| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G60680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 35 | 0 | 100.00% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '.996416' Avg. expression score in LCM sample: '1.13174' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.91406' Avg. embryo expression (LCM): '0' |
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| AT1G60670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.83457 x 10-1 | 27 | 38 | 10 | 18 | 41.54% | 64.29% | 65 | 28 | TAIR8 |
Avg. embryo expression (dissected): '60.1913' Avg. embryo expression (LCM): '54.2028' |
||||
| AT1G60670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.3 x 10-4 | 146 | 26 | 84.88% | 172 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.24378 x 10-1 | 116 | 52 | 48 | 145 | 69.05% | 75.13% | 168 | 193 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.125487' Avg. expression score for this sample: '73.4996' Avg. expression score in LCM sample: '19.8275' Tissue used: 'full endosperm' |
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| AT1G60670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.3561 x 10-2 | 22 | 2 | 91.67% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.7 x 10-6 | 179 | 27 | 86.89% | 206 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.90661 x 10-1 | 31 | 24 | 14 | 52 | 56.36% | 78.79% | 55 | 66 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.125487' Avg. expression score for this sample: '43.0627' Avg. expression score in LCM sample: '19.8275' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60660 | CB5LP | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.73374 x 10-1 | 26 | 18 | 10 | 36 | 59.09% | 78.26% | 44 | 46 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.168744' Avg. expression score for this sample: '59.4253' Avg. expression score in LCM sample: '14.6979' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G60660 | CB5LP | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.312 x 10-3 | 16 | 0 | 100.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60660 | CB5LP | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.5 x 10-8 | 67 | 1 | 98.53% | 68 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60660 | CB5LP | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.00329 x 10-1 | 40 | 66 | 3 | 11 | 37.74% | 78.57% | 106 | 14 | TAIR8 |
Avg. embryo expression (dissected): '105.05' Avg. embryo expression (LCM): '136.047' |
|||
| AT1G60660 | CB5LP | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.52563 x 10-1 | 45 | 23 | 38 | 122 | 66.18% | 76.25% | 68 | 160 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.168744' Avg. expression score for this sample: '113.203' Avg. expression score in LCM sample: '14.6979' Tissue used: 'full endosperm' |
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| AT1G60660 | CB5LP | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.9 x 10-5 | 71 | 6 | 92.21% | 77 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60650 | AtRZ-1b | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 582 | 220 | 72.57% | 802 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60650 | AtRZ-1b | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.828 x 10-3 | 243 | 66 | 92 | 205 | 78.64% | 69.02% | 309 | 297 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001125' Avg. expression score for this sample: '252.46' Avg. expression score in LCM sample: '177.433' Tissue used: 'full endosperm' |
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| AT1G60650 | AtRZ-1b | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.3 x 10-9 | 789 | 163 | 82.88% | 952 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60650 | AtRZ-1b | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.7617 x 10-2 | 303 | 109 | 106 | 232 | 73.54% | 68.64% | 412 | 338 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001125' Avg. expression score for this sample: '556.971' Avg. expression score in LCM sample: '177.433' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G60650 | AtRZ-1b | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.878 x 10-3 | 65 | 10 | 86.67% | 75 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60650 | AtRZ-1b | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 339 | 336 | 99 | 95 | 50.22% | 48.97% | 675 | 194 | TAIR8 |
Avg. embryo expression (dissected): '873.214' Avg. embryo expression (LCM): '505.734' |
|||
| AT1G60640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '110.483' Avg. embryo expression (LCM): '247.278' |
|||||
| AT1G60640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 2 | 2 | 3 | 66.67% | 60.00% | 6 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.688168' Avg. expression score for this sample: '149.369' Avg. expression score in LCM sample: '25.2216' Tissue used: 'full endosperm' |
|||||
| AT1G60640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 2 | 50.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.688168' Avg. expression score for this sample: '51.669' Avg. expression score in LCM sample: '25.2216' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.4963 x 10-2 | 7 | 12 | 6 | 4 | 36.84% | 40.00% | 19 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.295784' Avg. expression score for this sample: '4.63049' Avg. expression score in LCM sample: '.676104' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.7723 x 10-2 | 0 | 3 | 0.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.8874 x 10-2 | 1 | 5 | 16.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.78146 x 10-1 | 109 | 113 | 38 | 57 | 49.10% | 60.00% | 222 | 95 | TAIR8 |
Avg. embryo expression (dissected): '81.4549' Avg. embryo expression (LCM): '82.108' |
||||
| AT1G60630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G60630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.12726 x 10-1 | 21 | 5 | 7 | 8 | 80.77% | 53.33% | 26 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.295784' Avg. expression score for this sample: '3.90946' Avg. expression score in LCM sample: '.676104' Tissue used: 'full endosperm' |
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| AT1G60625 | RALFL6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G60625 | RALFL6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60625 | RALFL6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60625 | RALFL6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60625 | RALFL6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60625 | RALFL6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G60620 | RPAC43 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.90529 x 10-1 | 11 | 6 | 0 | 0 | 64.71% | 17 | 0 | TAIR8 |
Avg. embryo expression (dissected): '66.0505' Avg. embryo expression (LCM): '73.3044' |
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| AT1G60620 | RPAC43 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0794 x 10-1 | 49 | 32 | 60.49% | 81 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60620 | RPAC43 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.15093 x 10-1 | 32 | 9 | 15 | 33 | 78.05% | 68.75% | 41 | 48 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.350555' Avg. expression score for this sample: '47.9352' Avg. expression score in LCM sample: '25.8389' Tissue used: 'full endosperm' |
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| AT1G60620 | RPAC43 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60620 | RPAC43 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.31 x 10-4 | 87 | 7 | 92.55% | 94 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60620 | RPAC43 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 2 | 2 | 100.00% | 50.00% | 2 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.350555' Avg. expression score for this sample: '42.1736' Avg. expression score in LCM sample: '25.8389' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.70513 x 10-1 | 235 | 121 | 130 | 279 | 66.01% | 68.22% | 356 | 409 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.660193' Avg. expression score for this sample: '774.488' Avg. expression score in LCM sample: '196.188' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.40212 x 10-1 | 36 | 13 | 73.47% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.5 x 10-9 | 100 | 9 | 91.74% | 109 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 31 | 39 | 5 | 12 | 44.29% | 70.59% | 70 | 17 | TAIR8 |
Avg. embryo expression (dissected): '168.194' Avg. embryo expression (LCM): '181.848' |
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| AT1G60610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.91464 x 10-1 | 293 | 173 | 125 | 330 | 62.88% | 72.53% | 466 | 455 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.660193' Avg. expression score for this sample: '672.749' Avg. expression score in LCM sample: '196.188' Tissue used: 'full endosperm' |
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| AT1G60610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.768 x 10-3 | 3 | 8 | 27.27% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60600 | ABC4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.71942 x 10-1 | 10 | 6 | 62.50% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60600 | ABC4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.53677 x 10-1 | 13 | 6 | 11 | 13 | 68.42% | 54.17% | 19 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.873374' Avg. expression score for this sample: '7.66466' Avg. expression score in LCM sample: '4.2624' Tissue used: 'full endosperm' |
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| AT1G60600 | ABC4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.78209 x 10-1 | 8 | 6 | 57.14% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60600 | ABC4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.62073 x 10-1 | 27 | 4 | 7 | 9 | 87.10% | 56.25% | 31 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.873374' Avg. expression score for this sample: '12.4161' Avg. expression score in LCM sample: '4.2624' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60600 | ABC4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.49447 x 10-1 | 3 | 2 | 60.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60600 | ABC4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.43407 x 10-1 | 67 | 59 | 21 | 20 | 53.17% | 48.78% | 126 | 41 | TAIR8 |
Avg. embryo expression (dissected): '50.3285' Avg. embryo expression (LCM): '50.3222' |
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| AT1G60590 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.1627 x 10-2 | 16 | 0 | 5 | 3 | 100.00% | 37.50% | 16 | 8 | TAIR8 |
Avg. embryo expression (dissected): '9.66811' Avg. embryo expression (LCM): '1.26842' |
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| AT1G60590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.7616' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G60590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G60590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G60590 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G60590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.783124' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G60580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G60580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G60580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G60580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G60580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G60570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '10.9808' Avg. expression score in LCM sample: '14.1247' Tissue used: 'full endosperm' |
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| AT1G60570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 20 | 1 | 95.24% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60570 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.0909 x 10-2 | 2 | 8 | 20.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '18.3001' Avg. expression score in LCM sample: '14.1247' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G60570 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.25082' Avg. embryo expression (LCM): '0' |
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| AT1G60560 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 63 | 71 | 12 | 19 | 47.01% | 61.29% | 134 | 31 | TAIR8 |
Avg. embryo expression (dissected): '67.4791' Avg. embryo expression (LCM): '46.0649' |
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| AT1G60560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.7 x 10-11 | 193 | 15 | 92.79% | 208 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.34419 x 10-1 | 73 | 46 | 47 | 158 | 61.34% | 77.07% | 119 | 205 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.058971' Avg. expression score for this sample: '52.1893' Avg. expression score in LCM sample: '15.9325' Tissue used: 'full endosperm' |
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| AT1G60560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.653 x 10-3 | 35 | 3 | 92.11% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60560 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.50568 x 10-1 | 153 | 49 | 75.74% | 202 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.22631 x 10-1 | 68 | 30 | 21 | 75 | 69.39% | 78.12% | 98 | 96 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.058971' Avg. expression score for this sample: '44.0752' Avg. expression score in LCM sample: '15.9325' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60550 | ECHID | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.02023 x 10-1 | 203 | 129 | 71 | 189 | 61.14% | 72.69% | 332 | 260 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.578341' Avg. expression score for this sample: '186.85' Avg. expression score in LCM sample: '59.9675' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60550 | ECHID | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.52027 x 10-1 | 42 | 14 | 75.00% | 56 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60550 | ECHID | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.2 x 10-5 | 67 | 74 | 47.52% | 141 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60550 | ECHID | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.5015 x 10-1 | 177 | 213 | 61 | 65 | 45.38% | 51.59% | 390 | 126 | TAIR8 |
Avg. embryo expression (dissected): '250.961' Avg. embryo expression (LCM): '153.717' |
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| AT1G60550 | ECHID | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.13052 x 10-1 | 189 | 134 | 87 | 218 | 58.51% | 71.48% | 323 | 305 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.578341' Avg. expression score for this sample: '125.762' Avg. expression score in LCM sample: '59.9675' Tissue used: 'full endosperm' |
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| AT1G60550 | ECHID | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.99398 x 10-1 | 57 | 24 | 70.37% | 81 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G60545 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.5647 x 10-2 | 40 | 28 | 58.82% | 68 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60545 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.9245 x 10-2 | 35 | 2 | 9 | 23 | 94.59% | 71.88% | 37 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.096205' Avg. expression score for this sample: '16.0373' Avg. expression score in LCM sample: '11.4938' Tissue used: 'full endosperm' |
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| AT1G60545 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.4 x 10-5 | 110 | 7 | 94.02% | 117 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60545 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.39449 x 10-1 | 27 | 3 | 22 | 28 | 90.00% | 56.00% | 30 | 50 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.096205' Avg. expression score for this sample: '16.5303' Avg. expression score in LCM sample: '11.4938' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G60545 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.46667 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60545 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.58143 x 10-1 | 16 | 7 | 1 | 2 | 69.57% | 66.67% | 23 | 3 | TAIR8 |
Avg. embryo expression (dissected): '10.3631' Avg. embryo expression (LCM): '15.2712' |
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| AT1G60530 | DRP4A | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '6.82663' Avg. embryo expression (LCM): '15.2838' |
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| AT1G60530 | DRP4A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '7.19153' Avg. expression score in LCM sample: '4.87971' Tissue used: 'full endosperm' |
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| AT1G60530 | DRP4A | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60530 | DRP4A | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60530 | DRP4A | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G60530 | DRP4A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '6.56906' Avg. expression score in LCM sample: '4.87971' Tissue used: 'pure endosperm, no chalazal' |