Displaying data sets 138001 - 138100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G60983 SCRL8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.73331'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G60983 SCRL8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G60983 SCRL8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60983 SCRL8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60983 SCRL8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.34519'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G60983 SCRL8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 7 63.16% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60980 GA20OX4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60980 GA20OX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G60980 GA20OX4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60980 GA20OX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G60980 GA20OX4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 16 5 76.19% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60980 GA20OX4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G60970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2695 x 10-2 48 6 16 4 88.89% 20.00% 54 20 TAIR8 Avg. embryo expression (dissected): '236.072'
Avg. embryo expression (LCM): '239.932'
AT1G60970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0004 34 1 97.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.6 x 10-6 0 10 0.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.57847 x 10-1 140 6 62 8 95.89% 11.43% 146 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.149001'
Avg. expression score for this sample: '493.061'
Avg. expression score in LCM sample: '152.844'
Tissue used: 'full endosperm'
AT1G60970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-15 0 29 0.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.2137 x 10-2 109 0 35 5 100.00% 12.50% 109 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.149001'
Avg. expression score for this sample: '479.824'
Avg. expression score in LCM sample: '152.844'
Tissue used: 'pure endosperm, no chalazal'
AT1G60960 IRT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '445.598'
Avg. expression score in LCM sample: '501.155'
Tissue used: 'pure endosperm, no chalazal'
AT1G60960 IRT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60960 IRT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '58.8328'
Avg. embryo expression (LCM): '31.2332'
AT1G60960 IRT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60960 IRT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '228.588'
Avg. expression score in LCM sample: '501.155'
Tissue used: 'full endosperm'
AT1G60960 IRT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60950 FED A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60950 FED A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3959.54'
Avg. expression score in LCM sample: '3086.33'
Tissue used: 'full endosperm'
AT1G60950 FED A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60950 FED A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6378.58'
Avg. expression score in LCM sample: '3086.33'
Tissue used: 'pure endosperm, no chalazal'
AT1G60950 FED A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10506.5'
Avg. embryo expression (LCM): '6539.87'
AT1G60950 FED A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60940 SNRK2.10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1310 51 96.25% 1361 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60940 SNRK2.10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.45396 x 10-1 66 39 17 15 62.86% 46.88% 105 32 TAIR8 Avg. embryo expression (dissected): '200.732'
Avg. embryo expression (LCM): '80.1112'
AT1G60940 SNRK2.10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.0 x 10-17 621 39 94.09% 660 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60940 SNRK2.10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5 x 10-13 297 67 51 302 81.59% 85.55% 364 353 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.4e-11'
Avg. expression score for this sample: '224.517'
Avg. expression score in LCM sample: '63.3921'
Tissue used: 'full endosperm'
AT1G60940 SNRK2.10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.1 x 10-5 88 4 95.65% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60940 SNRK2.10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.25325 x 10-1 101 39 35 66 72.14% 65.35% 140 101 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.4e-11'
Avg. expression score for this sample: '263.846'
Avg. expression score in LCM sample: '63.3921'
Tissue used: 'pure endosperm, no chalazal'
AT1G60930 RECQ4B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 0 0 80.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.14336'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G60930 RECQ4B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.44851 x 10-1 7 1 2 2 87.50% 50.00% 8 4 TAIR8 Avg. embryo expression (dissected): '2.65292'
Avg. embryo expression (LCM): '2.38613'
AT1G60930 RECQ4B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1043 x 10-2 38 2 95.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60930 RECQ4B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60930 RECQ4B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 0 3 1 100.00% 25.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.57607'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G60930 RECQ4B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60920 AGL55 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60920 AGL55 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.943972'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G60920 AGL55 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60920 AGL55 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.33781'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G60920 AGL55 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.88034 x 10-1 6 19 24.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60920 AGL55 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '2.01963'
Avg. embryo expression (LCM): '4.37038'
AT1G60913 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G60913 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60913 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60913 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G60913 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60913 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G60910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G60910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G60910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G60910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.20785 x 10-1 21 6 77.78% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8088 x 10-2 97 22 53 126 81.51% 70.39% 119 179 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029613'
Avg. expression score for this sample: '254.732'
Avg. expression score in LCM sample: '126.975'
Tissue used: 'full endosperm'
AT1G60900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.06521 x 10-1 122 28 81.33% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.21033 x 10-1 16 4 9 17 80.00% 65.38% 20 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029613'
Avg. expression score for this sample: '351.808'
Avg. expression score in LCM sample: '126.975'
Tissue used: 'pure endosperm, no chalazal'
AT1G60900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.84367 x 10-1 21 13 2 1 61.76% 33.33% 34 3 TAIR8 Avg. embryo expression (dissected): '346.16'
Avg. embryo expression (LCM): '273.35'
AT1G60900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.491 x 10-3 129 21 86.00% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7 x 10-11 323 50 86.60% 373 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.95 x 10-4 69 180 31 50 27.71% 61.73% 249 81 TAIR8 Avg. embryo expression (dissected): '160.537'
Avg. embryo expression (LCM): '144.562'
AT1G60890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.82 x 10-4 162 37 81.41% 199 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.8028 x 10-2 261 187 71 369 58.26% 83.86% 448 440 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078633'
Avg. expression score for this sample: '222.355'
Avg. expression score in LCM sample: '108.103'
Tissue used: 'full endosperm'
AT1G60890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.29858 x 10-1 44 12 78.57% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.6391 x 10-1 64 66 34 144 49.23% 80.90% 130 178 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078633'
Avg. expression score for this sample: '84.3879'
Avg. expression score in LCM sample: '108.103'
Tissue used: 'pure endosperm, no chalazal'
AT1G60880 AGL56 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.430585'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G60880 AGL56 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.14995'
Avg. embryo expression (LCM): '4.15689'
AT1G60880 AGL56 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60880 AGL56 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60880 AGL56 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.92641'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G60880 AGL56 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60870 MEE9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60870 MEE9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1956 x 10-2 17 1 0 5 94.44% 100.00% 18 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005697'
Avg. expression score for this sample: '22.7187'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G60870 MEE9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60870 MEE9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.1677 x 10-1 9 1 0 2 90.00% 100.00% 10 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005697'
Avg. expression score for this sample: '9.04311'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G60870 MEE9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.9249 x 10-2 75 0 100.00% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60870 MEE9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.02478 x 10-1 11 7 7 6 61.11% 46.15% 18 13 TAIR8 Avg. embryo expression (dissected): '45.2696'
Avg. embryo expression (LCM): '27.1768'
AT1G60860 AGD2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 13 11 7 5 54.17% 41.67% 24 12 TAIR8 Avg. embryo expression (dissected): '64.2485'
Avg. embryo expression (LCM): '41.5187'
AT1G60860 AGD2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 26 9 74.29% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60860 AGD2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60860 AGD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.82283 x 10-1 17 0 7 11 100.00% 61.11% 17 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.33728'
Avg. expression score for this sample: '19.3157'
Avg. expression score in LCM sample: '13.8013'
Tissue used: 'full endosperm'
AT1G60860 AGD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.80701 x 10-1 25 4 86.21% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60860 AGD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 3 6 12 70.00% 66.67% 10 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.33728'
Avg. expression score for this sample: '25.0178'
Avg. expression score in LCM sample: '13.8013'
Tissue used: 'pure endosperm, no chalazal'
AT1G60850 ATRPAC42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.6688'
Avg. expression score in LCM sample: '22.3555'
Tissue used: 'pure endosperm, no chalazal'
AT1G60850 ATRPAC42 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60850 ATRPAC42 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.4924'
Avg. embryo expression (LCM): '94.5786'
AT1G60850 ATRPAC42 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60850 ATRPAC42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '37.5561'
Avg. expression score in LCM sample: '22.3555'
Tissue used: 'full endosperm'
AT1G60850 ATRPAC42 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G60840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G60840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'