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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G65750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2437 285 89.53% 2722 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 5100 138 97.37% 5238 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '19.6428'
Avg. expression score in LCM sample: '7.52533'
Tissue used: 'pure endosperm, no chalazal'
AT5G65740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.9758'
Avg. expression score in LCM sample: '7.52533'
Tissue used: 'full endosperm'
AT5G65740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '26.0485'
Avg. embryo expression (LCM): '21.4249'
AT5G65740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65730 XTH6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65730 XTH6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.300862'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65730 XTH6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.261315'
Avg. embryo expression (LCM): '0'
AT5G65730 XTH6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65730 XTH6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65730 XTH6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65720 NFS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4496.26'
Avg. expression score in LCM sample: '1182.95'
Tissue used: 'pure endosperm, no chalazal'
AT5G65720 NFS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4715.06'
Avg. expression score in LCM sample: '1182.95'
Tissue used: 'full endosperm'
AT5G65720 NFS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7311.42'
Avg. embryo expression (LCM): '3371.27'
AT5G65720 NFS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65720 NFS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65720 NFS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65710 HSL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 18 14 25 56 56.25% 69.14% 32 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001911'
Avg. expression score for this sample: '585.611'
Avg. expression score in LCM sample: '757.09'
Tissue used: 'pure endosperm, no chalazal'
AT5G65710 HSL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.8 x 10-5 82 12 24 106 87.23% 81.54% 94 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001911'
Avg. expression score for this sample: '637.805'
Avg. expression score in LCM sample: '757.09'
Tissue used: 'full endosperm'
AT5G65710 HSL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 3 1 3 0.00% 75.00% 3 4 TAIR8 Avg. embryo expression (dissected): '59.5193'
Avg. embryo expression (LCM): '63.6343'
AT5G65710 HSL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.71483 x 10-1 23 4 85.19% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65710 HSL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.9 x 10-5 63 2 96.92% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65710 HSL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-8 77 0 100.00% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65700 BAM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.81853 x 10-1 27 19 18 57 58.70% 76.00% 46 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.075368'
Avg. expression score for this sample: '363.393'
Avg. expression score in LCM sample: '459.942'
Tissue used: 'pure endosperm, no chalazal'
AT5G65700 BAM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.7645 x 10-2 113 47 107 277 70.62% 72.14% 160 384 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.075368'
Avg. expression score for this sample: '272.514'
Avg. expression score in LCM sample: '459.942'
Tissue used: 'full endosperm'
AT5G65700 BAM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.11392 x 10-1 18 7 4 2 72.00% 33.33% 25 6 TAIR8 Avg. embryo expression (dissected): '177.864'
Avg. embryo expression (LCM): '186.834'
AT5G65700 BAM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 19 8 70.37% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65700 BAM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.37124 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65700 BAM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.4883 x 10-2 9 9 50.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65690 PCK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 4 0 2 42.86% 100.00% 7 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38084'
Avg. expression score for this sample: '1.90732'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65690 PCK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.24503 x 10-1 2 0 2 13 100.00% 86.67% 2 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38084'
Avg. expression score for this sample: '2.0189'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65690 PCK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '2.2546'
Avg. embryo expression (LCM): '0'
AT5G65690 PCK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65690 PCK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.87039 x 10-1 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65690 PCK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0 x 10-5 109 189 36.58% 298 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65687 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '10.1247'
Avg. expression score in LCM sample: '13.3604'
Tissue used: 'pure endosperm, no chalazal'
AT5G65687 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 1 4 100.00% 80.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '22.2196'
Avg. expression score in LCM sample: '13.3604'
Tissue used: 'full endosperm'
AT5G65687 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.2118'
Avg. embryo expression (LCM): '20.6965'
AT5G65687 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65687 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.23077 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65687 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65685 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '13.0537'
Avg. expression score in LCM sample: '32.3501'
Tissue used: 'pure endosperm, no chalazal'
AT5G65685 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 6 1 0 5 85.71% 100.00% 7 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '11.5974'
Avg. expression score in LCM sample: '32.3501'
Tissue used: 'full endosperm'
AT5G65685 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '12.7588'
Avg. embryo expression (LCM): '11.3781'
AT5G65685 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.53846 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65685 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65685 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65683 WAVH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.84368 x 10-1 26 2 10 17 92.86% 62.96% 28 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.0972'
Avg. expression score in LCM sample: '3.08656'
Tissue used: 'pure endosperm, no chalazal'
AT5G65683 WAVH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.07449 x 10-1 17 10 13 10 62.96% 43.48% 27 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.8223'
Avg. expression score in LCM sample: '3.08656'
Tissue used: 'full endosperm'
AT5G65683 WAVH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 14 5 4 51.72% 44.44% 29 9 TAIR8 Avg. embryo expression (dissected): '28.0682'
Avg. embryo expression (LCM): '21.0859'
AT5G65683 WAVH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.73944 x 10-1 4 5 44.44% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65683 WAVH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.75756 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65683 WAVH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-6 39 0 100.00% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65670 IAA9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.5 x 10-4 216 35 43 82 86.06% 65.60% 251 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '209.572'
Avg. expression score in LCM sample: '72.6665'
Tissue used: 'pure endosperm, no chalazal'
AT5G65670 IAA9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 571 80 127 751 87.71% 85.54% 651 878 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '551.328'
Avg. expression score in LCM sample: '72.6665'
Tissue used: 'full endosperm'
AT5G65670 IAA9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.2642 x 10-2 173 128 21 22 57.48% 51.16% 301 43 TAIR8 Avg. embryo expression (dissected): '359.025'
Avg. embryo expression (LCM): '311.252'
AT5G65670 IAA9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.151 x 10-3 120 8 93.75% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65670 IAA9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5 x 10-27 882 24 97.35% 906 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65670 IAA9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1970 27 98.65% 1997 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '144.208'
Avg. expression score in LCM sample: '25.8977'
Tissue used: 'pure endosperm, no chalazal'
AT5G65660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '110.47'
Avg. expression score in LCM sample: '25.8977'
Tissue used: 'full endosperm'
AT5G65660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '145.405'
Avg. embryo expression (LCM): '54.454'
AT5G65660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '369.975'
Avg. expression score in LCM sample: '104.002'
Tissue used: 'pure endosperm, no chalazal'
AT5G65650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 8 3 9 57.89% 75.00% 19 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '365.974'
Avg. expression score in LCM sample: '104.002'
Tissue used: 'full endosperm'
AT5G65650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 3 0 1 1 100.00% 50.00% 3 2 TAIR8 Avg. embryo expression (dissected): '487.664'
Avg. embryo expression (LCM): '252.214'
AT5G65650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.77124 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.42588 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.29 x 10-3 25 0 100.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65640 bHLH093 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36985'
Avg. expression score for this sample: '1.56735'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65640 bHLH093 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.37186 x 10-1 2 1 4 2 66.67% 33.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36985'
Avg. expression score for this sample: '6.94065'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65640 bHLH093 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 2 7 0 1 22.22% 100.00% 9 1 TAIR8 Avg. embryo expression (dissected): '28.6496'
Avg. embryo expression (LCM): '55.4336'
AT5G65640 bHLH093 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65640 bHLH093 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65640 bHLH093 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65630 GTE7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.6787 961 254 474 538 79.09% 53.16% 1215 1012 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-17'
Avg. expression score for this sample: '1777.43'
Avg. expression score in LCM sample: '548.541'
Tissue used: 'pure endosperm, no chalazal'
AT5G65630 GTE7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.7 x 10-21 4035 712 1692 2491 85.00% 59.55% 4747 4183 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-17'
Avg. expression score for this sample: '4512.47'
Avg. expression score in LCM sample: '548.541'
Tissue used: 'full endosperm'
AT5G65630 GTE7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.4 x 10-7 711 426 147 134 62.53% 47.69% 1137 281 TAIR8 Avg. embryo expression (dissected): '1646.08'
Avg. embryo expression (LCM): '1421'
AT5G65630 GTE7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.7 x 10-8 553 321 63.27% 874 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65630 GTE7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.1454 x 10-2 1260 443 73.99% 1703 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65630 GTE7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2667 383 87.44% 3050 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 2 4 83.33% 66.67% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '163.552'
Avg. expression score in LCM sample: '114.188'
Tissue used: 'pure endosperm, no chalazal'
AT5G65620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.54622 x 10-1 5 4 5 8 55.56% 61.54% 9 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '199.199'
Avg. expression score in LCM sample: '114.188'
Tissue used: 'full endosperm'
AT5G65620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 1 4 1 1 20.00% 50.00% 5 2 TAIR8 Avg. embryo expression (dissected): '190.977'
Avg. embryo expression (LCM): '135.294'
AT5G65620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.71429 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 6 68.42% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8347 x 10-2 22 3 88.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65615 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65615 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65615 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G65615 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65615 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65615 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.10382 x 10-1 5 3 4 3 62.50% 42.86% 8 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.336591'
Avg. expression score for this sample: '16.9339'
Avg. expression score in LCM sample: '29.4693'
Tissue used: 'pure endosperm, no chalazal'
AT5G65610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.30265 x 10-1 8 4 6 3 66.67% 33.33% 12 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.336591'
Avg. expression score for this sample: '11.8563'
Avg. expression score in LCM sample: '29.4693'
Tissue used: 'full endosperm'