10-1 184 68 73.02% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.7 x 10-8 232 22 91.34% 254 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 0 0 75.00% 4 0 TAIR8 Avg. embryo expression (dissected): '29.5512'
Avg. embryo expression (LCM): '18.1723'
AT1G53450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.224503'
Avg. expression score for this sample: '7.35222'
Avg. expression score in LCM sample: '2.74851'
Tissue used: 'pure endosperm, no chalazal'
AT1G53450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4472 x 10-1 4 0 2 7 100.00% 77.78% 4 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.224503'
Avg. expression score for this sample: '9.48593'
Avg. expression score in LCM sample: '2.74851'
Tissue used: 'full endosperm'
AT1G53440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 1 3 100.00% 75.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.75591'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G53440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 0 66.67% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.76941'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G53440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.20496 x 10-1 42 3 93.33% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77087 x 10-1 19 9 5 2 67.86% 28.57% 28 7 TAIR8 Avg. embryo expression (dissected): '50.5051'
Avg. embryo expression (LCM): '18.7248'
AT1G53430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 8 1 2 38.46% 66.67% 13 3 TAIR8 Avg. embryo expression (dissected): '45.6891'
Avg. embryo expression (LCM): '10.5618'
AT1G53430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '2.018'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G53430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3932 x 10-2 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 2 0.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '7.22119'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G53430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.35 12 7 63.16% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 1 3 1 0 25.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '1.75158'
Avg. embryo expression (LCM): '0'
AT1G53420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 5 0 0 1 100.00% 100.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.1817'
Avg. expression score in LCM sample: '.514427'
Tissue used: 'full endosperm'
AT1G53420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.4 0 3 0 0 0.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.82078'
Avg. expression score in LCM sample: '.514427'
Tissue used: 'pure endosperm, no chalazal'
AT1G53420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 54 29 65.06% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G53410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G53410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G53400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '32.528'
Avg. embryo expression (LCM): '42.4731'
AT1G53400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '38.0872'
Avg. expression score in LCM sample: '28.3964'
Tissue used: 'pure endosperm, no chalazal'
AT1G53400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '64.2315'
Avg. expression score in LCM sample: '28.3964'
Tissue used: 'full endosperm'
AT1G53400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53390 ABCG24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5796 x 10-2 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53390 ABCG24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.10831 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53390 ABCG24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 2 5 2 1 28.57% 33.33% 7 3 TAIR8 Avg. embryo expression (dissected): '58.1917'
Avg. embryo expression (LCM): '63.5715'
AT1G53390 ABCG24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.89587 x 10-1 21 12 15 57 63.64% 79.17% 33 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.533513'
Avg. expression score for this sample: '139.25'
Avg. expression score in LCM sample: '719.772'
Tissue used: 'full endosperm'
AT1G53390 ABCG24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 65 28 34 58 69.89% 63.04% 93 92 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.533513'
Avg. expression score for this sample: '271.082'
Avg. expression score in LCM sample: '719.772'
Tissue used: 'pure endosperm, no chalazal'
AT1G53390 ABCG24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 43 21 16 33 67.19% 67.35% 64 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.909752'
Avg. expression score for this sample: '186.21'
Avg. expression score in LCM sample: '51.6338'
Tissue used: 'full endosperm'
AT1G53380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 9 11 27 64.00% 71.05% 25 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.909752'
Avg. expression score for this sample: '135.39'
Avg. expression score in LCM sample: '51.6338'
Tissue used: 'pure endosperm, no chalazal'
AT1G53380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.58025 x 10-1 18 12 2 7 60.00% 77.78% 30 9 TAIR8 Avg. embryo expression (dissected): '160.644'
Avg. embryo expression (LCM): '161.742'
AT1G53370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G53370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.481078'
Avg. expression score in LCM sample: '1.3816'
Tissue used: 'pure endosperm, no chalazal'
AT1G53370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 9 30.77% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.156781'
Avg. expression score in LCM sample: '1.3816'
Tissue used: 'full endosperm'
AT1G53370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53366 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53366 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53366 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G53366 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'