Displaying data sets 142001 - 142100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G53780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6168 x 10-2 84 22 34 15 79.25% 30.61% 106 49 TAIR8 Avg. embryo expression (dissected): '63.7321'
Avg. embryo expression (LCM): '42.3852'
AT1G53780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.09283 x 10-1 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.70068 x 10-1 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7337 x 10-1 3 7 5 1 30.00% 16.67% 10 6 TAIR8 Avg. embryo expression (dissected): '79.1888'
Avg. embryo expression (LCM): '49.3678'
AT1G53770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.925 x 10-3 44 11 7 50 80.00% 87.72% 55 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004438'
Avg. expression score for this sample: '108.982'
Avg. expression score in LCM sample: '33.2467'
Tissue used: 'full endosperm'
AT1G53770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.84973 x 10-1 12 5 3 12 70.59% 80.00% 17 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004438'
Avg. expression score for this sample: '79.9693'
Avg. expression score in LCM sample: '33.2467'
Tissue used: 'pure endosperm, no chalazal'
AT1G53770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.82772 x 10-1 50 6 89.29% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8 x 10-7 120 1 99.17% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.54971 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 0 1 50.00% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '7.23191'
Avg. embryo expression (LCM): '9.77057'
AT1G53760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.30444 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.56902'
Avg. expression score in LCM sample: '2.54274'
Tissue used: 'pure endosperm, no chalazal'
AT1G53760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.35117 x 10-1 1 1 1 8 50.00% 88.89% 2 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.42891'
Avg. expression score in LCM sample: '2.54274'
Tissue used: 'full endosperm'
AT1G53750 RPT1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.4136 x 10-2 55 20 38 128 73.33% 77.11% 75 166 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.20604'
Avg. expression score for this sample: '1291.34'
Avg. expression score in LCM sample: '848.305'
Tissue used: 'full endosperm'
AT1G53750 RPT1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.08876 x 10-1 9 12 11 15 42.86% 57.69% 21 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.20604'
Avg. expression score for this sample: '1669.33'
Avg. expression score in LCM sample: '848.305'
Tissue used: 'pure endosperm, no chalazal'
AT1G53750 RPT1A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.812 x 10-2 211 52 80.23% 263 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53750 RPT1A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-8 254 28 90.07% 282 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53750 RPT1A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.55486 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53750 RPT1A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 14 1 3 44.00% 75.00% 25 4 TAIR8 Avg. embryo expression (dissected): '2127.03'
Avg. embryo expression (LCM): '1327.96'
AT1G53730 SRF6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.39015 x 10-1 64 46 28 25 58.18% 47.17% 110 53 TAIR8 Avg. embryo expression (dissected): '83.0224'
Avg. embryo expression (LCM): '43.5406'
AT1G53730 SRF6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 20 12 62.50% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53730 SRF6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.277 x 10-3 26 3 89.66% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53730 SRF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.3131 x 10-2 59 48 43 69 55.14% 61.61% 107 112 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.181736'
Avg. expression score for this sample: '70.6198'
Avg. expression score in LCM sample: '17.3876'
Tissue used: 'pure endosperm, no chalazal'
AT1G53730 SRF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.20188 x 10-1 70 38 38 77 64.81% 66.96% 108 115 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.181736'
Avg. expression score for this sample: '56.2126'
Avg. expression score in LCM sample: '17.3876'
Tissue used: 'full endosperm'
AT1G53730 SRF6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7 x 10-8 80 9 89.89% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53720 CYP59 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.652 x 10-3 93 18 83.78% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53720 CYP59 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.78622 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53720 CYP59 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54117 x 10-1 19 12 5 4 61.29% 44.44% 31 9 TAIR8 Avg. embryo expression (dissected): '1180.54'
Avg. embryo expression (LCM): '600.074'
AT1G53720 CYP59 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.59314 x 10-1 64 20 54 105 76.19% 66.04% 84 159 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.47607'
Avg. expression score for this sample: '585.444'
Avg. expression score in LCM sample: '130.429'
Tissue used: 'full endosperm'
AT1G53720 CYP59 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.25139 x 10-1 15 7 7 18 68.18% 72.00% 22 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.47607'
Avg. expression score for this sample: '1061.75'
Avg. expression score in LCM sample: '130.429'
Tissue used: 'pure endosperm, no chalazal'
AT1G53720 CYP59 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.82 x 10-4 89 12 88.12% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.32983 x 10-1 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 2 66.67% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.320891'
Avg. expression score for this sample: '69.9137'
Avg. expression score in LCM sample: '25.8389'
Tissue used: 'pure endosperm, no chalazal'
AT1G53710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.31989 x 10-1 6 1 1 11 85.71% 91.67% 7 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.320891'
Avg. expression score for this sample: '66.3865'
Avg. expression score in LCM sample: '25.8389'
Tissue used: 'full endosperm'
AT1G53710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.76263 x 10-1 11 5 68.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 5 0 0 44.44% 9 0 TAIR8 Avg. embryo expression (dissected): '70.8135'
Avg. embryo expression (LCM): '45.4997'
AT1G53710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53708 RTFL9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53708 RTFL9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G53708 RTFL9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G53708 RTFL9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G53708 RTFL9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53708 RTFL9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53705 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53705 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G53705 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53705 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53705 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G53705 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G53700 WAG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '69.4122'
Avg. expression score in LCM sample: '25.9565'
Tissue used: 'full endosperm'
AT1G53700 WAG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '95.3724'
Avg. expression score in LCM sample: '25.9565'
Tissue used: 'pure endosperm, no chalazal'
AT1G53700 WAG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53700 WAG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53700 WAG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53700 WAG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '99.39'
Avg. embryo expression (LCM): '80.4879'
AT1G53690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.07618'
Avg. embryo expression (LCM): '0'
AT1G53690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '66.2507'
Avg. expression score in LCM sample: '48.5913'
Tissue used: 'pure endosperm, no chalazal'
AT1G53690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '81.5811'
Avg. expression score in LCM sample: '48.5913'
Tissue used: 'full endosperm'
AT1G53690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53687 MIR169E endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53687 MIR169E endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53687 MIR169E embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G53687 MIR169E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G53687 MIR169E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G53687 MIR169E endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53683 MIR169D endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53683 MIR169D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G53683 MIR169D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G53683 MIR169D endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53683 MIR169D embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G53683 MIR169D endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53680 GSTU28 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.6269 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53680 GSTU28 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 1 2 1 5 33.33% 83.33% 3 6 TAIR8 Avg. embryo expression (dissected): '37.542'
Avg. embryo expression (LCM): '7.45979'
AT1G53680 GSTU28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 12 2 5 3 85.71% 37.50% 14 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.1395'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G53680 GSTU28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 3 66.67% 100.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.6675'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G53680 GSTU28 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.6269 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53680 GSTU28 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.99362 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53670 MSRB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.5 x 10-6 43 1 97.73% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53670 MSRB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.18311 x 10-1 19 37 6 5 33.93% 45.45% 56 11 TAIR8 Avg. embryo expression (dissected): '138.968'
Avg. embryo expression (LCM): '50.5483'
AT1G53670 MSRB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.24406 x 10-1 30 12 71.43% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53670 MSRB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.27 x 10-4 39 3 92.86% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53670 MSRB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.00771 x 10-1 38 28 17 60 57.58% 77.92% 66 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.860485'
Avg. expression score for this sample: '208.38'
Avg. expression score in LCM sample: '46.2249'
Tissue used: 'pure endosperm, no chalazal'
AT1G53670 MSRB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 38 36 14 62 51.35% 81.58% 74 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.860485'
Avg. expression score for this sample: '169.806'
Avg. expression score in LCM sample: '46.2249'
Tissue used: 'full endosperm'
AT1G53660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.4108'
Avg. expression score in LCM sample: '9.34787'
Tissue used: 'full endosperm'
AT1G53660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.8239'
Avg. expression score in LCM sample: '9.34787'
Tissue used: 'pure endosperm, no chalazal'
AT1G53660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.884'
Avg. embryo expression (LCM): '1.33121'
AT1G53650 CID8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 6 2 2 50.00% 50.00% 12 4 TAIR8 Avg. embryo expression (dissected): '16.666'
Avg. embryo expression (LCM): '15.9996'
AT1G53650 CID8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.23972 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53650 CID8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.665 x 10-3 59 54 52.21% 113 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53650 CID8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.84078 x 10-1 9 0 4 8 100.00% 66.67% 9 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.351629'
Avg. expression score for this sample: '13.7095'
Avg. expression score in LCM sample: '10.8471'
Tissue used: 'pure endosperm, no chalazal'
AT1G53650 CID8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.25023 x 10-1 29 5 17 24 85.29% 58.54% 34 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.351629'
Avg. expression score for this sample: '24.1285'
Avg. expression score in LCM sample: '10.8471'
Tissue used: 'full endosperm'
AT1G53650 CID8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.84622 x 10-1 61 15 80.26% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53645 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.44166 x 10-1 182 47 79.48% 229 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G53645 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0282 x 10-1 18 3 85.71% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'