Displaying data sets 140801 - 140900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G55630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.24544 x 10-1 4 5 5 5 44.44% 50.00% 9 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.381374'
Avg. expression score for this sample: '32.564'
Avg. expression score in LCM sample: '31.8945'
Tissue used: 'pure endosperm, no chalazal'
AT1G55630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2274 x 10-1 71 21 77.17% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55625 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55625 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55625 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55625 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55625 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G55625 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55620 CLC-F endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5031 x 10-2 32 4 88.89% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55620 CLC-F embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 1 1 50.00% 50.00% 4 2 TAIR8 Avg. embryo expression (dissected): '41.1988'
Avg. embryo expression (LCM): '20.9728'
AT1G55620 CLC-F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 2 3 80.00% 60.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.831981'
Avg. expression score for this sample: '36.7001'
Avg. expression score in LCM sample: '32.0121'
Tissue used: 'pure endosperm, no chalazal'
AT1G55620 CLC-F endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1075 x 10-2 31 3 91.18% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55620 CLC-F endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.64649 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55620 CLC-F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.13738 x 10-1 10 9 3 20 52.63% 86.96% 19 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.831981'
Avg. expression score for this sample: '40.8322'
Avg. expression score in LCM sample: '32.0121'
Tissue used: 'full endosperm'
AT1G55615 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55615 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55615 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55615 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G55615 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55615 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55610 BRL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.64834 x 10-1 25 1 96.15% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55610 BRL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.249 x 10-2 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55610 BRL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.34614 x 10-1 12 1 1 4 92.31% 80.00% 13 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231989'
Avg. expression score for this sample: '4.4302'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55610 BRL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.40862 x 10-1 15 6 71.43% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55610 BRL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.27741'
Avg. embryo expression (LCM): '.954452'
AT1G55610 BRL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231989'
Avg. expression score for this sample: '.655871'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55600 WRKY10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55600 WRKY10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G55600 WRKY10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 59 59 50.00% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55600 WRKY10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 201 69 74.44% 270 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55600 WRKY10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55600 WRKY10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55591 MIR158B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55591 MIR158B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55591 MIR158B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55591 MIR158B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G55591 MIR158B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55591 MIR158B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '91.7487'
Avg. expression score in LCM sample: '56.9397'
Tissue used: 'pure endosperm, no chalazal'
AT1G55590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '95.501'
Avg. expression score in LCM sample: '56.9397'
Tissue used: 'full endosperm'
AT1G55590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '103.169'
Avg. embryo expression (LCM): '82.8866'
AT1G55590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55580 LAS endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55580 LAS embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.85572'
Avg. embryo expression (LCM): '.715839'
AT1G55580 LAS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.03096'
Avg. expression score in LCM sample: '.837781'
Tissue used: 'pure endosperm, no chalazal'
AT1G55580 LAS endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55580 LAS endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55580 LAS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.719528'
Avg. expression score in LCM sample: '.837781'
Tissue used: 'full endosperm'
AT1G55570 sks12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346935'
Avg. expression score for this sample: '1.92967'
Avg. expression score in LCM sample: '.7055'
Tissue used: 'full endosperm'
AT1G55570 sks12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55570 sks12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.21037'
Avg. embryo expression (LCM): '0'
AT1G55570 sks12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55570 sks12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55570 sks12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.14685 x 10-1 1 0 6 1 100.00% 14.29% 1 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346935'
Avg. expression score for this sample: '6.97911'
Avg. expression score in LCM sample: '.7055'
Tissue used: 'pure endosperm, no chalazal'
AT1G55560 sks14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.21587 x 10-1 4 2 14 14 66.67% 50.00% 6 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.326508'
Avg. expression score for this sample: '84.2174'
Avg. expression score in LCM sample: '13.7132'
Tissue used: 'pure endosperm, no chalazal'
AT1G55560 sks14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.335 x 10-3 1 10 9.09% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55560 sks14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.6765 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55560 sks14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 7 1 8 41.67% 88.89% 12 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.326508'
Avg. expression score for this sample: '18.0426'
Avg. expression score in LCM sample: '13.7132'
Tissue used: 'full endosperm'
AT1G55560 sks14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.47394 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55560 sks14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 2 66.67% 0 3 TAIR8 Avg. embryo expression (dissected): '29.8546'
Avg. embryo expression (LCM): '4.55876'
AT1G55550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 23 0 9 41.03% 100.00% 39 9 TAIR8 Avg. embryo expression (dissected): '47.9173'
Avg. embryo expression (LCM): '24.3385'
AT1G55550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.85327 x 10-1 718 244 74.64% 962 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.7329 148 77 65.78% 225 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.8084 x 10-1 13 4 2 7 76.47% 77.78% 17 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.7836'
Avg. expression score in LCM sample: '56.9838'
Tissue used: 'pure endosperm, no chalazal'
AT1G55550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.37428 x 10-1 2 3 5 9 40.00% 64.29% 5 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.3555'
Avg. expression score in LCM sample: '56.9838'
Tissue used: 'full endosperm'
AT1G55550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.26087 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55546 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55546 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G55546 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55546 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G55546 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G55546 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55545 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.89742 x 10-1 34 6 85.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55545 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.9681 x 10-2 11 0 1 7 100.00% 87.50% 11 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.095279'
Avg. expression score for this sample: '29.4198'
Avg. expression score in LCM sample: '32.5412'
Tissue used: 'pure endosperm, no chalazal'
AT1G55545 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.69197 x 10-1 16 4 6 16 80.00% 72.73% 20 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.095279'
Avg. expression score for this sample: '38.0212'
Avg. expression score in LCM sample: '32.5412'
Tissue used: 'full endosperm'
AT1G55545 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.11256 x 10-1 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55545 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 3 1 0 66.67% 0.00% 9 1 TAIR8 Avg. embryo expression (dissected): '46.4065'
Avg. embryo expression (LCM): '53.1856'
AT1G55545 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2758 x 10-2 28 16 63.64% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55540 LNO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.52 x 10-4 144 20 87.80% 164 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55540 LNO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.0243 x 10-1 44 52 13 24 45.83% 64.86% 96 37 TAIR8 Avg. embryo expression (dissected): '113.759'
Avg. embryo expression (LCM): '62.7929'
AT1G55540 LNO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7016 x 10-1 33 19 6 45 63.46% 88.24% 52 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.124278'
Avg. expression score for this sample: '62.9703'
Avg. expression score in LCM sample: '23.6636'
Tissue used: 'pure endosperm, no chalazal'
AT1G55540 LNO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0644 x 10-2 112 20 84.85% 132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55540 LNO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.1194 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55540 LNO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.89918 x 10-1 36 22 22 75 62.07% 77.32% 58 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.124278'
Avg. expression score for this sample: '44.5258'
Avg. expression score in LCM sample: '23.6636'
Tissue used: 'full endosperm'
AT1G55535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.34869 x 10-1 20 3 6 17 86.96% 73.91% 23 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.111029'
Avg. expression score for this sample: '33.5046'
Avg. expression score in LCM sample: '86.703'
Tissue used: 'full endosperm'
AT1G55535 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55535 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 5 2 0 61.54% 0.00% 13 2 TAIR8 Avg. embryo expression (dissected): '38.0677'
Avg. embryo expression (LCM): '38.379'
AT1G55535 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.52564 x 10-1 45 17 72.58% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55535 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.66407 x 10-1 61 29 67.78% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.7802 16 4 4 7 80.00% 63.64% 20 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.111029'
Avg. expression score for this sample: '44.7519'
Avg. expression score in LCM sample: '86.703'
Tissue used: 'pure endosperm, no chalazal'
AT1G55530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 204 41 111 96 83.27% 46.38% 245 207 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208386'
Avg. expression score for this sample: '310.521'
Avg. expression score in LCM sample: '58.8652'
Tissue used: 'pure endosperm, no chalazal'
AT1G55530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-9 183 21 89.71% 204 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.62434 x 10-1 40 20 66.67% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6698 x 10-2 147 28 53 91 84.00% 63.19% 175 144 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208386'
Avg. expression score for this sample: '248.54'
Avg. expression score in LCM sample: '58.8652'
Tissue used: 'full endosperm'
AT1G55530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.48616 x 10-1 112 63 64.00% 175 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G55530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.28821 x 10-1 86 50 22 10 63.24% 31.25% 136 32 TAIR8 Avg. embryo expression (dissected): '234.91'
Avg. embryo expression (LCM): '52.5828'
AT1G55525 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G55525 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'