Displaying data sets 138601 - 138700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G59940 ARR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G59940 ARR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59940 ARR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59940 ARR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59940 ARR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59940 ARR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 0.0 463 1 0 337 99.78% 100.00% 464 337 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '645.624'
Avg. expression score in LCM sample: '1122.66'
Tissue used: 'pure endosperm, no chalazal'
AT1G59930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 6.2 x 10-19 32 0 0 128 100.00% 100.00% 32 128 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '191.757'
Avg. expression score in LCM sample: '1122.66'
Tissue used: 'full endosperm'
AT1G59930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 202 189 51.66% 391 TAIR8 Mutant effect: 'MEG affected by met1'
AT1G59930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.5329 x 10-2 32 1 96.97% 33 TAIR8 Mutant effect: 'MEG affected by met1'
AT1G59930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.16 x 10-4 17 0 0 1 100.00% 100.00% 17 1 TAIR8 Avg. embryo expression (dissected): '21.9771'
Avg. embryo expression (LCM): '0'
AT1G59930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.11386 x 10-1 1418 5 99.65% 1423 TAIR8 Mutant effect: 'MEG affected by met1'
AT1G59920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '121.898'
Avg. expression score in LCM sample: '192.028'
Tissue used: 'pure endosperm, no chalazal'
AT1G59920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.7803'
Avg. expression score in LCM sample: '192.028'
Tissue used: 'full endosperm'
AT1G59920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.3767'
Avg. embryo expression (LCM): '0'
AT1G59920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-16 466 49 90.49% 515 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.47488 x 10-1 275 88 75.76% 363 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7 x 10-8 416 110 165 502 79.09% 75.26% 526 667 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-06'
Avg. expression score for this sample: '463.229'
Avg. expression score in LCM sample: '47.4596'
Tissue used: 'full endosperm'
AT1G59910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5209 x 10-1 62 16 79.49% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 33 32 24 24 50.77% 50.00% 65 48 TAIR8 Avg. embryo expression (dissected): '155.061'
Avg. embryo expression (LCM): '60.2058'
AT1G59910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.20705 x 10-1 120 59 64 100 67.04% 60.98% 179 164 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-06'
Avg. expression score for this sample: '254.007'
Avg. expression score in LCM sample: '47.4596'
Tissue used: 'pure endosperm, no chalazal'
AT1G59900 E1 ALPHA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.39541 x 10-1 105 31 50 75 77.21% 60.00% 136 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.0e-11'
Avg. expression score for this sample: '211.3'
Avg. expression score in LCM sample: '89.5397'
Tissue used: 'pure endosperm, no chalazal'
AT1G59900 E1 ALPHA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.65621 x 10-1 98 34 74.24% 132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59900 E1 ALPHA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.1 x 10-13 390 80 87 344 82.98% 79.81% 470 431 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.0e-11'
Avg. expression score for this sample: '468.394'
Avg. expression score in LCM sample: '89.5397'
Tissue used: 'full endosperm'
AT1G59900 E1 ALPHA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.219 x 10-3 146 65 34 16 69.19% 32.00% 211 50 TAIR8 Avg. embryo expression (dissected): '243.391'
Avg. embryo expression (LCM): '159.883'
AT1G59900 E1 ALPHA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 914 18 98.07% 932 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59900 E1 ALPHA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-5 295 36 89.12% 331 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59890 SNL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-26 2210 528 80.72% 2738 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59890 SNL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.73986 x 10-1 123 109 47 39 53.02% 45.35% 232 86 TAIR8 Avg. embryo expression (dissected): '161.848'
Avg. embryo expression (LCM): '127.143'
AT1G59890 SNL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 22 16 57.89% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59890 SNL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3 x 10-5 42 44 43 17 48.84% 28.33% 86 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006174'
Avg. expression score for this sample: '41.9897'
Avg. expression score in LCM sample: '38.8025'
Tissue used: 'pure endosperm, no chalazal'
AT1G59890 SNL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.56986 x 10-1 115 58 84 149 66.47% 63.95% 173 233 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006174'
Avg. expression score for this sample: '91.5421'
Avg. expression score in LCM sample: '38.8025'
Tissue used: 'full endosperm'
AT1G59890 SNL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.62271 x 10-1 848 692 55.06% 1540 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59885 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59885 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59885 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.39893'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59885 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59885 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G59885 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G59880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59870 PEN3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.66667 x 10-1 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59870 PEN3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 3 0 0 40.00% 5 0 TAIR8 Avg. embryo expression (dissected): '17.1103'
Avg. embryo expression (LCM): '3.70478'
AT1G59870 PEN3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59870 PEN3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.75755'
Avg. expression score in LCM sample: '1.54328'
Tissue used: 'pure endosperm, no chalazal'
AT1G59870 PEN3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 1 1 100.00% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.612'
Avg. expression score in LCM sample: '1.54328'
Tissue used: 'full endosperm'
AT1G59870 PEN3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.33367 x 10-1 131 15 89.73% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59865 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.96 x 10-4 46 1 97.87% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59865 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.17704 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59865 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.9876 x 10-2 98 18 19 17 84.48% 47.22% 116 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.046485'
Avg. expression score for this sample: '399.239'
Avg. expression score in LCM sample: '5.59991'
Tissue used: 'full endosperm'
AT1G59865 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.54528 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59865 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.426 x 10-3 21 4 1 4 84.00% 80.00% 25 5 TAIR8 Avg. embryo expression (dissected): '73.8468'
Avg. embryo expression (LCM): '2.38613'
AT1G59865 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.55036 x 10-1 12 1 4 11 92.31% 73.33% 13 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.046485'
Avg. expression score for this sample: '79.257'
Avg. expression score in LCM sample: '5.59991'
Tissue used: 'pure endosperm, no chalazal'
AT1G59860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22913.9'
Avg. expression score in LCM sample: '63.3774'
Tissue used: 'pure endosperm, no chalazal'
AT1G59860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11236'
Avg. expression score in LCM sample: '63.3774'
Tissue used: 'full endosperm'
AT1G59860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9265.75'
Avg. embryo expression (LCM): '31.4341'
AT1G59860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.34827 x 10-1 19 13 8 6 59.38% 42.86% 32 14 TAIR8 Avg. embryo expression (dissected): '28.6858'
Avg. embryo expression (LCM): '21.0105'
AT1G59850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.43891 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 5 4 8 54.55% 66.67% 11 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.78082'
Avg. expression score in LCM sample: '5.90856'
Tissue used: 'pure endosperm, no chalazal'
AT1G59850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.64484 x 10-1 7 4 3 12 63.64% 80.00% 11 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.922'
Avg. expression score in LCM sample: '5.90856'
Tissue used: 'full endosperm'
AT1G59850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4299 x 10-2 20 1 95.24% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59840 CCB4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.97845 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59840 CCB4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3198 x 10-2 3 5 37.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59840 CCB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.90671 x 10-1 13 3 8 29 81.25% 78.38% 16 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055062'
Avg. expression score for this sample: '7.87903'
Avg. expression score in LCM sample: '1.27872'
Tissue used: 'full endosperm'
AT1G59840 CCB4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.9799 x 10-2 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59840 CCB4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.20978 x 10-1 15 22 4 3 40.54% 42.86% 37 7 TAIR8 Avg. embryo expression (dissected): '14.6111'
Avg. embryo expression (LCM): '21.764'
AT1G59840 CCB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.34614 x 10-1 10 2 0 6 83.33% 100.00% 12 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055062'
Avg. expression score for this sample: '5.35398'
Avg. expression score in LCM sample: '1.27872'
Tissue used: 'pure endosperm, no chalazal'
AT1G59835 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59835 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59835 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59835 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G59835 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59835 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59833 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59833 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G59833 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59833 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G59833 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G59833 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59830 PP2A-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-11 344 49 87.53% 393 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59830 PP2A-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-8 217 31 87.50% 248 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59830 PP2A-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.672 x 10-3 268 68 96 210 79.76% 68.63% 336 306 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.035212'
Avg. expression score for this sample: '134.232'
Avg. expression score in LCM sample: '91.9355'
Tissue used: 'full endosperm'
AT1G59830 PP2A-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.89003 x 10-1 46 20 69.70% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59830 PP2A-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.96758 x 10-1 232 153 67 29 60.26% 30.21% 385 96 TAIR8 Avg. embryo expression (dissected): '203.891'
Avg. embryo expression (LCM): '131.89'
AT1G59830 PP2A-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.27321 x 10-1 178 56 89 99 76.07% 52.66% 234 188 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.035212'
Avg. expression score for this sample: '126.887'
Avg. expression score in LCM sample: '91.9355'
Tissue used: 'pure endosperm, no chalazal'
AT1G59820 ALA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.188 x 10-2 161 66 61 205 70.93% 77.07% 227 266 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.9e-06'
Avg. expression score for this sample: '67.6754'
Avg. expression score in LCM sample: '35.7159'
Tissue used: 'pure endosperm, no chalazal'
AT1G59820 ALA3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5771 x 10-2 64 9 87.67% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G59820 ALA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-4 184 62 92 313 74.80% 77.28% 246 405 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.9e-06'
Avg. expression score for this sample: '97.2279'
Avg. expression score in LCM sample: '35.7159'
Tissue used: 'full endosperm'
AT1G59820 ALA3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.60256 x 10-1 72 108 18 29 40.00% 61.70% 180 47 TAIR8 Avg. embryo expression (dissected): '54.1368'
Avg. embryo expression (LCM): '33.5314'