Displaying data sets 137701 - 137800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G61340 FBS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.696 x 10-3 228 53 81.14% 281 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61340 FBS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.77224 x 10-1 52 78 8 23 40.00% 74.19% 130 31 TAIR8 Avg. embryo expression (dissected): '62.7121'
Avg. embryo expression (LCM): '18.2351'
AT1G61340 FBS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.86724 x 10-1 137 80 38 130 63.13% 77.38% 217 168 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.4e-06'
Avg. expression score for this sample: '127.937'
Avg. expression score in LCM sample: '7.62822'
Tissue used: 'pure endosperm, no chalazal'
AT1G61340 FBS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2 x 10-24 414 32 92.83% 446 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61340 FBS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2 x 10-6 520 219 342 1010 70.37% 74.70% 739 1352 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.4e-06'
Avg. expression score for this sample: '406.598'
Avg. expression score in LCM sample: '7.62822'
Tissue used: 'full endosperm'
AT1G61340 FBS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3616 x 10-2 401 120 76.97% 521 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.29196 x 10-1 229 127 64.33% 356 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.216496'
Avg. embryo expression (LCM): '0'
AT1G61330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.39447'
Avg. expression score in LCM sample: '14.2423'
Tissue used: 'full endosperm'
AT1G61330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.576684'
Avg. expression score in LCM sample: '14.2423'
Tissue used: 'pure endosperm, no chalazal'
AT1G61330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.089 x 10-2 117 49 70.48% 166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 19 36 34.55% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '16.5205'
Tissue used: 'full endosperm'
AT1G61320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.169586'
Avg. expression score in LCM sample: '16.5205'
Tissue used: 'pure endosperm, no chalazal'
AT1G61320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 173 206 45.65% 379 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G61310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 5 2 1 1 71.43% 50.00% 7 2 TAIR8 Avg. embryo expression (dissected): '20.2933'
Avg. embryo expression (LCM): '16.1378'
AT1G61310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.05173 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2432 x 10-1 55 11 13 26 83.33% 66.67% 66 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.305293'
Avg. expression score for this sample: '36.7611'
Avg. expression score in LCM sample: '9.70062'
Tissue used: 'full endosperm'
AT1G61310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.14947 x 10-1 21 5 10 4 80.77% 28.57% 26 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.305293'
Avg. expression score for this sample: '28.9366'
Avg. expression score in LCM sample: '9.70062'
Tissue used: 'pure endosperm, no chalazal'
AT1G61310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.64 x 10-4 74 5 93.67% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.47 x 10-4 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.45607 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 4 11 66.67% 73.33% 3 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.47207'
Avg. expression score in LCM sample: '2.23408'
Tissue used: 'full endosperm'
AT1G61300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '4.90816'
Avg. embryo expression (LCM): '2.38613'
AT1G61300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.83267 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.08291'
Avg. expression score in LCM sample: '2.23408'
Tissue used: 'pure endosperm, no chalazal'
AT1G61290 SYP124 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.447032'
Avg. expression score for this sample: '1.65948'
Avg. expression score in LCM sample: '1.35221'
Tissue used: 'pure endosperm, no chalazal'
AT1G61290 SYP124 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0811 x 10-2 3 7 30.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61290 SYP124 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.05537 x 10-1 42 6 87.50% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61290 SYP124 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61290 SYP124 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.43017 x 10-1 13 0 3 2 100.00% 40.00% 13 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.447032'
Avg. expression score for this sample: '11.8115'
Avg. expression score in LCM sample: '1.35221'
Tissue used: 'full endosperm'
AT1G61290 SYP124 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '3.76654'
Avg. embryo expression (LCM): '0'
AT1G61280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 29 18 13 3 61.70% 18.75% 47 16 TAIR8 Avg. embryo expression (dissected): '55.5969'
Avg. embryo expression (LCM): '60.9593'
AT1G61280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.76033 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.89649 x 10-1 36 15 14 7 70.59% 33.33% 51 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.6859'
Avg. expression score in LCM sample: '46.3719'
Tissue used: 'full endosperm'
AT1G61280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 24 12 66.67% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.80929 x 10-1 20 6 6 21 76.92% 77.78% 26 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.205'
Avg. expression score in LCM sample: '46.3719'
Tissue used: 'pure endosperm, no chalazal'
AT1G61280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.19798 x 10-1 404 141 74.13% 545 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61275 U12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61275 U12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 1 0 100.00% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.12044'
Avg. expression score in LCM sample: '42.2418'
Tissue used: 'full endosperm'
AT1G61275 U12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.66851'
Avg. embryo expression (LCM): '28.8722'
AT1G61275 U12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61275 U12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.42095'
Avg. expression score in LCM sample: '42.2418'
Tissue used: 'pure endosperm, no chalazal'
AT1G61275 U12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.81818 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G61270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.13422'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G61270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G61260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4915 x 10-2 52 38 16 35 57.78% 68.63% 90 51 TAIR8 Avg. embryo expression (dissected): '86.0508'
Avg. embryo expression (LCM): '35.704'
AT1G61260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.2 x 10-6 393 94 80.70% 487 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8 x 10-7 729 401 262 1079 64.51% 80.46% 1130 1341 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000131'
Avg. expression score for this sample: '593.228'
Avg. expression score in LCM sample: '33.4231'
Tissue used: 'full endosperm'
AT1G61260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.06456 x 10-1 242 171 180 424 58.60% 70.20% 413 604 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000131'
Avg. expression score for this sample: '364.758'
Avg. expression score in LCM sample: '33.4231'
Tissue used: 'pure endosperm, no chalazal'
AT1G61260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.6 x 10-13 191 17 91.83% 208 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 466 11 97.69% 477 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61255 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61255 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.10526 x 10-1 7 0 0 3 100.00% 100.00% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.210526'
Avg. expression score for this sample: '296.186'
Avg. expression score in LCM sample: '8.17204'
Tissue used: 'full endosperm'
AT1G61255 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '34.3812'
Avg. embryo expression (LCM): '25.5818'
AT1G61255 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61255 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61255 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.210526'
Avg. expression score for this sample: '115.472'
Avg. expression score in LCM sample: '8.17204'
Tissue used: 'pure endosperm, no chalazal'
AT1G61250 SC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 185 47 120 151 79.74% 55.72% 232 271 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.2e-07'
Avg. expression score for this sample: '141.281'
Avg. expression score in LCM sample: '85.6888'
Tissue used: 'pure endosperm, no chalazal'
AT1G61250 SC3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-30 792 67 92.20% 859 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61250 SC3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-12 605 381 61.36% 986 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61250 SC3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.7117 x 10-2 110 58 65.48% 168 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61250 SC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-9 677 109 190 335 86.13% 63.81% 786 525 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.2e-07'
Avg. expression score for this sample: '254.854'
Avg. expression score in LCM sample: '85.6888'
Tissue used: 'full endosperm'
AT1G61250 SC3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.7207 x 10-2 136 66 43 22 67.33% 33.85% 202 65 TAIR8 Avg. embryo expression (dissected): '126.673'
Avg. embryo expression (LCM): '126.088'
AT1G61240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.45539 x 10-1 34 28 7 7 54.84% 50.00% 62 14 TAIR8 Avg. embryo expression (dissected): '28.0638'
Avg. embryo expression (LCM): '20.8598'
AT1G61240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.91646 x 10-1 33 11 75.00% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.41609 x 10-1 147 86 86 185 63.09% 68.27% 233 271 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.453151'
Avg. expression score for this sample: '77.844'
Avg. expression score in LCM sample: '30.5129'
Tissue used: 'full endosperm'
AT1G61240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9719 x 10-2 55 17 76.39% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.97906 x 10-1 45 31 33 52 59.21% 61.18% 76 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.453151'
Avg. expression score for this sample: '37.2501'
Avg. expression score in LCM sample: '30.5129'
Tissue used: 'pure endosperm, no chalazal'
AT1G61240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-7 142 25 85.03% 167 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61226 MIR846A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61226 MIR846A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.660322'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G61226 MIR846A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.05957'
Avg. embryo expression (LCM): '9.16776'
AT1G61226 MIR846A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61226 MIR846A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.950748'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G61226 MIR846A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61224 MIR842A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61224 MIR842A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.45759'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G61224 MIR842A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61224 MIR842A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61224 MIR842A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G61224 MIR842A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.76186'
Avg. embryo expression (LCM): '11.8427'
AT1G61215 BRD4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.4991 x 10-2 53 24 20 20 68.83% 50.00% 77 40 TAIR8 Avg. embryo expression (dissected): '52.6334'
Avg. embryo expression (LCM): '51.9297'
AT1G61215 BRD4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.5355 x 10-2 10 11 47.62% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61215 BRD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.12826 x 10-1 55 12 23 37 82.09% 61.67% 67 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.680109'
Avg. expression score for this sample: '24.4693'
Avg. expression score in LCM sample: '12.5814'
Tissue used: 'full endosperm'
AT1G61215 BRD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.51554 x 10-1 38 17 15 18 69.09% 54.55% 55 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.680109'
Avg. expression score for this sample: '20.3607'
Avg. expression score in LCM sample: '12.5814'
Tissue used: 'pure endosperm, no chalazal'
AT1G61215 BRD4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.69136 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61215 BRD4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61210 DWA3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-20 236 12 95.16% 248 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G61210 DWA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7657 x 10-2 370 119 216 461 75.66% 68.09% 489 677 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010618'
Avg. expression score for this sample: '90.8577'
Avg. expression score in LCM sample: '26.8531'
Tissue used: 'full endosperm'
AT1G61210 DWA3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.20392 x 10-1 218 196 78 70 52.66% 47.30% 414 148 TAIR8 Avg. embryo expression (dissected): '94.1089'
Avg. embryo expression (LCM): '54.0396'
AT1G61210 DWA3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.42166 x 10-1 92 33 73.60% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'