| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM5G845532 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.72 x 10-12 | 79 | 196 | 47 | 197 | 28.73% | 80.74% | 275 | 244 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.72e-12' χ2 p-value for Mo17 x B73: '7.78e-22' Biased in favor of strain: 'Mo17' |
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| GRMZM5G845532 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.178499 x 10-1 | 22 | 9 | 16 | 31 | 70.97% | 65.96% | 31 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6114703' χ2 p-value for Mo17 x B73: '.9178499' Biased in favor of strain: '' |
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| GRMZM5G845472 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 3 | 6 | 0.00% | 66.67% | 1 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM5G845472 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 3 | 60.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM5G845366 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.976354 x 10-1 | 58 | 37 | 55 | 51 | 61.05% | 48.11% | 95 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0311967' χ2 p-value for Mo17 x B73: '.6976354' Biased in favor of strain: '' |
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| GRMZM5G845366 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.936419 x 10-1 | 73 | 29 | 43 | 58 | 71.57% | 57.43% | 102 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2936419' χ2 p-value for Mo17 x B73: '.0488299' Biased in favor of strain: '' |
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| GRMZM5G845175 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | PEG | 0.0 | 20 | 322 | 386 | 4 | 5.85% | 1.03% | 342 | 390 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM5G845175 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.762198 x 10-1 | 173 | 160 | 168 | 99 | 51.95% | 37.08% | 333 | 267 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4762198' χ2 p-value for Mo17 x B73: '.0000241' Biased in favor of strain: '' |
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| GRMZM5G845021 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0914 x 10-3 | 69 | 21 | 52 | 25 | 76.67% | 32.47% | 90 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.20e-07' χ2 p-value for Mo17 x B73: '.0020914' Biased in favor of strain: 'B73' |
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| GRMZM5G845021 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 21 | 2 | 6 | 1 | 91.30% | 14.29% | 23 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0121933' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: '' |
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| GRMZM5G844703 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.790995 x 10-1 | 61 | 14 | 10 | 16 | 81.33% | 61.54% | 75 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0070514' χ2 p-value for Mo17 x B73: '.5790995' Biased in favor of strain: '' |
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| GRMZM5G844703 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.09 x 10-26 | 650 | 319 | 983 | 395 | 67.08% | 28.66% | 969 | 1378 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.09e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G844316 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 2 | 100.00% | 50.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G844316 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 12 | 4 | 25.00% | 0 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G844315 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.36 x 10-19 | 0 | 83 | 0 | 164 | 0.00% | 100.00% | 83 | 164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.53e-38' χ2 p-value for Mo17 x B73: '1.36e-19' Biased in favor of strain: 'Mo17' |
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| GRMZM5G844315 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.04 x 10-10 | 0 | 48 | 1 | 42 | 0.00% | 97.67% | 48 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.26e-12' χ2 p-value for Mo17 x B73: '4.04e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM5G844195 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.387 x 10-4 | 64 | 26 | 54 | 21 | 71.11% | 28.00% | 90 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000619' χ2 p-value for Mo17 x B73: '.0001387' Biased in favor of strain: 'B73' |
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| GRMZM5G844195 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.272724 x 10-1 | 64 | 22 | 44 | 58 | 74.42% | 56.86% | 86 | 102 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1272724' χ2 p-value for Mo17 x B73: '.0356918' Biased in favor of strain: '' |
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| GRMZM5G844173 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 0 | 22 | 0.00% | 100.00% | 7 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: '' |
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| GRMZM5G844173 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 0 | 22 | 0 | 11 | 0.00% | 100.00% | 22 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'Mo17' |
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| GRMZM5G844123 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.456028 x 10-1 | 20 | 18 | 34 | 22 | 52.63% | 39.29% | 38 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7456028' χ2 p-value for Mo17 x B73: '.1088094' Biased in favor of strain: '' |
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| GRMZM5G844123 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.230743 x 10-1 | 7 | 3 | 1 | 11 | 70.00% | 91.67% | 10 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8230743' χ2 p-value for Mo17 x B73: '.0661926' Biased in favor of strain: '' |
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| GRMZM5G844096 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.868519 x 10-1 | 82 | 60 | 56 | 138 | 57.75% | 71.13% | 142 | 194 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0241365' χ2 p-value for Mo17 x B73: '.1868519' Biased in favor of strain: '' |
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| GRMZM5G844096 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.373948 x 10-1 | 66 | 50 | 38 | 62 | 56.90% | 62.00% | 116 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1373948' χ2 p-value for Mo17 x B73: '.0163951' Biased in favor of strain: '' |
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| GRMZM5G844080 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.205804 x 10-1 | 236 | 153 | 213 | 234 | 60.67% | 52.35% | 389 | 447 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000257' χ2 p-value for Mo17 x B73: '.3205804' Biased in favor of strain: '' |
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| GRMZM5G844080 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.33637 x 10-1 | 192 | 97 | 81 | 211 | 66.44% | 72.26% | 289 | 292 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.933637' χ2 p-value for Mo17 x B73: '.0425977' Biased in favor of strain: '' |
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| GRMZM5G843991 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.265086 x 10-1 | 244 | 106 | 98 | 165 | 69.71% | 62.74% | 350 | 263 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2265086' χ2 p-value for Mo17 x B73: '.1764825' Biased in favor of strain: '' |
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| GRMZM5G843991 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.53175 x 10-2 | 151 | 118 | 129 | 100 | 56.13% | 43.67% | 269 | 229 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0442151' χ2 p-value for Mo17 x B73: '.0553175' Biased in favor of strain: '' |
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| GRMZM5G843914 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.130254 x 10-1 | 135 | 150 | 145 | 141 | 47.37% | 49.30% | 285 | 286 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3742593' χ2 p-value for Mo17 x B73: '.8130254' Biased in favor of strain: '' |
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| GRMZM5G843914 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.794839 x 10-1 | 15 | 10 | 27 | 21 | 60.00% | 43.75% | 25 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794839' χ2 p-value for Mo17 x B73: '.000757' Biased in favor of strain: '' |
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| GRMZM5G843892 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM5G843892 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G843748 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 69 | 69 | 69 | 53 | 50.00% | 43.44% | 138 | 122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1474572' Biased in favor of strain: '' |
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| GRMZM5G843748 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.563 x 10-4 | 232 | 71 | 73 | 78 | 76.57% | 51.66% | 303 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002563' χ2 p-value for Mo17 x B73: '.0000912' Biased in favor of strain: 'B73' |
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| GRMZM5G843555 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.039907 x 10-1 | 1382 | 744 | 1090 | 2536 | 65.00% | 69.94% | 2126 | 3626 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1039907' χ2 p-value for Mo17 x B73: '.0000291' Biased in favor of strain: '' |
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| GRMZM5G843555 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.73 x 10-14 | 850 | 131 | 380 | 198 | 86.65% | 34.26% | 981 | 578 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.73e-14' Biased in favor of strain: 'B73' |
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| GRMZM5G843474 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.89268 x 10-1 | 49 | 34 | 29 | 27 | 59.04% | 48.21% | 83 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0996683' χ2 p-value for Mo17 x B73: '.789268' Biased in favor of strain: '' |
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| GRMZM5G843474 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.127091 x 10-1 | 30 | 12 | 17 | 24 | 71.43% | 58.54% | 42 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5127091' χ2 p-value for Mo17 x B73: '.2694562' Biased in favor of strain: '' |
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| GRMZM5G843368 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.587955 x 10-1 | 28 | 7 | 10 | 28 | 80.00% | 73.68% | 35 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0942687' χ2 p-value for Mo17 x B73: '.3587955' Biased in favor of strain: '' |
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| GRMZM5G843368 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.316146 x 10-1 | 13 | 10 | 22 | 16 | 56.52% | 42.11% | 23 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5316146' χ2 p-value for Mo17 x B73: '.33039' Biased in favor of strain: '' |
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| GRMZM5G843302 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 791 | 212 | 1504 | 404 | 78.86% | 21.17% | 1003 | 1908 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G843302 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 777 | 85 | 367 | 184 | 90.14% | 33.39% | 862 | 551 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G843216 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G843216 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.41 x 10-10 | 115 | 30 | 99 | 27 | 79.31% | 21.43% | 145 | 126 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.68e-12' χ2 p-value for Mo17 x B73: '1.41e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G843213 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.658029 x 10-1 | 42 | 24 | 21 | 26 | 63.64% | 55.32% | 66 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0267157' χ2 p-value for Mo17 x B73: '.4658029' Biased in favor of strain: '' |
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| GRMZM5G843213 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.400288 x 10-1 | 77 | 35 | 66 | 86 | 68.75% | 56.58% | 112 | 152 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6400288' χ2 p-value for Mo17 x B73: '.0083327' Biased in favor of strain: '' |
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| GRMZM5G843192 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 1 | 0 | 100.00% | 0.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G843192 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G843174 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.002189 x 10-1 | 68 | 91 | 45 | 58 | 42.77% | 56.31% | 159 | 103 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0681493' χ2 p-value for Mo17 x B73: '.2002189' Biased in favor of strain: '' |
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| GRMZM5G843174 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.654 x 10-3 | 13 | 44 | 10 | 54 | 22.81% | 84.38% | 57 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.15e-12' χ2 p-value for Mo17 x B73: '.002654' Biased in favor of strain: 'Mo17' |
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| GRMZM5G843157 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 4 | 0.00% | 100.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G843157 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G843141 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 0 | 9 | 40.00% | 100.00% | 5 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM5G843141 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 5 | 5 | 100.00% | 50.00% | 7 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.2635524' Biased in favor of strain: '' |
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| GRMZM5G842990 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 9 | 2 | 75.00% | 18.18% | 4 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: '' |
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| GRMZM5G842990 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.55003 x 10-2 | 12 | 4 | 9 | 2 | 75.00% | 18.18% | 16 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: 'B73' |
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| GRMZM5G842970 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.974661 x 10-1 | 80 | 62 | 52 | 66 | 56.34% | 55.93% | 142 | 118 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1309091' χ2 p-value for Mo17 x B73: '.1974661' Biased in favor of strain: '' |
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| GRMZM5G842970 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.6781 x 10-3 | 42 | 7 | 25 | 21 | 85.71% | 45.65% | 49 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046781' χ2 p-value for Mo17 x B73: '.002499' Biased in favor of strain: 'B73' |
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| GRMZM5G842961 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G842961 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 3 | 100.00% | 100.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM5G842886 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.473896 x 10-1 | 14 | 13 | 12 | 17 | 51.85% | 58.62% | 27 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8473896' χ2 p-value for Mo17 x B73: '.3531604' Biased in favor of strain: '' |
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| GRMZM5G842886 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.679247 x 10-1 | 19 | 14 | 14 | 13 | 57.58% | 48.15% | 33 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2679247' χ2 p-value for Mo17 x B73: '.0412268' Biased in favor of strain: '' |
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| GRMZM5G842695 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 4 | 100.00% | 100.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G842695 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.16 x 10-25 | 175 | 27 | 230 | 50 | 86.63% | 17.86% | 202 | 280 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.16e-25' χ2 p-value for Mo17 x B73: '5.49e-27' Biased in favor of strain: 'B73' |
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| GRMZM5G842645 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33 x 10-9 | 76 | 9 | 59 | 9 | 89.41% | 13.24% | 85 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.67e-13' χ2 p-value for Mo17 x B73: '1.33e-09' Biased in favor of strain: 'B73' |
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| GRMZM5G842645 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 11 | 100.00% | 91.67% | 1 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0661926' Biased in favor of strain: '' |
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| GRMZM5G842517 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.164455 x 10-1 | 236 | 241 | 175 | 377 | 49.48% | 68.30% | 477 | 552 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.66e-15' χ2 p-value for Mo17 x B73: '.4164455' Biased in favor of strain: '' |
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| GRMZM5G842517 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.815189 x 10-1 | 256 | 156 | 194 | 186 | 62.14% | 48.95% | 412 | 380 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.37e-07' χ2 p-value for Mo17 x B73: '.6815189' Biased in favor of strain: '' |
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| GRMZM5G842508 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.19 x 10-17 | 83 | 5 | 83 | 2 | 94.32% | 2.35% | 88 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.19e-17' χ2 p-value for Mo17 x B73: '1.55e-18' Biased in favor of strain: 'B73' |
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| GRMZM5G842508 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.96 x 10-13 | 127 | 4 | 39 | 4 | 96.95% | 9.30% | 131 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.96e-13' χ2 p-value for Mo17 x B73: '1.47e-15' Biased in favor of strain: 'B73' |
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| GRMZM5G842494 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G842494 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 2 | 100.00% | 50.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G842484 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 2 | 7 | 1 | 80.00% | 12.50% | 10 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: '' |
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| GRMZM5G842484 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G842165 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 6 | 0 | 0.00% | 0 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G842165 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G842148 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.89 x 10-11 | 63 | 2 | 48 | 1 | 96.92% | 2.04% | 65 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.85e-14' χ2 p-value for Mo17 x B73: '1.89e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G842148 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 8 | 0 | 100.00% | 0.00% | 1 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM5G842071 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 0 | 2 | 66.67% | 100.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G842071 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G842022 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.348273 x 10-1 | 14 | 11 | 11 | 12 | 56.00% | 52.17% | 25 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5485063' χ2 p-value for Mo17 x B73: '.8348273' Biased in favor of strain: '' |
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| GRMZM5G842022 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 0 | 2 | 80.00% | 100.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G842019 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G842019 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 2 | 3 | 60.00% | 60.00% | 5 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM5G841900 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.924481 x 10-1 | 37 | 30 | 46 | 38 | 55.22% | 45.24% | 67 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3924481' χ2 p-value for Mo17 x B73: '.3827331' Biased in favor of strain: '' |
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| GRMZM5G841900 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.985351 x 10-1 | 7 | 11 | 11 | 19 | 38.89% | 63.33% | 18 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0124183' χ2 p-value for Mo17 x B73: '.6985351' Biased in favor of strain: '' |
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| GRMZM5G841893 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G841893 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.4469 x 10-2 | 17 | 49 | 35 | 51 | 25.76% | 59.30% | 66 | 86 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000818' χ2 p-value for Mo17 x B73: '.084469' Biased in favor of strain: '' |
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| GRMZM5G841743 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 3 | 0 | 100.00% | 0.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM5G841743 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 4 | 0 | 100.00% | 0.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM5G841684 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 0 | 18 | 40.00% | 100.00% | 5 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2058979' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM5G841684 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.927167 x 10-1 | 22 | 16 | 15 | 19 | 57.89% | 55.88% | 38 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.33039' χ2 p-value for Mo17 x B73: '.4927167' Biased in favor of strain: '' |
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| GRMZM5G841619 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.57 x 10-8 | 2234 | 1554 | 1857 | 1536 | 58.98% | 45.27% | 3788 | 3393 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.23e-28' χ2 p-value for Mo17 x B73: '3.57e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G841619 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.82 x 10-19 | 5262 | 2095 | 2998 | 3921 | 71.52% | 56.67% | 7357 | 6919 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.82e-19' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G841309 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G841309 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G841142 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.101619 x 10-1 | 173 | 139 | 160 | 172 | 55.45% | 51.81% | 312 | 332 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0542455' χ2 p-value for Mo17 x B73: '.5101619' Biased in favor of strain: '' |
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| GRMZM5G841142 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 7.3367 x 10-3 | 22 | 32 | 72 | 95 | 40.74% | 56.89% | 54 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000531' χ2 p-value for Mo17 x B73: '.0073367' Biased in favor of strain: '' |
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| GRMZM5G841101 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.77 x 10-17 | 143 | 0 | 73 | 5 | 100.00% | 6.41% | 143 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.77e-17' χ2 p-value for Mo17 x B73: '1.49e-29' Biased in favor of strain: 'B73' |
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| GRMZM5G841101 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.58 x 10-9 | 85 | 5 | 51 | 7 | 94.44% | 12.07% | 90 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.38e-17' χ2 p-value for Mo17 x B73: '7.58e-09' Biased in favor of strain: 'B73' |