Displaying data sets 140901 - 141000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G55525 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G55525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.46893'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.523915'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55525 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55520 TBP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.63 x 10-4 94 12 88.68% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55520 TBP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80129 x 10-1 7 5 3 8 58.33% 72.73% 12 11 TAIR8 Avg. embryo expression (dissected): '35.3478'
Avg. embryo expression (LCM): '23.0952'
AT1G55520 TBP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55520 TBP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.87393 x 10-1 61 15 80.26% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55520 TBP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.14568 x 10-1 64 36 29 116 64.00% 80.00% 100 145 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.14898'
Avg. expression score for this sample: '94.505'
Avg. expression score in LCM sample: '4.9091'
Tissue used: 'full endosperm'
AT1G55520 TBP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 7 8 14 69.57% 63.64% 23 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.14898'
Avg. expression score for this sample: '39.7904'
Avg. expression score in LCM sample: '4.9091'
Tissue used: 'pure endosperm, no chalazal'
AT1G55510 BCDH BETA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 4 3 11 60.00% 78.57% 10 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.042923'
Avg. expression score for this sample: '37.6977'
Avg. expression score in LCM sample: '4.233'
Tissue used: 'pure endosperm, no chalazal'
AT1G55510 BCDH BETA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1355 x 10-2 26 2 5 21 92.86% 80.77% 28 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.042923'
Avg. expression score for this sample: '32.6834'
Avg. expression score in LCM sample: '4.233'
Tissue used: 'full endosperm'
AT1G55510 BCDH BETA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8763 x 10-2 43 2 95.56% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55510 BCDH BETA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.89488 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55510 BCDH BETA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.61215 x 10-1 7 9 0 7 43.75% 100.00% 16 7 TAIR8 Avg. embryo expression (dissected): '43.9101'
Avg. embryo expression (LCM): '26.1972'
AT1G55510 BCDH BETA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55500 ECT4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.2778 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55500 ECT4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.00278 x 10-1 28 6 82.35% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55500 ECT4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 11 5 5 47.62% 50.00% 21 10 TAIR8 Avg. embryo expression (dissected): '45.1404'
Avg. embryo expression (LCM): '62.8934'
AT1G55500 ECT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.5231 x 10-2 12 4 6 32 75.00% 84.21% 16 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.112724'
Avg. expression score for this sample: '20.7397'
Avg. expression score in LCM sample: '34.4225'
Tissue used: 'full endosperm'
AT1G55500 ECT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 2 5 10 80.00% 66.67% 10 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.112724'
Avg. expression score for this sample: '25.9731'
Avg. expression score in LCM sample: '34.4225'
Tissue used: 'pure endosperm, no chalazal'
AT1G55500 ECT4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3295 x 10-2 47 3 94.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55490 CPN60B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-7 193 45 81.09% 238 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55490 CPN60B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.3809 x 10-2 791 619 144 103 56.10% 41.70% 1410 247 TAIR8 Avg. embryo expression (dissected): '1322.03'
Avg. embryo expression (LCM): '1658.93'
AT1G55490 CPN60B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 47 26 64.38% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55490 CPN60B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 47 26 64.38% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55490 CPN60B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.59392 x 10-1 230 121 65 111 65.53% 63.07% 351 176 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.253847'
Avg. expression score for this sample: '283.997'
Avg. expression score in LCM sample: '146.832'
Tissue used: 'pure endosperm, no chalazal'
AT1G55490 CPN60B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.73006 x 10-1 154 94 161 304 62.10% 65.38% 248 465 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.253847'
Avg. expression score for this sample: '200.012'
Avg. expression score in LCM sample: '146.832'
Tissue used: 'full endosperm'
AT1G55480 ZKT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.37428 x 10-1 6 1 7 5 85.71% 41.67% 7 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.536507'
Avg. expression score for this sample: '211.359'
Avg. expression score in LCM sample: '56.146'
Tissue used: 'full endosperm'
AT1G55480 ZKT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 2 0 100.00% 0.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.536507'
Avg. expression score for this sample: '169.72'
Avg. expression score in LCM sample: '56.146'
Tissue used: 'pure endosperm, no chalazal'
AT1G55480 ZKT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.92754 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55480 ZKT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55480 ZKT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 0 0 75.00% 4 0 TAIR8 Avg. embryo expression (dissected): '228.591'
Avg. embryo expression (LCM): '211.662'
AT1G55480 ZKT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55475 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55475 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55475 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.640405'
Avg. expression score for this sample: '4.3723'
Avg. expression score in LCM sample: '6.48178'
Tissue used: 'pure endosperm, no chalazal'
AT1G55475 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.35117 x 10-1 5 1 1 4 83.33% 80.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.640405'
Avg. expression score for this sample: '12.7778'
Avg. expression score in LCM sample: '6.48178'
Tissue used: 'full endosperm'
AT1G55475 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55475 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 6 0 1 0 100.00% 0.00% 6 1 TAIR8 Avg. embryo expression (dissected): '7.4934'
Avg. embryo expression (LCM): '1.84611'
AT1G55460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.62027 x 10-1 840 879 222 240 48.87% 51.95% 1719 462 TAIR8 Avg. embryo expression (dissected): '3398.51'
Avg. embryo expression (LCM): '1153.51'
AT1G55460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3893 606 86.53% 4499 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9 x 10-9 2815 746 79.05% 3561 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.75118 x 10-1 382 143 72.76% 525 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 2360 699 1020 3181 77.15% 75.72% 3059 4201 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-34'
Avg. expression score for this sample: '3892.07'
Avg. expression score in LCM sample: '670.254'
Tissue used: 'full endosperm'
AT1G55460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.471 x 10-3 1251 570 550 1374 68.70% 71.41% 1821 1924 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-34'
Avg. expression score for this sample: '3495.26'
Avg. expression score in LCM sample: '670.254'
Tissue used: 'pure endosperm, no chalazal'
AT1G55450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 1 100.00% 33.33% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.504297'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3999 x 10-2 84 3 96.55% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 1 1 3 0 50.00% 0.00% 2 3 TAIR8 Avg. embryo expression (dissected): '4.37415'
Avg. embryo expression (LCM): '0'
AT1G55450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5934 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 6 0 1 5 100.00% 83.33% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '1.06494'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 0 1 0 5 0.00% 100.00% 1 5 TAIR8 Avg. embryo expression (dissected): '1.49948'
Avg. embryo expression (LCM): '0'
AT1G55440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1591 x 10-1 0 17 0 5 0.00% 100.00% 17 5 TAIR8 Avg. embryo expression (dissected): '3.88248'
Avg. embryo expression (LCM): '.640487'
AT1G55430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.95729 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.92075 x 10-1 0 4 0 3 0.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.29019'
Avg. expression score for this sample: '.915951'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.6497 x 10-2 6 15 0 51 28.57% 100.00% 21 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.29019'
Avg. expression score for this sample: '5.57517'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55420 EDA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.66922'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55420 EDA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.06005'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55420 EDA11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.00875'
Avg. embryo expression (LCM): '.577695'
AT1G55420 EDA11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55420 EDA11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55420 EDA11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.885'
Avg. expression score in LCM sample: '5.42353'
Tissue used: 'pure endosperm, no chalazal'
AT1G55390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.7398'
Avg. expression score in LCM sample: '5.42353'
Tissue used: 'full endosperm'
AT1G55390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.45075'
Avg. embryo expression (LCM): '.577695'
AT1G55380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.95185'
Avg. embryo expression (LCM): '5.06111'
AT1G55380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.64666'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.21454'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55370 NDF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.23606'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55370 NDF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.43951'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55370 NDF5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55370 NDF5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '30.9643'
Avg. embryo expression (LCM): '25.3432'
AT1G55370 NDF5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55370 NDF5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55365 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55365 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55365 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.90451'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55365 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.72063'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55365 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.52801'
Avg. embryo expression (LCM): '0'
AT1G55365 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.15296 x 10-1 33 24 57.89% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.34824 x 10-1 353 274 182 139 56.30% 43.30% 627 321 TAIR8 Avg. embryo expression (dissected): '1191.07'
Avg. embryo expression (LCM): '836.301'
AT1G55360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.8464 x 10-2 43 38 53.09% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6958 x 10-2 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.60244 x 10-1 104 49 50 85 67.97% 62.96% 153 135 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.558998'
Avg. expression score for this sample: '253.477'
Avg. expression score in LCM sample: '186.399'
Tissue used: 'pure endosperm, no chalazal'
AT1G55360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.94122 x 10-1 154 76 100 170 66.96% 62.96% 230 270 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.558998'
Avg. expression score for this sample: '479.387'
Avg. expression score in LCM sample: '186.399'
Tissue used: 'full endosperm'