Displaying data sets 138801 - 138900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G59670 GSTU15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.37744 x 10-1 4 4 4 1 50.00% 20.00% 8 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.139244'
Avg. expression score for this sample: '100.883'
Avg. expression score in LCM sample: '773.213'
Tissue used: 'pure endosperm, no chalazal'
AT1G59670 GSTU15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6985 x 10-1 0 0 6 4 40.00% 0 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.139244'
Avg. expression score for this sample: '35.8715'
Avg. expression score in LCM sample: '773.213'
Tissue used: 'full endosperm'
AT1G59670 GSTU15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.27954 x 10-1 109 147 42.58% 256 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59670 GSTU15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.66795'
Avg. embryo expression (LCM): '0'
AT1G59660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.40538 x 10-1 66 46 29 24 58.93% 45.28% 112 53 TAIR8 Avg. embryo expression (dissected): '84.5846'
Avg. embryo expression (LCM): '68.8712'
AT1G59660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.12913 x 10-1 53 29 64.63% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0 x 10-13 523 103 83.55% 626 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.1014 255 154 62.35% 409 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.44461 x 10-1 98 57 99 208 63.23% 67.75% 155 307 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.879162'
Avg. expression score for this sample: '141.811'
Avg. expression score in LCM sample: '113.483'
Tissue used: 'pure endosperm, no chalazal'
AT1G59660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.11928 x 10-1 146 50 83 138 74.49% 62.44% 196 221 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.879162'
Avg. expression score for this sample: '136.316'
Avg. expression score in LCM sample: '113.483'
Tissue used: 'full endosperm'
AT1G59650 CW14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '39.0069'
Avg. expression score in LCM sample: '6.3642'
Tissue used: 'full endosperm'
AT1G59650 CW14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1049 x 10-1 3 7 30.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59650 CW14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.8053'
Avg. expression score in LCM sample: '6.3642'
Tissue used: 'pure endosperm, no chalazal'
AT1G59650 CW14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '33.6872'
Avg. embryo expression (LCM): '38.693'
AT1G59650 CW14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59650 CW14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59640 BPEp endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.27432 x 10-1 19 5 79.17% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59640 BPEp endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-5 67 3 95.71% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59640 BPEp endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.55183 x 10-1 13 17 14 22 43.33% 61.11% 30 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.209182'
Avg. expression score for this sample: '15.1143'
Avg. expression score in LCM sample: '4.70333'
Tissue used: 'pure endosperm, no chalazal'
AT1G59640 BPEp endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.12 x 10-3 43 6 12 55 87.76% 82.09% 49 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.209182'
Avg. expression score for this sample: '15.4385'
Avg. expression score in LCM sample: '4.70333'
Tissue used: 'full endosperm'
AT1G59640 BPEp endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.09084 x 10-1 30 7 81.08% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59640 BPEp embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.77086 x 10-1 9 7 3 7 56.25% 70.00% 16 10 TAIR8 Avg. embryo expression (dissected): '8.25485'
Avg. embryo expression (LCM): '19.1016'
AT1G59630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.404348'
Avg. embryo expression (LCM): '0'
AT1G59630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.30435 x 10-1 0 15 0.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.8745 x 10-2 27 19 58.70% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.18881 x 10-1 1 0 7 0 100.00% 0.00% 1 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '5.77094'
Avg. expression score in LCM sample: '6.14373'
Tissue used: 'pure endosperm, no chalazal'
AT1G59630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '.988738'
Avg. expression score in LCM sample: '6.14373'
Tissue used: 'full endosperm'
AT1G59620 CW9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5306 x 10-1 16 3 6 15 84.21% 71.43% 19 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.820169'
Avg. expression score for this sample: '10.2156'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'full endosperm'
AT1G59620 CW9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 6 68.42% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59620 CW9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.2381 x 10-1 1 2 2 0 33.33% 0.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.820169'
Avg. expression score for this sample: '2.97903'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'pure endosperm, no chalazal'
AT1G59620 CW9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 1 5 2 80.00% 28.57% 5 7 TAIR8 Avg. embryo expression (dissected): '5.94266'
Avg. embryo expression (LCM): '1.87123'
AT1G59620 CW9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.7132 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59620 CW9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.71452 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59610 DL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.16 x 10-4 575 103 84.81% 678 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59610 DL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.1229 x 10-2 63 9 87.50% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59610 DL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.5067 x 10-1 65 30 34 74 68.42% 68.52% 95 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.5e-06'
Avg. expression score for this sample: '56.0821'
Avg. expression score in LCM sample: '40.3899'
Tissue used: 'pure endosperm, no chalazal'
AT1G59610 DL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3 x 10-7 189 38 59 229 83.26% 79.51% 227 288 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.5e-06'
Avg. expression score for this sample: '74.3723'
Avg. expression score in LCM sample: '40.3899'
Tissue used: 'full endosperm'
AT1G59610 DL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.009 x 10-3 802 162 83.20% 964 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59610 DL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.01067 x 10-1 44 46 14 22 48.89% 61.11% 90 36 TAIR8 Avg. embryo expression (dissected): '55.6423'
Avg. embryo expression (LCM): '36.8343'
AT1G59600 ZCW7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.42593 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59600 ZCW7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.38 x 10-4 35 2 94.59% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59600 ZCW7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.16301 x 10-1 15 14 3 5 51.72% 62.50% 29 8 TAIR8 Avg. embryo expression (dissected): '179.338'
Avg. embryo expression (LCM): '238.349'
AT1G59600 ZCW7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.24737 x 10-1 31 10 75.61% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59600 ZCW7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.23107 x 10-1 8 8 2 2 50.00% 50.00% 16 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '78.6387'
Avg. expression score in LCM sample: '53.912'
Tissue used: 'pure endosperm, no chalazal'
AT1G59600 ZCW7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.4453 x 10-1 24 5 21 37 82.76% 63.79% 29 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '82.13'
Avg. expression score in LCM sample: '53.912'
Tissue used: 'full endosperm'
AT1G59590 ZCF37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.84732'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59590 ZCF37 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59590 ZCF37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.493105'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59590 ZCF37 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G59590 ZCF37 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59590 ZCF37 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59580 MPK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59580 MPK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59580 MPK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.2328'
Avg. embryo expression (LCM): '17.9211'
AT1G59580 MPK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '72.6913'
Avg. expression score in LCM sample: '61.9958'
Tissue used: 'pure endosperm, no chalazal'
AT1G59580 MPK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '95.6651'
Avg. expression score in LCM sample: '61.9958'
Tissue used: 'full endosperm'
AT1G59580 MPK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.16562'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.23368'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G59570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59560 ZCF61 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59560 ZCF61 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1438 x 10-1 14 2 87.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59560 ZCF61 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 4 6 0 6 40.00% 100.00% 10 6 TAIR8 Avg. embryo expression (dissected): '20.87'
Avg. embryo expression (LCM): '23.9994'
AT1G59560 ZCF61 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.72489 x 10-1 6 8 4 8 42.86% 66.67% 14 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.3745'
Avg. expression score in LCM sample: '17.9755'
Tissue used: 'full endosperm'
AT1G59560 ZCF61 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1992 x 10-2 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59560 ZCF61 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.13982 x 10-1 8 1 3 7 88.89% 70.00% 9 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '21.3313'
Avg. expression score in LCM sample: '17.9755'
Tissue used: 'pure endosperm, no chalazal'
AT1G59550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.392894'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.25 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.63045'
Avg. embryo expression (LCM): '0'
AT1G59550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59540 ZCF125 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.25692 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59540 ZCF125 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.913 x 10-2 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59540 ZCF125 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 7 3 1 0 70.00% 0.00% 10 1 TAIR8 Avg. embryo expression (dissected): '61.8804'
Avg. embryo expression (LCM): '59.2137'
AT1G59540 ZCF125 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.18357 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59540 ZCF125 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 3 75.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.121473'
Avg. expression score for this sample: '19.5261'
Avg. expression score in LCM sample: '19.5629'
Tissue used: 'pure endosperm, no chalazal'
AT1G59540 ZCF125 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.4415 x 10-2 3 4 8 2 42.86% 20.00% 7 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.121473'
Avg. expression score for this sample: '28.4999'
Avg. expression score in LCM sample: '19.5629'
Tissue used: 'full endosperm'
AT1G59535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59535 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59535 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G59535 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59535 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59530 bZIP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59530 bZIP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59530 bZIP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G59530 bZIP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59530 bZIP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.374727'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59530 bZIP4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59520 CW7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4811 x 10-2 57 8 87.69% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59520 CW7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.55682 x 10-1 28 9 12 21 75.68% 63.64% 37 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.142477'
Avg. expression score for this sample: '43.9486'
Avg. expression score in LCM sample: '32.5412'
Tissue used: 'pure endosperm, no chalazal'
AT1G59520 CW7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.48533 x 10-1 42 8 20 48 84.00% 70.59% 50 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.142477'
Avg. expression score for this sample: '50.6414'
Avg. expression score in LCM sample: '32.5412'
Tissue used: 'full endosperm'
AT1G59520 CW7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.94619 x 10-1 22 17 6 7 56.41% 53.85% 39 13 TAIR8 Avg. embryo expression (dissected): '58.4198'
Avg. embryo expression (LCM): '56.4131'
AT1G59520 CW7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7 x 10-5 59 2 96.72% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59520 CW7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.00824 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'