| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G46800 | BOU | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.64176 x 10-1 | 80 | 89 | 15 | 16 | 47.34% | 51.61% | 169 | 31 | TAIR8 |
Avg. embryo expression (dissected): '80.7259' Avg. embryo expression (LCM): '74.711' |
|||
| AT5G46800 | BOU | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.74851 x 10-1 | 43 | 6 | 87.76% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46800 | BOU | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.8836 x 10-1 | 221 | 45 | 83.08% | 266 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46800 | BOU | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.6423 x 10-2 | 199 | 33 | 85.78% | 232 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46795 | MSP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46795 | MSP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.88747' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G46795 | MSP2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT5G46795 | MSP2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46795 | MSP2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46795 | MSP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46790 | PYL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.32585' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46790 | PYL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 0 | 6 | 4 | 100.00% | 40.00% | 4 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.76821' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||
| AT5G46790 | PYL1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 2 | 1 | 0 | 60.00% | 0.00% | 5 | 1 | TAIR8 |
Avg. embryo expression (dissected): '13.1467' Avg. embryo expression (LCM): '59.3267' |
|||
| AT5G46790 | PYL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.17028 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46790 | PYL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46790 | PYL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.0471 x 10-2 | 13 | 0 | 100.00% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000437' Avg. expression score for this sample: '2.79225' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G46780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.96 x 10-4 | 9 | 2 | 0 | 39 | 81.82% | 100.00% | 11 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000437' Avg. expression score for this sample: '23.6845' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT5G46780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.49917 x 10-1 | 6 | 1 | 2 | 1 | 85.71% | 33.33% | 7 | 3 | TAIR8 |
Avg. embryo expression (dissected): '5.05563' Avg. embryo expression (LCM): '2.47404' |
||||
| AT5G46780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.97039 x 10-1 | 37 | 3 | 92.50% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.076 x 10-2 | 64 | 13 | 83.12% | 77 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.340978' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G46770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.666738' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT5G46770 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.386066' Avg. embryo expression (LCM): '0' |
||||||
| AT5G46770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46770 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46760 | MYC3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.50749 x 10-1 | 619 | 286 | 276 | 587 | 68.40% | 68.02% | 905 | 863 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-08' Avg. expression score for this sample: '526.718' Avg. expression score in LCM sample: '347.194' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46760 | MYC3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 x 10-10 | 1025 | 307 | 471 | 1218 | 76.95% | 72.11% | 1332 | 1689 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-08' Avg. expression score for this sample: '679.337' Avg. expression score in LCM sample: '347.194' Tissue used: 'full endosperm' |
||||
| AT5G46760 | MYC3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.74032 x 10-1 | 303 | 265 | 103 | 94 | 53.35% | 47.72% | 568 | 197 | TAIR8 |
Avg. embryo expression (dissected): '381.214' Avg. embryo expression (LCM): '259.222' |
|||
| AT5G46760 | MYC3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.6258 x 10-2 | 248 | 77 | 76.31% | 325 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46760 | MYC3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.0 x 10-24 | 749 | 108 | 87.40% | 857 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46760 | MYC3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1607 | 125 | 92.78% | 1732 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46750 | AGD9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 6 | 3 | 2 | 3 | 66.67% | 60.00% | 9 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.408913' Avg. expression score for this sample: '37.2566' Avg. expression score in LCM sample: '92.9496' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46750 | AGD9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.77278 x 10-1 | 35 | 11 | 7 | 21 | 76.09% | 75.00% | 46 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.408913' Avg. expression score for this sample: '81.7431' Avg. expression score in LCM sample: '92.9496' Tissue used: 'full endosperm' |
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| AT5G46750 | AGD9 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 2 | 0 | 1 | 60.00% | 100.00% | 5 | 1 | TAIR8 |
Avg. embryo expression (dissected): '55.1207' Avg. embryo expression (LCM): '90.9995' |
|||
| AT5G46750 | AGD9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.43117 x 10-1 | 5 | 5 | 50.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46750 | AGD9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.25202 x 10-1 | 18 | 8 | 69.23% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46750 | AGD9 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.78366 x 10-1 | 13 | 1 | 92.86% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46740 | UBP21 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.51056 x 10-1 | 42 | 43 | 28 | 75 | 49.41% | 72.82% | 85 | 103 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.829769' Avg. expression score for this sample: '25.2483' Avg. expression score in LCM sample: '15.9619' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46740 | UBP21 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.89613 x 10-1 | 47 | 28 | 44 | 134 | 62.67% | 75.28% | 75 | 178 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.829769' Avg. expression score for this sample: '20.8448' Avg. expression score in LCM sample: '15.9619' Tissue used: 'full endosperm' |
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| AT5G46740 | UBP21 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.2152 x 10-2 | 104 | 188 | 26 | 51 | 35.62% | 66.23% | 292 | 77 | TAIR8 |
Avg. embryo expression (dissected): '72.1794' Avg. embryo expression (LCM): '78.4032' |
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| AT5G46740 | UBP21 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.923 x 10-3 | 27 | 3 | 90.00% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46740 | UBP21 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.42508 x 10-1 | 2141 | 1169 | 64.68% | 3310 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46740 | UBP21 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.524 x 10-3 | 688 | 233 | 74.70% | 921 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.3 x 10-24 | 202 | 9 | 2 | 99 | 95.73% | 98.02% | 211 | 101 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '315.039' Avg. expression score in LCM sample: '2.77791' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 305 | 5 | 1 | 75 | 98.39% | 98.68% | 310 | 76 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '363.297' Avg. expression score in LCM sample: '2.77791' Tissue used: 'full endosperm' |
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| AT5G46730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.95792 x 10-1 | 64 | 54 | 68 | 39 | 54.24% | 36.45% | 118 | 107 | TAIR8 |
Avg. embryo expression (dissected): '453.22' Avg. embryo expression (LCM): '120.11' |
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| AT5G46730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.1306 x 10-1 | 96 | 1 | 98.97% | 97 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 61 | 1 | 98.39% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.1767 x 10-2 | 535 | 5 | 99.07% | 540 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 4 | 3 | 4 | 63.64% | 57.14% | 11 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.487747' Avg. expression score for this sample: '6.23163' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.04683 x 10-1 | 9 | 4 | 0 | 15 | 69.23% | 100.00% | 13 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.487747' Avg. expression score for this sample: '6.74382' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G46720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 5 | 0 | 1 | 28.57% | 100.00% | 7 | 1 | TAIR8 |
Avg. embryo expression (dissected): '3.78628' Avg. embryo expression (LCM): '17.3183' |
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| AT5G46720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.927 x 10-3 | 0 | 4 | 0.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.88198 x 10-1 | 70 | 28 | 71.43% | 98 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 3 | 76.92% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.23312' Avg. expression score in LCM sample: '6.62876' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 1 | 3 | 7 | 75.00% | 70.00% | 4 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '21.1478' Avg. expression score in LCM sample: '6.62876' Tissue used: 'full endosperm' |
|||||
| AT5G46710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 1 | 1 | 0 | 66.67% | 0.00% | 3 | 1 | TAIR8 |
Avg. embryo expression (dissected): '36.4149' Avg. embryo expression (LCM): '18.1346' |
||||
| AT5G46710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.04251 x 10-1 | 11 | 4 | 73.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.3208 x 10-2 | 10 | 0 | 100.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46700 | TRN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.99581' Avg. expression score in LCM sample: '6.58467' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46700 | TRN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 1 | 4 | 80.00% | 0 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '9.19424' Avg. expression score in LCM sample: '6.58467' Tissue used: 'full endosperm' |
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| AT5G46700 | TRN2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 2 | 2 | 2 | 0.00% | 50.00% | 2 | 4 | TAIR8 |
Avg. embryo expression (dissected): '68.4188' Avg. embryo expression (LCM): '68.6452' |
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| AT5G46700 | TRN2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46700 | TRN2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.00032 x 10-1 | 7 | 5 | 58.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G46700 | TRN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46690 | bHLH071 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '11.3109' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46690 | bHLH071 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '13.7844' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G46690 | bHLH071 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.22393 x 10-1 | 8 | 6 | 0 | 2 | 57.14% | 100.00% | 14 | 2 | TAIR8 |
Avg. embryo expression (dissected): '249.476' Avg. embryo expression (LCM): '45.7383' |
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| AT5G46690 | bHLH071 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46690 | bHLH071 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46690 | bHLH071 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '55.1533' Avg. expression score in LCM sample: '13.5074' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '84.6454' Avg. expression score in LCM sample: '13.5074' Tissue used: 'full endosperm' |
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| AT5G46680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '175.006' Avg. embryo expression (LCM): '80.7516' |
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| AT5G46680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.256927' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G46670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.290902' Avg. embryo expression (LCM): '0' |
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| AT5G46670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.364511' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G46660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.316598' Avg. embryo expression (LCM): '0' |
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| AT5G46660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.132391' Avg. expression score for this sample: '2.3935' Avg. expression score in LCM sample: '1.69026' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G46650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.32391 x 10-1 | 17 | 2 | 0 | 3 | 89.47% | 100.00% | 19 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.132391' Avg. expression score for this sample: '10.9236' Avg. expression score in LCM sample: '1.69026' Tissue used: 'full endosperm' |
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| AT5G46650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.24719' Avg. embryo expression (LCM): '0' |
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| AT5G46650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G46650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.9989 x 10-2 | 2 | 3 | 40.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G46650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |