Displaying data sets 14101 - 14200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G46640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.77234 x 10-1 9 8 4 6 52.94% 60.00% 17 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.048461'
Avg. expression score for this sample: '35.2776'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'pure endosperm, no chalazal'
AT5G46640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3569 x 10-2 18 28 16 32 39.13% 66.67% 46 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.048461'
Avg. expression score for this sample: '55.0302'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'full endosperm'
AT5G46640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57582 x 10-1 33 33 12 6 50.00% 33.33% 66 18 TAIR8 Avg. embryo expression (dissected): '227.793'
Avg. embryo expression (LCM): '145.441'
AT5G46640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9186 x 10-1 18 8 69.23% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8741 x 10-2 38 14 73.08% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.35616 x 10-1 283 75 133 213 79.05% 61.56% 358 346 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000183'
Avg. expression score for this sample: '126.637'
Avg. expression score in LCM sample: '92.6998'
Tissue used: 'pure endosperm, no chalazal'
AT5G46630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3 x 10-4 455 104 234 467 81.40% 66.62% 559 701 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000183'
Avg. expression score for this sample: '171.998'
Avg. expression score in LCM sample: '92.6998'
Tissue used: 'full endosperm'
AT5G46630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.77619 x 10-1 220 188 49 47 53.92% 48.96% 408 96 TAIR8 Avg. embryo expression (dissected): '121.626'
Avg. embryo expression (LCM): '92.8958'
AT5G46630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3 x 10-5 100 11 90.09% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.882 x 10-3 374 104 78.24% 478 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 918 33 96.53% 951 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.00811 x 10-1 42 19 14 46 68.85% 76.67% 61 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012634'
Avg. expression score for this sample: '249.821'
Avg. expression score in LCM sample: '67.6986'
Tissue used: 'pure endosperm, no chalazal'
AT5G46620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9033 x 10-2 77 30 37 134 71.96% 78.36% 107 171 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012634'
Avg. expression score for this sample: '420.635'
Avg. expression score in LCM sample: '67.6986'
Tissue used: 'full endosperm'
AT5G46620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.92851 x 10-1 51 42 13 10 54.84% 43.48% 93 23 TAIR8 Avg. embryo expression (dissected): '401.264'
Avg. embryo expression (LCM): '190.237'
AT5G46620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.95273 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.10092 x 10-1 104 36 74.29% 140 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-10 170 8 95.51% 178 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.861376'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.420803'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.351647'
Avg. embryo expression (LCM): '0'
AT5G46610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 4 0 1 50.00% 100.00% 8 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-10'
Avg. expression score for this sample: '1.90571'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.7 x 10-13 50 1 0 68 98.04% 100.00% 51 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-10'
Avg. expression score for this sample: '15.8486'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 11 7 1 0 61.11% 0.00% 18 1 TAIR8 Avg. embryo expression (dissected): '5.64228'
Avg. embryo expression (LCM): '3.32802'
AT5G46600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46595 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46595 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46595 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G46595 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46595 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46595 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46590 NAC096 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46590 NAC096 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46590 NAC096 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.229322'
Avg. embryo expression (LCM): '.992128'
AT5G46590 NAC096 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46590 NAC096 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46590 NAC096 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.91448 x 10-1 25 23 5 14 52.08% 73.68% 48 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.9e-06'
Avg. expression score for this sample: '205.93'
Avg. expression score in LCM sample: '76.826'
Tissue used: 'pure endosperm, no chalazal'
AT5G46580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.4 x 10-6 39 74 68 88 34.51% 56.41% 113 156 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.9e-06'
Avg. expression score for this sample: '304.121'
Avg. expression score in LCM sample: '76.826'
Tissue used: 'full endosperm'
AT5G46580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.15805 x 10-1 75 117 15 34 39.06% 69.39% 192 49 TAIR8 Avg. embryo expression (dissected): '1189.55'
Avg. embryo expression (LCM): '1249.01'
AT5G46580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3 x 10-4 31 7 81.58% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-10 86 16 84.31% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-8 113 35 76.35% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46570 BSK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.26652 x 10-1 21 17 10 23 55.26% 69.70% 38 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.746937'
Avg. expression score for this sample: '38.6141'
Avg. expression score in LCM sample: '43.6087'
Tissue used: 'pure endosperm, no chalazal'
AT5G46570 BSK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 30 20 21 49 60.00% 70.00% 50 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.746937'
Avg. expression score for this sample: '46.47'
Avg. expression score in LCM sample: '43.6087'
Tissue used: 'full endosperm'
AT5G46570 BSK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 24 24 17 18 50.00% 51.43% 48 35 TAIR8 Avg. embryo expression (dissected): '96.4936'
Avg. embryo expression (LCM): '97.0024'
AT5G46570 BSK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.28161 x 10-1 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46570 BSK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.62131 x 10-1 25 10 71.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46570 BSK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.14502 x 10-1 24 8 75.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.234'
Avg. expression score in LCM sample: '10.7883'
Tissue used: 'pure endosperm, no chalazal'
AT5G46560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.6802'
Avg. expression score in LCM sample: '10.7883'
Tissue used: 'full endosperm'
AT5G46560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.302'
Avg. embryo expression (LCM): '16.7531'
AT5G46560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 42 18 19 35 70.00% 64.81% 60 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013818'
Avg. expression score for this sample: '45.6172'
Avg. expression score in LCM sample: '28.8079'
Tissue used: 'pure endosperm, no chalazal'
AT5G46550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.525 x 10-3 109 40 65 213 73.15% 76.62% 149 278 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013818'
Avg. expression score for this sample: '118.049'
Avg. expression score in LCM sample: '28.8079'
Tissue used: 'full endosperm'
AT5G46550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.94715 x 10-1 32 59 11 17 35.16% 60.71% 91 28 TAIR8 Avg. embryo expression (dissected): '72.2456'
Avg. embryo expression (LCM): '77.4487'
AT5G46550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.58088 x 10-1 22 4 84.62% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5841 x 10-1 93 23 80.17% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0 x 10-5 161 22 87.98% 183 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46540 ABCB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.52 x 10-3 191 25 69 104 88.43% 60.12% 216 173 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '34.1962'
Avg. expression score in LCM sample: '17.711'
Tissue used: 'pure endosperm, no chalazal'
AT5G46540 ABCB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 496 6 25 241 98.80% 90.60% 502 266 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '60.6612'
Avg. expression score in LCM sample: '17.711'
Tissue used: 'full endosperm'
AT5G46540 ABCB7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.02595 x 10-1 57 38 23 10 60.00% 30.30% 95 33 TAIR8 Avg. embryo expression (dissected): '17.344'
Avg. embryo expression (LCM): '2.34845'
AT5G46540 ABCB7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.7192 x 10-2 41 0 100.00% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46540 ABCB7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1288 1160 52.61% 2448 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46540 ABCB7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7 x 10-6 2375 468 83.54% 2843 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G46530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.4565 x 10-2 36 2 3 0 94.74% 0.00% 38 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001124'
Avg. expression score for this sample: '7.23451'
Avg. expression score in LCM sample: '2.55744'
Tissue used: 'pure endosperm, no chalazal'
AT5G46520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3144 x 10-2 71 4 10 1 94.67% 9.09% 75 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001124'
Avg. expression score for this sample: '13.604'
Avg. expression score in LCM sample: '2.55744'
Tissue used: 'full endosperm'
AT5G46520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.8 x 10-4 24 2 0 1 92.31% 100.00% 26 1 TAIR8 Avg. embryo expression (dissected): '6.07333'
Avg. embryo expression (LCM): '1.56982'
AT5G46520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5625 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.091 x 10-2 9 7 56.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.5 x 10-6 107 0 100.00% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '82.6128'
Avg. expression score in LCM sample: '15.9472'
Tissue used: 'pure endosperm, no chalazal'
AT5G46510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '123.958'
Avg. expression score in LCM sample: '15.9472'
Tissue used: 'full endosperm'
AT5G46510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '151.29'
Avg. embryo expression (LCM): '56.388'
AT5G46510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 0 1 0 100.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.8465'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 3 6 11 66.67% 64.71% 9 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.18047'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 4 2 0 55.56% 0.00% 9 2 TAIR8 Avg. embryo expression (dissected): '3.04428'
Avg. embryo expression (LCM): '0'
AT5G46500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.90801 x 10-1 16 10 61.54% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.41635 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G46490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G46490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.951623'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G46490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G46490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'